*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Wheat ABD-Wheat, Consensus SSR, 2004
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Ta-SSR-2004-4A
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Wheat ABD - Wheat, Consensus SSR, 2004 [ View Map Set Info ]
Map Name: Ta-SSR-2004-4A
Map Start: 0
Map Stop: 87.6
Features by Type:
55 locus
55 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 55.       of 3 | Next
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-4A
(Click headers to resort)
Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
Xwmc313-4A locus 82.9 Wheat ABD - Wheat, Conan x Reeder - Conan/Reeder-4A Xwmc313-4A locus 181.93 () Automated name-based View Maps
Wheat ABD - Wheat, Chinese Spring x SQ1 - CS/SQ1-4A Xwmc313-4A locus 29.2 () Automated name-based View Maps
Wheat AB - Durum wheat, Kofa x UC1113 - Kofa/UC1113-4A Xwmc313-4A locus 129.8 () Automated name-based View Maps
Xwmc219-4A locus 87.6 Wheat AB - Durum wheat, Kofa x UC1113 - Kofa/UC1113-4A Xwmc219-4A locus 126.2 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR 2 - Ta-Synthetic/Opata-SSR2-4A Xwmc219-4A locus 160.7 () Automated name-based View Maps
Wheat ABD - Wheat, Chinese Spring x SQ1 - CS/SQ1-4A Xwmc219-4A locus 34.9 () Automated name-based View Maps
Wheat ABD - Wheat, USG3209 x Jaypee - USG3209/Jaypee-4A Xwmc219-4A locus 29.4 () Automated name-based View Maps
Xbarc78-4A locus 70.9 Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-4A Xbarc78-4A locus 83.2 () Automated name-based View Maps
Wheat ABD - Wheat, Chinese Spring x SQ1 - CS/SQ1-4A Xbarc78-4A locus 44.1 () Automated name-based View Maps
Wheat ABD - Wheat, Louise x Penawawa - Louise/Penawawa-4A Xbarc78-4A locus 0 () Automated name-based View Maps
Wheat AB - Durum wheat, Kofa x UC1113 - Kofa/UC1113-4A Xbarc78-4A locus 121.4 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_4A Xbarc78-4A locus 0.9 () Automated name-based View Maps
Xgwm160-4A locus 78.9 Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_4A Xgwm160-4A locus 0.9 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-4A Xgwm160-4A locus 77.1 () Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-4A Xgwm160-4A locus 105.7 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides, SSR - Tturgidum-SSR-4A Xgwm160-4A locus 123.8 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-4A Xgwm160-4A locus 115.5 () Automated name-based View Maps
Wheat ABD - Wheat, Chinese Spring x SQ1 - CS/SQ1-4A Xgwm160-4A locus 45.2 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-4A Xgwm160-4A locus 102.05 () Automated name-based View Maps
Xwmc232-4A locus 68.1 Wheat ABD - Wheat, Synthetic x Opata, SSR 2 - Ta-Synthetic/Opata-SSR2-4A Xwmc232-4A locus 124.4 () Automated name-based View Maps
Wheat ABD - Wheat, Chinese Spring x SQ1 - CS/SQ1-4A Xwmc232-4A locus 52.9 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-4A Xwmc232-4A locus 110.3 () Automated name-based View Maps
Xwmc262-4A locus 60.9 Wheat ABD - Wheat, Synthetic x Opata, SSR 2 - Ta-Synthetic/Opata-SSR2-4A Xwmc262-4A locus 120.3 () Automated name-based View Maps
Wheat ABD - Wheat, Chinese Spring x SQ1 - CS/SQ1-4A Xwmc262-4A locus 79.7 () Automated name-based View Maps
Wheat AB - Durum wheat, Kofa x UC1113 - Kofa/UC1113-4A Xwmc262-4A locus 103.1 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-4A Xwmc262-4A locus 108.8 () Automated name-based View Maps
Xwmc258-4A locus 38.9 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-4A Xwmc258-4A locus 67.5 () Automated name-based View Maps
Wheat ABD - Wheat, Chinese Spring x SQ1 - CS/SQ1-4A Xwmc258-4A locus 91 () Automated name-based View Maps
Wheat AB - Durum wheat, Kofa x UC1113 - Kofa/UC1113-4A Xwmc258-4A locus 57.8 () Automated name-based View Maps
Wheat ABD - Wheat, P91193D1 x P92201D5 - P91193D1/P92201D5-4A Xwmc258-4A locus 67.3 () Automated name-based View Maps
Xwmc468-4A locus 37.7 Wheat ABD - Wheat, Chinese Spring x SQ1 - CS/SQ1-4A Xwmc468-4A locus 98.2 () Automated name-based View Maps
Xgwm397-4A locus 18.4 Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-4A Xgwm397-4A locus 41.3 () Automated name-based View Maps
Wheat ABD - Wheat, P91193D1 x P92201D5 - P91193D1/P92201D5-4A Xgwm397-4A locus 21.9 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides, SSR - Tturgidum-SSR-4A Xgwm397-4A locus 21.1 () Automated name-based View Maps
Wheat ABD - Wheat, Forno x Oberkulmer - Triticum-FxO-4A Xgwm397-4A locus 7 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-4A Xgwm397-4A locus 45.5 () Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-4A Xgwm397-4A locus 10 () Automated name-based View Maps
Wheat ABD - Wheat, Chinese Spring x SQ1 - CS/SQ1-4A Xgwm397-4A locus 134.8 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_4A Xgwm397-4A locus 0.62 () Automated name-based View Maps
Wheat ABD - Wheat, Courtot x Chinese Spring, GPW - Ta-Courtot/CS-GPW-4A Xgwm397-4A locus -48.8 () Automated name-based View Maps
Wheat ABD - Wheat, Conan x Reeder - Conan/Reeder-4A Xgwm397-4A locus 31.6 () Automated name-based View Maps
Wheat A - T. boeoticum x monococcum - T.b.xT.m.-4A Xgwm397-4A locus 3.3 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-4A Xgwm397-4A locus 39.6 () Automated name-based View Maps
Xwmc420-4A locus 7.1 Wheat ABD - Wheat, Chinese Spring x SQ1 - CS/SQ1-4A Xwmc420-4A locus 164.1 () Automated name-based View Maps
Wheat ABD - Wheat, Conan x Reeder - Conan/Reeder-4A Xwmc420-4A locus 18.45 () Automated name-based View Maps
Xwmc757-4A locus 10.3 Wheat ABD - Wheat, Conan x Reeder - Conan/Reeder-4A Xwmc757-4A locus 0 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 4A wmc757 locus 31.5 () Automated name-based View Maps
Wheat ABD - Wheat, Yr Update, 2021 - Wheat_Yr_2021-4A wmc757 locus 67.24 (cM) Automated name-based View Maps
Xwmc516-4A locus 1.9 Wheat ABD - Wheat, Conan x Reeder - Conan/Reeder-4A Xwmc516-4A locus 12.77 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 4A wmc516 locus 18.2 () Automated name-based View Maps
Wheat ABD - Wheat, Yr Update, 2021 - Wheat_Yr_2021-4A wmc516 locus 38.98 (cM) Automated name-based View Maps
Xwmc491-4A locus 7.6 Wheat ABD - Wheat, Louise x Penawawa - Louise/Penawawa-4A Xwmc491-4A locus 91.8 () Automated name-based View Maps
Wheat ABD - Wheat, Conan x Reeder - Conan/Reeder-4A Xwmc491-4A locus 16.48 () Automated name-based View Maps
Xwmc650-4A locus 24.9 Wheat ABD - Wheat, Yr Update, 2021 - Wheat_Yr_2021-4A wmc650 locus 96.27 (cM) Automated name-based View Maps
Wheat ABD - Wheat-2014-Consensus-Ug99-Update - Wheat-2014-Consensus-Ug99-Update wmc650 locus 35.05 () Automated name-based View Maps
Wheat ABD - Wheat, Conan x Reeder - Conan/Reeder-4A Xwmc650-4A locus 43.29 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 4A wmc650 locus 45 () Automated name-based View Maps
Wheat ABD - Wheat_Consensus_2014_Ug99_Rust - Wheat_Consensus_2014_Ug99_Rust_4 wmc650 locus 35.05 () Automated name-based View Maps
Xwmc161-4A locus 46 Wheat ABD - Wheat, Conan x Reeder - Conan/Reeder-4A Xwmc161-4A locus 79.82 () Automated name-based View Maps
Xgwm494-4A locus 49.1 Wheat A - T. boeoticum x monococcum - T.b.xT.m.-4A Xgwm494-4A locus 99.5 () Automated name-based View Maps
Wheat ABD - Wheat, Courtot x Chinese Spring, GPW - Ta-Courtot/CS-GPW-4A Xgwm494-4A locus -64.3 () Automated name-based View Maps
Wheat ABD - Wheat, Conan x Reeder - Conan/Reeder-4A Xgwm494-4A locus 86.62 () Automated name-based View Maps
Xwmc718-4A locus 57 Wheat ABD - Wheat, Conan x Reeder - Conan/Reeder-4A Xwmc718-4A locus 106.22 () Automated name-based View Maps
Wheat AB - Durum wheat, Kofa x UC1113 - Kofa/UC1113-4A Xwmc718-4A locus 78.7 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 4A wmc718 locus 61.5 () Automated name-based View Maps
Xwmc760-4A locus 58.2 Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 4A wmc760 locus 61.9 () Automated name-based View Maps
Wheat ABD - Wheat, Yr Update, 2021 - Wheat_Yr_2021-4A wmc760 locus 132.36 (cM) Automated name-based View Maps
Wheat ABD - Wheat, Conan x Reeder - Conan/Reeder-4A Xwmc760-4A locus 114.74 () Automated name-based View Maps
Xbarc70-4A locus 70.6 Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-4A Xbarc70-4A locus 111.9 () Automated name-based View Maps
Wheat ABD - Wheat, Conan x Reeder - Conan/Reeder-4A Xbarc70-4A locus 129.43 () Automated name-based View Maps
Xwmc722-4A locus 83.9 Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 4A wmc722 locus 89 () Automated name-based View Maps
Wheat AB - Durum wheat, Kofa x UC1113 - Kofa/UC1113-4A Xwmc722-4A locus 127.4 () Automated name-based View Maps
Wheat ABD - Wheat, Conan x Reeder - Conan/Reeder-4A Xwmc722-4A locus 178.68 () Automated name-based View Maps
Xgwm610-4A locus 12.1 Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_4A Xgwm610-4A locus -0.1 () Automated name-based View Maps
Wheat ABD - Wheat, Courtot x Chinese Spring, GPW - Ta-Courtot/CS-GPW-4A Xgwm610-4A locus -42.7 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides, SSR - Tturgidum-SSR-4A Xgwm610-4A locus 12.9 () Automated name-based View Maps
Wheat AB - T. turgidum, Omrabi5 x dicoccoides, QTL - Tt-Oxd-QTL-4A Xgwm610-4A locus 61 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-4A Xgwm610-4A locus 27.85 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-4A Xgwm610-4A locus 30.4 () Automated name-based View Maps
Xcfd2-4A locus 81 Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_4A Xcfd2-4A locus -0.88 () Automated name-based View Maps
Wheat ABD - Wheat, Courtot x Chinese Spring, GPW - Ta-Courtot/CS-GPW-4A Xcfd2-4A locus 4.5 () Automated name-based View Maps
Xgwm165-4A locus 2.4 Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_4A Xgwm165-4A locus -0.88 () Automated name-based View Maps
Wheat ABD - Wheat, Courtot x Chinese Spring, GPW - Ta-Courtot/CS-GPW-4A Xgwm165-4A locus 34.1 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-4A Xgwm165-4A locus 12.2 () Automated name-based View Maps
Wheat AB - T. turgidum, Omrabi5 x dicoccoides, QTL - Tt-Oxd-QTL-4A Xgwm165-4A locus 0 () Automated name-based View Maps
Wheat AB - Durum wheat, Kofa x UC1113 - Kofa/UC1113-4A Xgwm165-4A locus 0 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-4A Xgwm165-4A locus 17.9 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-4A Xgwm165-4A locus 19.4 () Automated name-based View Maps
Xcfd71-4A locus 8.4 Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_4A Xcfd71-4A locus -0.42 () Automated name-based View Maps
Wheat A - T. boeoticum x monococcum - T.b.xT.m.-4A Xcfd71-4A locus 59.5 () Automated name-based View Maps
Wheat ABD - Wheat, Courtot x Chinese Spring, GPW - Ta-Courtot/CS-GPW-4A Xcfd71-4A locus 35.2 () Automated name-based View Maps
Xcfa2256-4A locus 10 Wheat ABD - Wheat, Courtot x Chinese Spring, GPW - Ta-Courtot/CS-GPW-4A Xcfa2256-4A locus 38.5 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 4A cfa2256 locus 23.9 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_4A Xcfa2256-4A locus -0.88 () Automated name-based View Maps
Wheat ABD - Wheat, Louise x Penawawa - Louise/Penawawa-4A Xcfa2256-4A locus 97.9 () Automated name-based View Maps
Wheat ABD - Wheat, Yr Update, 2021 - Wheat_Yr_2021-4A cfa2256 locus 51.07 (cM) Automated name-based View Maps

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.