*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Wheat ABD-Wheat, Consensus SSR, 2004
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Ta-SSR-2004-5B
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Wheat ABD - Wheat, Consensus SSR, 2004 [ View Map Set Info ]
Map Name: Ta-SSR-2004-5B
Map Start: 0
Map Stop: 173
Features by Type:
77 locus
77 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 77.       of 4 | Next
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-5B
(Click headers to resort)
Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
Xgwm234-5B locus 38.1 Wheat AB - T. turgidum, JK x Cham1, 2 - Tturgidum-JKxC2-5B Xgwm234-5B locus 91.6 () Automated name-based View Maps
Wheat AB - T. turgidum, Omrabi5 x dicoccoides, QTL - Tt-Oxd-QTL-5B Xgwm234-5B locus 57.3 () Automated name-based View Maps
Wheat AB - Durum wheat, Kofa x UC1113 - Kofa/UC1113-5B Xgwm234-5B locus 0 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-5B Xgwm234-5B locus 1.8 () Automated name-based View Maps
Wheat ABD - Wheat, P91193D1 x P92201D5 - P91193D1/P92201D5-5B Xgwm234-5B locus 0 () Automated name-based View Maps
Wheat ABD - Wheat, Chinese Spring x SQ1 - CS/SQ1-5B Xgwm234-5B locus 6.2 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_5B Xgwm234-5B locus -0.76 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-5B Xgwm234-5B locus 1 () Automated name-based View Maps
Wheat AB - T. turgidum, JK x Cham1 - Tturgidum-JKxC-5B Xgwm234-5B locus 0 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-5B Xgwm234-5B locus -5 () Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-5B Xgwm234-5B locus 0 () Automated name-based View Maps
Xbarc109-5B locus 60.9 Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-5B Xbarc109-5B locus 29.7 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_5B Xbarc109-5B locus 0.78 () Automated name-based View Maps
Wheat ABD - Wheat, Louise x Penawawa - Louise/Penawawa-5B Xbarc109-5B locus 31.4 () Automated name-based View Maps
Wheat ABD - Wheat, Chinese Spring x SQ1 - CS/SQ1-5B Xbarc109-5B locus 51.2 () Automated name-based View Maps
Xwmc73-5B locus 62.5 Wheat ABD - Wheat, Chinese Spring x SQ1 - CS/SQ1-5B Xwmc73-5B locus 51.2 () Automated name-based View Maps
Wheat ABD - Wheat, Louise x Penawawa - Louise/Penawawa-5B Xwmc73-5B locus 28.9 () Automated name-based View Maps
Wheat ABD - Wheat_Yr79_2018 - Wheat_Yr79_2018-5BS Xwmc73-5B locus 33.7 (cM) Automated name-based View Maps
Xgwm499-5B locus 75.1 Wheat AB - T. turgidum, Messapia x dicoccoides, SSR - Tturgidum-SSR-5B Xgwm499-5B locus 32.9 () Automated name-based View Maps
Wheat ABD - Wheat, Chinese Spring x SQ1 - CS/SQ1-5B Xgwm499-5B locus 75.7 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-5B Xgwm499-5B locus 47 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_5B Xgwm499-5B locus 0.65 () Automated name-based View Maps
Wheat AB - T. turgidum, Omrabi5 x dicoccoides, QTL - Tt-Oxd-QTL-5B Xgwm499-5B locus 109.6 () Automated name-based View Maps
Wheat AB - Durum wheat, Kofa x UC1113 - Kofa/UC1113-5B Xgwm499-5B locus 66.5 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-5B Xgwm499-5B locus 65.7 () Automated name-based View Maps
Wheat ABD - Wheat_Yr79_2018 - Wheat_Yr79_2018-5BS Xgwm499-5B locus 61.4 (cM) Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-5B Xgwm499-5B locus 45.6 () Automated name-based View Maps
Wheat ABD - Wheat, Conan x Reeder - Conan/Reeder-5B Xgwm499-5B locus 43.3 () Automated name-based View Maps
Xgwm271-5B locus 112.3 Wheat ABD - Wheat, Courtot x Chinese Spring, GPW - Ta-Courtot/CS-GPW-5B Xgwm271-5B locus 93.4 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-5B Xgwm271-5B locus 78 () Automated name-based View Maps
Wheat ABD - Wheat, Chinese Spring x SQ1 - CS/SQ1-5B Xgwm271-5B locus 122 () Automated name-based View Maps
Wheat ABD - Wheat, Cadmium 5B, 2010 - Wheat_W9262-260D3/Kofa-5B Xgwm271-5B locus 0 (cM) Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_5B Xgwm271-5B locus 0.9 () Automated name-based View Maps
Xgwm408-5B locus 117.2 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-5B Xgwm408-5B locus 95.2 () Automated name-based View Maps
Wheat ABD - Wheat, USG3209 x Jaypee - USG3209/Jaypee-5B Xgwm408-5B locus 0 () Automated name-based View Maps
Wheat ABD - 5BL, CS, 0.75-0.79 interval - 5BL, CS, 0.75-0.79 interval Xgwm408-5B locus 14.4 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-5B Xgwm408-5B locus 111 () Automated name-based View Maps
Wheat AB - Durum wheat, Kofa x UC1113 - Kofa/UC1113-5B Xgwm408-5B locus 100.3 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-5B Xgwm408-5B locus 89.2 () Automated name-based View Maps
Wheat ABD - Wheat, Chinese Spring x SQ1 - CS/SQ1-5B Xgwm408-5B locus 133.7 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides, SSR - Tturgidum-SSR-5B Xgwm408-5B locus 87.5 () Automated name-based View Maps
Xbarc140-5B locus 127.2 Wheat ABD - Wheat, Chinese Spring x SQ1 - CS/SQ1-5B Xbarc140-5B locus 150.5 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-5B Xbarc140-5B locus 100.4 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_5B Xbarc140-5B locus 0.65 () Automated name-based View Maps
Xwmc537-5B locus 84 Wheat ABD - Wheat, Louise x Penawawa - Louise/Penawawa-5B Xwmc537-5B locus 68 () Automated name-based View Maps
Wheat ABD - Wheat, Conan x Reeder - Conan/Reeder-5B Xwmc537-5B locus 41.49 () Automated name-based View Maps
Xgwm371-5B locus 72.6 Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-5B Xgwm371-5B locus 62.25 () Automated name-based View Maps
Wheat ABD - Wheat, Louise x Penawawa - Louise/Penawawa-5B Xgwm371-5B locus 52.5 () Automated name-based View Maps
Wheat ABD - Wheat, Conan x Reeder - Conan/Reeder-5B Xgwm371-5B locus 62.67 () Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-5B Xgwm371-5B locus 46.9 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_5B Xgwm371-5B locus 0.65 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-5B Xgwm371-5B locus 32.4 () Automated name-based View Maps
Wheat AB - Durum wheat, Kofa x UC1113 - Kofa/UC1113-5B Xgwm371-5B locus 51.1 () Automated name-based View Maps
Xgwm604-5B locus 123.7 Wheat ABD - Wheat, Conan x Reeder - Conan/Reeder-5B Xgwm604-5B locus 107.1 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_5B Xgwm604-5B locus 0.9 () Automated name-based View Maps
Wheat AB - T. turgidum, Omrabi5 x dicoccoides, QTL - Tt-Oxd-QTL-5B Xgwm604-5B locus 179.2 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-5B Xgwm604-5B locus 101.5 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-5B Xgwm604-5B locus 116.2 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides, SSR - Tturgidum-SSR-5B Xgwm604-5B locus 95.5 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-5B Xgwm604-5B locus 94.9 () Automated name-based View Maps
Xgdm146-5B locus 53.5 Wheat ABD - Wheat, Yr Update, 2021 - Wheat_Yr_2021-5B gdm146 locus 41.97 (cM) Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 5B gdm146 locus 17.7 () Automated name-based View Maps
Xgwm274-5B locus 63.6 Wheat ABD - Wheat, Courtot x Chinese Spring, GPW - Ta-Courtot/CS-GPW-5B Xgwm274-5B locus 15.9 () Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-5B Xgwm274-5B locus 31 () Automated name-based View Maps
Xcfd2-5B locus 74.3 Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_5B Xcfd2-5B locus 0.42 () Automated name-based View Maps
Wheat ABD - Wheat, Courtot x Chinese Spring, GPW - Ta-Courtot/CS-GPW-5B Xcfd2-5B locus 50.9 () Automated name-based View Maps
Xwmc149-5B locus 39.3 Wheat ABD - Wheat, Synthetic x Opata, SSR 2 - Ta-Synthetic/Opata-SSR2-5B Xwmc149-5B locus 11 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-5B Xwmc149-5B locus 12.2 () Automated name-based View Maps
Wheat AB - Durum wheat, Kofa x UC1113 - Kofa/UC1113-5B Xwmc149-5B locus 15.1 () Automated name-based View Maps
Xgwm66-5B locus 58.7 Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_5B Xgwm66-5B locus -0.91 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-5B Xgwm66-5B locus 27.9 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-5B Xgwm66-5B locus 26.9 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-5B Xgwm66-5B locus 23.7 () Automated name-based View Maps
Xgwm540-5B locus 59 Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-5B Xgwm540-5B locus 27.9 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-5B Xgwm540-5B locus 25.1 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-5B Xgwm540-5B locus 27.5 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_5B Xgwm540-5B locus -0.5 () Automated name-based View Maps
Wheat ABD - Wheat_Yr79_2018 - Wheat_Yr79_2018-5BS Xgwm540-5B locus 37 (cM) Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-5B Xgwm540-5B locus 29.2 () Automated name-based View Maps
Xgwm191-5B locus 59.3 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-5B Xgwm191-5B locus 25.4 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-5B Xgwm191-5B locus 26.65 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-5B Xgwm191-5B locus 26.7 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_5B Xgwm191-5B locus -0.76 () Automated name-based View Maps
Xgwm159-5B locus 56.8 Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-5B Xgwm159-5B locus 29 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_5B Xgwm159-5B locus -0.22 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-5B Xgwm159-5B locus 25.6 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-5B Xgwm159-5B locus 26.45 () Automated name-based View Maps
Xcfa2070-5B locus 62.7 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-5B Xcfa2070-5B locus 27.5 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_5B Xcfa2070-5B locus 0.42 () Automated name-based View Maps
Xgwm68-5B locus 64.3 Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-5B Xgwm68-5B locus 39.65 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-5B Xgwm68-5B locus 30.3 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-5B Xgwm68-5B locus 28.8 () Automated name-based View Maps
Xgwm67-5B locus 65.2 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-5B Xgwm67-5B locus 30.9 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-5B Xgwm67-5B locus 33.6 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-5B Xgwm67-5B locus 39.45 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_5B Xgwm67-5B locus 0.14 () Automated name-based View Maps
Xgwm335-5B locus 67.6 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-5B Xgwm335-5B locus 33 () Automated name-based View Maps
Wheat AB - Durum wheat, Kofa x UC1113 - Kofa/UC1113-5B Xgwm335-5B locus 41.2 () Automated name-based View Maps
Wheat ABD - Wheat, Louise x Penawawa - Louise/Penawawa-5B Xgwm335-5B locus 42.4 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-5B Xgwm335-5B locus 32.6 () Automated name-based View Maps
Wheat AB - T. turgidum, Omrabi5 x dicoccoides, QTL - Tt-Oxd-QTL-5B Xgwm335-5B locus 90.6 () Automated name-based View Maps
Wheat ABD - Wheat, P91193D1 x P92201D5 - P91193D1/P92201D5-5B Xgwm335-5B locus 86 () Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-5B Xgwm335-5B locus 36.1 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_5B Xgwm335-5B locus 0.42 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-5B Xgwm335-5B locus 37.2 () Automated name-based View Maps
Xgwm213-5B locus 67.9 Wheat AB - T. turgidum, Messapia x dicoccoides, SSR - Tturgidum-SSR-5B Xgwm213-5B locus 13.3 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_5B Xgwm213-5B locus 0.42 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-5B Xgwm213-5B locus 34.1 () Automated name-based View Maps
Wheat ABD - Wheat_Yr79_2018 - Wheat_Yr79_2018-5BS Xgwm213-5B locus 43.4 (cM) Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-5B Xgwm213-5B locus 32.5 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-5B Xgwm213-5B locus 37.2 () Automated name-based View Maps
Wheat ABD - Wheat, Louise x Penawawa - Louise/Penawawa-5B Xgwm213-5B locus 42.1 () Automated name-based View Maps
Xgwm554-5B locus 88.5 Wheat AB - T. turgidum, Omrabi5 x dicoccoides, QTL - Tt-Oxd-QTL-5B Xgwm554-5B locus 143 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-5B Xgwm554-5B locus 63.1 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides, SSR - Tturgidum-SSR-5B Xgwm554-5B locus 47.6 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_5B Xgwm554-5B locus 0.78 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-5B Xgwm554-5B locus 81.55 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-5B Xgwm554-5B locus 64 () Automated name-based View Maps
Xcfd7-5B locus 94.1 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-5B Xcfd7-5B locus 70.8 () Automated name-based View Maps

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.