*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Wheat ABD-Wheat, Consensus SSR, 2004
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Ta-SSR-2004-5D
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
(Hide Advanced Menu)

Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Wheat ABD - Wheat, Consensus SSR, 2004 [ View Map Set Info ]
Map Name: Ta-SSR-2004-5D
Map Start: 0
Map Stop: 123
Features by Type:
79 locus
79 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 26 to 50 of 79.       Previous | of 4 | Next
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-5D
(Click headers to resort)		 Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
Xgdm138-5D locus 37.8 Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_5D Xgdm138-5D locus 0.3 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR-D - Ta-Synthetic/Opata-SSR_D-5D Xgdm138-5D locus 61.2 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-5D Xgdm138-5D locus 60.7 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 5D gdm138 locus 39.6 () Automated name-based View Maps
Xgdm153-5D locus 33 Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 5D gdm153 locus 35.9 () Automated name-based View Maps
Wheat ABD - Wheat, Yr Update, 2021 - Wheat_Yr_2021-5D gdm153 locus 67.34 (cM) Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR-D - Ta-Synthetic/Opata-SSR_D-5D Xgdm153-5D locus 84.3 () Automated name-based View Maps
Wheat ABD - Wheat, Axiom 2018, Consensus - Wheat-Axiom2018-Cons-2A AX-94641302 locus (cM) Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-5D Xgdm153-5D locus 75.6 () Automated name-based View Maps
Xgdm63-5D locus 88 Wheat ABD - Wheat, Grandin x BR34 - Ta-Grandin/BR34-5D Xgdm63-5D locus 95 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-5D Xgdm63-5D locus 153.2 () Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-5D Xgdm63-5D locus 202.6 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_5D Xgdm63-5D locus 0.3 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR-D - Ta-Synthetic/Opata-SSR_D-5D Xgdm63-5D locus 166.8 () Automated name-based View Maps
Xgdm136-5D locus 46.8 No other positions
Xcfa2104-5D locus 13.7 Wheat ABD - Wheat, USG3209 x Jaypee - USG3209/Jaypee-5D Xcfa2104-5D locus 55.1 () Automated name-based View Maps
Wheat ABD - Wheat, Courtot x Chinese Spring, GPW - Ta-Courtot/CS-GPW-5D Xcfa2104-5D locus 28.3 () Automated name-based View Maps
Xcfd78-5D locus 19.6 Wheat ABD - Wheat, Courtot x Chinese Spring, GPW - Ta-Courtot/CS-GPW-5D Xcfd78-5D locus 50.6 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-5D Xcfd78-5D locus 17 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_5D Xcfd78-5D locus -0.32 () Automated name-based View Maps
Xcfd67-5D locus 25.7 Wheat ABD - Wheat, Courtot x Chinese Spring, GPW - Ta-Courtot/CS-GPW-5D Xcfd67-5D locus 50.8 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-5D Xcfd67-5D locus 19.1 () Automated name-based View Maps
Xgwm358-5D locus 26.2 Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_5D Xgwm358-5D locus -0.32 () Automated name-based View Maps
Wheat ABD - Wheat, Courtot x Chinese Spring, GPW - Ta-Courtot/CS-GPW-5D Xgwm358-5D locus 51.3 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-5D Xgwm358-5D locus 4.7 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-5D Xgwm358-5D locus 21.9 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-5D Xgwm358-5D locus 18.9 () Automated name-based View Maps
Xcfd40-5D locus 31.1 Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_5D Xcfd40-5D locus 0.3 () Automated name-based View Maps
Wheat ABD - Wheat, Courtot x Chinese Spring, GPW - Ta-Courtot/CS-GPW-5D Xcfd40-5D locus 54.1 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-5D Xcfd40-5D locus 23.3 () Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-5D Xcfd40-5D locus 31.8 () Automated name-based View Maps
Wheat ABD - Wheat, Louise x Penawawa - Louise/Penawawa-5D Xcfd40-5D locus 12.5 () Automated name-based View Maps
Xcfd26-5D locus 50.8 Wheat ABD - Wheat, Courtot x Chinese Spring, GPW - Ta-Courtot/CS-GPW-5D Xcfd26-5D locus 142.8 () Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-5D Xcfd26-5D locus 96.5 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_5D Xcfd26-5D locus 0.75 () Automated name-based View Maps
Xcfd12-5D locus 54.9 Wheat ABD - Wheat, Courtot x Chinese Spring, GPW - Ta-Courtot/CS-GPW-5D Xcfd12-5D locus 163.2 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-5D Xcfd12-5D locus 84.3 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_5D Xcfd12-5D locus 0.67 () Automated name-based View Maps
Xcfd19-5D locus 76.1 Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_5D Xcfd19-5D locus 0.88 () Automated name-based View Maps
Wheat ABD - Wheat, Courtot x Chinese Spring, GPW - Ta-Courtot/CS-GPW-5D Xcfd19-5D locus 186.7 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-5D Xcfd19-5D locus 126.5 () Automated name-based View Maps
Xcfd2-5D locus 85.5 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-5D Xcfd2-5D locus 157.8 () Automated name-based View Maps
Wheat ABD - Wheat, Courtot x Chinese Spring, GPW - Ta-Courtot/CS-GPW-5D Xcfd2-5D locus 210.2 () Automated name-based View Maps
Xcfd10-5D locus 98.4 Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 5D cfd10 locus 85.1 () Automated name-based View Maps
Wheat ABD - Wheat, Courtot x Chinese Spring, GPW - Ta-Courtot/CS-GPW-5D Xcfd10-5D locus 223.6 () Automated name-based View Maps
Xcfd189-5D locus 14.6 Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_5D Xcfd189-5D locus -0.32 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-5D Xcfd189-5D locus 14.4 () Automated name-based View Maps
Xcfd266-5D locus 34.4 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-5D Xcfd266-5D locus 63.1 () Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-5D Xcfd266-5D locus 58.9 () Automated name-based View Maps
Xgwm639-5D locus 48.1 Wheat ABD - Wheat, Grandin x BR34 - Ta-Grandin/BR34-5D Xgwm639-5D locus 0 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-5D Xgwm639-5D locus 63.9 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-5D Xgwm639-5D locus 70 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_5D Xgwm639-5D locus 0.3 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-5D Xgwm639-5D locus 53.45 () Automated name-based View Maps
Xgwm121-5D locus 61.3 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-5D Xgwm121-5D locus 110.3 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-5D Xgwm121-5D locus 98.4 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_5D Xgwm121-5D locus 0.88 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-5D Xgwm121-5D locus 102 () Automated name-based View Maps
Xgwm271-5D locus 61.7 Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-5D Xgwm271-5D locus 98.3 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-5D Xgwm271-5D locus 101.8 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-5D Xgwm271-5D locus 111.6 () Automated name-based View Maps
Xcfd183-5D locus 80.4 Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 5D cfd183 locus 71.8 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-5D Xcfd183-5D locus 126.8 () Automated name-based View Maps
Wheat ABD - Wheat, Louise x Penawawa - Louise/Penawawa-5D Xcfd183-5D locus 175.2 () Automated name-based View Maps
Wheat ABD - Wheat, Axiom 2018, Consensus - Wheat-Axiom2018-Cons-2A AX-94417710 locus (cM) Automated name-based View Maps
Wheat ABD - Wheat, Yr Update, 2021 - Wheat_Yr_2021-5D cfd183 locus 134.65 (cM) Automated name-based View Maps
Xcfa2141-5D locus 79.4 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-5D Xcfa2141-5D locus 134.8 () Automated name-based View Maps
Xgdm133-5D locus 84.1 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-5D Xgdm133-5D locus 151 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 5D gdm133 locus 74.5 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 5B gdm133 locus 75.7 () Automated name-based View Maps
Xcfd86-5D locus 91 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-5D Xcfd86-5D locus 154.2 () Automated name-based View Maps
Xcfd283-5D locus 90.2 Wheat ABD - Wheat, Louise x Penawawa - Louise/Penawawa-5D Xcfd283-5D locus 187.2 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-5D Xcfd283-5D locus 155.3 () Automated name-based View Maps
Xwmc161-5D locus 106.5 Wheat ABD - Wheat, Synthetic x Opata, SSR 2 - Ta-Synthetic/Opata-SSR2-5D Xwmc161-5D locus 195.5 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-5D Xwmc161-5D locus 188.3 () Automated name-based View Maps

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.