*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Wheat ABD-Wheat, Consensus SSR, 2004
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Ta-SSR-2004-6D
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Wheat ABD - Wheat, Consensus SSR, 2004 [ View Map Set Info ]
Map Name: Ta-SSR-2004-6D
Map Start: 0.00
Map Stop: 109.70
Features by Type:
35 locus
35 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 35.       of 2 | Next
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-6D
(Click headers to resort)
Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
Xcfd49-6D locus 0.00 Wheat ABD - Wheat, Chinese Spring x SQ1 - CS/SQ1-6D Xcfd49-6D locus 0.00 () Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-6D Xcfd49-6D locus 0.00 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-6D Xcfd49-6D locus 10.30 () Automated name-based View Maps
Wheat ABD - Wheat, Louise x Penawawa - Louise/Penawawa-6D Xcfd49-6D locus 0.00 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_6D Xcfd49-6D locus -0.99 () Automated name-based View Maps
Xbarc173-6D locus 15.60 Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_6D Xbarc173-6D locus -0.99 () Automated name-based View Maps
Wheat ABD - Wheat, Grandin x BR34 - Ta-Grandin/BR34-6D Xbarc173-6D locus 18.30 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-6D Xbarc173-6D locus 15.30 () Automated name-based View Maps
Wheat ABD - Wheat, Chinese Spring x SQ1 - CS/SQ1-6D Xbarc173-6D locus 25.30 () Automated name-based View Maps
Wheat ABD - Wheat, Louise x Penawawa - Louise/Penawawa-6D Xbarc173-6D locus 24.30 () Automated name-based View Maps
Xgwm469-6D locus 25.20 Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_6D Xgwm469-6D locus -0.99 () Automated name-based View Maps
Wheat ABD - Wheat, Louise x Penawawa - Louise/Penawawa-6D Xgwm469-6D locus 31.60 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-6D Xgwm469-6D locus 21.10 () Automated name-based View Maps
Wheat ABD - Wheat, Chinese Spring x SQ1 - CS/SQ1-6D Xgwm469-6D locus 33.40 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-6D Xgwm469-6D locus 20.60 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-6D Xgwm469-6D locus 13.80 () Automated name-based View Maps
Wheat ABD - Wheat, Grandin x BR34 - Ta-Grandin/BR34-6D Xgwm469-6D locus 27.10 () Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-6D Xgwm469-6D locus 35.50 () Automated name-based View Maps
Xcfd80-6D locus 59.50 Wheat ABD - Wheat, Chinese Spring x SQ1 - CS/SQ1-6D Xcfd80-6D locus 93.40 () Automated name-based View Maps
Wheat ABD - Wheat, Courtot x Chinese Spring, GPW - Ta-Courtot/CS-GPW-6D Xcfd80-6D locus 25.70 () Automated name-based View Maps
Wheat ABD - Wheat, Louise x Penawawa - Louise/Penawawa-6D Xcfd80-6D locus 103.80 () Automated name-based View Maps
Xcfd76-6D locus 61.20 Wheat ABD - Wheat, Courtot x Chinese Spring, GPW - Ta-Courtot/CS-GPW-6D Xcfd76-6D locus 45.30 () Automated name-based View Maps
Wheat ABD - Wheat, Louise x Penawawa - Louise/Penawawa-6D Xcfd76-6D locus 118.50 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_6D Xcfd76-6D locus 0.38 () Automated name-based View Maps
Wheat ABD - Wheat, Chinese Spring x SQ1 - CS/SQ1-6D Xcfd76-6D locus 104.40 () Automated name-based View Maps
Wheat ABD - Wheat, P91193D1 x P92201D5 - P91193D1/P92201D5-6D Xcfd76-6D locus 62.20 () Automated name-based View Maps
Xbarc175-6D locus 79.10 Wheat ABD - Wheat, Louise x Penawawa - Louise/Penawawa-6D Xbarc175-6D locus 138.90 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-6D Xbarc175-6D locus 74.40 () Automated name-based View Maps
Wheat ABD - Wheat, Chinese Spring x SQ1 - CS/SQ1-6D Xbarc175-6D locus 122.50 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_6D Xbarc175-6D locus 0.14 () Automated name-based View Maps
Xbarc54-6D locus 46.90 Wheat ABD - Wheat, Grandin x BR34 - Ta-Grandin/BR34-6D Xbarc54-6D locus 101.20 () Automated name-based View Maps
Wheat ABD - Wheat, Conan x Reeder - Conan/Reeder-6D Xbarc54-6D locus 0.00 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 6D barc54 locus 39.30 () Automated name-based View Maps
Xbarc196-6D locus 51.40 Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_6D Xbarc196-6D locus -0.62 () Automated name-based View Maps
Wheat ABD - Wheat, Conan x Reeder - Conan/Reeder-6D Xbarc196-6D locus 13.42 () Automated name-based View Maps
Wheat ABD - Wheat, Louise x Penawawa - Louise/Penawawa-6D Xbarc196-6D locus 90.80 () Automated name-based View Maps
Wheat ABD - Wheat, Grandin x BR34 - Ta-Grandin/BR34-6D Xbarc196-6D locus 96.40 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-6D Xbarc196-6D locus 49.80 () Automated name-based View Maps
Xcfd188-6D locus 59.50 Wheat ABD - Wheat, Louise x Penawawa - Louise/Penawawa-6D Xcfd188-6D locus 107.00 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_6D Xcfd188-6D locus 0.38 () Automated name-based View Maps
Wheat ABD - Wheat, USG3209 x Jaypee - USG3209/Jaypee-6D Xcfd188-6D locus 1.10 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-6D Xcfd188-6D locus 86.30 () Automated name-based View Maps
Wheat ABD - Wheat, Conan x Reeder - Conan/Reeder-6D Xcfd188-6D locus 23.87 () Automated name-based View Maps
Xwmc773-6D locus 109.70 Wheat ABD - Wheat, Conan x Reeder - Conan/Reeder-6D Xwmc773-6D locus 98.52 () Automated name-based View Maps
Xgdm132-6D locus 19.70 Wheat ABD - Wheat, Synthetic x Opata, SSR-D - Ta-Synthetic/Opata-SSR_D-6D Xgdm132-6D locus 6.50 () Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-6D Xgdm132-6D locus 30.80 () Automated name-based View Maps
Wheat ABD - Wheat, Louise x Penawawa - Louise/Penawawa-6D Xgdm132-6D locus 28.50 () Automated name-based View Maps
Xcfd75-6D locus 19.10 Wheat ABD - Wheat, Louise x Penawawa - Louise/Penawawa-6D Xcfd75-6D locus 28.90 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 6D cfd75 locus 23.00 () Automated name-based View Maps
Wheat ABD - Wheat, Courtot x Chinese Spring, GPW - Ta-Courtot/CS-GPW-6D Xcfd75-6D locus -27.20 () Automated name-based View Maps
Xcfd42-6D locus 23.50 Wheat ABD - Wheat, Courtot x Chinese Spring, GPW - Ta-Courtot/CS-GPW-6D Xcfd42-6D locus -21.70 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 6D cfd42 locus 24.00 () Automated name-based View Maps
Xcfd19-6D locus 49.70 Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_6D Xcfd19-6D locus -0.22 () Automated name-based View Maps
Wheat ABD - Wheat, Courtot x Chinese Spring, GPW - Ta-Courtot/CS-GPW-6D Xcfd19-6D locus 16.00 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-6D Xcfd19-6D locus 71.00 () Automated name-based View Maps
Xcfd37-6D locus 59.50 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-6D Xcfd37-6D locus 86.90 () Automated name-based View Maps
Wheat ABD - Wheat, Courtot x Chinese Spring, GPW - Ta-Courtot/CS-GPW-6D Xcfd37-6D locus 26.30 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_6D Xcfd37-6D locus 0.14 () Automated name-based View Maps
Xgwm55-6D locus 57.00 Wheat ABD - Wheat, Louise x Penawawa - Louise/Penawawa-6D Xgwm55-6D locus 108.40 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_6D Xgwm55-6D locus 0.14 () Automated name-based View Maps
Wheat ABD - Wheat, P91193D1 x P92201D5 - P91193D1/P92201D5-6D Xgwm55-6D locus 33.90 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-6D Xgwm55-6D locus 73.05 () Automated name-based View Maps
Wheat ABD - Wheat, Courtot x Chinese Spring, GPW - Ta-Courtot/CS-GPW-6D Xgwm55-6D locus 27.40 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-6D Xgwm55-6D locus 60.10 () Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-6D Xgwm55-6D locus 109.80 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-6D Xgwm55-6D locus 87.40 () Automated name-based View Maps
Xcfd135-6D locus 5.20 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-6D Xcfd135-6D locus 11.60 () Automated name-based View Maps
Xcfd13-6D locus 21.30 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-6D Xcfd13-6D locus 23.90 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_6D Xcfd13-6D locus -0.99 () Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-6D Xcfd13-6D locus 41.80 () Automated name-based View Maps
Xcfd132-6D locus 34.60 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-6D Xcfd132-6D locus 38.40 () Automated name-based View Maps
Xgwm325-6D locus 52.90 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-6D Xgwm325-6D locus 80.00 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-6D Xgwm325-6D locus 47.25 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-6D Xgwm325-6D locus 61.60 () Automated name-based View Maps
Wheat ABD - Wheat, Grandin x BR34 - Ta-Grandin/BR34-6D Xgwm325-6D locus 84.00 () Automated name-based View Maps
Xcfd287-6D locus 67.90 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-6D Xcfd287-6D locus 91.60 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_6D Xcfd287-6D locus 0.38 () Automated name-based View Maps
Xbarc183-6D locus 3.20 Wheat ABD - Wheat, Louise x Penawawa - Louise/Penawawa-6D Xbarc183-6D locus 7.20 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_6D Xbarc183-6D locus -0.99 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-6D Xbarc183-6D locus 10.80 () Automated name-based View Maps
Wheat ABD - Wheat, Grandin x BR34 - Ta-Grandin/BR34-6D Xbarc183-6D locus 0.00 () Automated name-based View Maps
Xbarc96-6D locus 91.70 Wheat ABD - Wheat, Louise x Penawawa - Louise/Penawawa-6D Xbarc96-6D locus 141.70 () Automated name-based View Maps
Wheat ABD - Wheat, Nanda2419 x Wangshuibai - Ta-NxW-6D Xbarc96 locus 133.70 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_6D Xbarc96-6D locus 0.64 () Automated name-based View Maps
Wheat ABD - Wheat, Grandin x BR34 - Ta-Grandin/BR34-6D Xbarc96-6D locus 127.00 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 6D barc96 locus 62.90 () Automated name-based View Maps
Xwmc748-6D locus 69.90 Wheat ABD - Wheat, Louise x Penawawa - Louise/Penawawa-6D Xwmc748-6D locus 116.30 () Automated name-based View Maps
Xgwm133-6D locus 57.70 Wheat ABD - Wheat, USG3209 x Jaypee - USG3209/Jaypee-6D Xgwm133-6D locus 0.00 () Automated name-based View Maps

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.