*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Wheat ABD-Wheat, Courtot x Chinese Spring, GPW
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Ta-Courtot/CS-GPW-1B
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Wheat ABD - Wheat, Courtot x Chinese Spring, GPW [ View Map Set Info ]
Map Name: Ta-Courtot/CS-GPW-1B
Map Start: -12.6
Map Stop: 160.3
Features by Type:
51 locus
51 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 51.       of 3 | Next
Wheat ABD - Wheat, Courtot x Chinese Spring, GPW - Ta-Courtot/CS-GPW-1B
(Click headers to resort)
Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
Xgwm124-1B locus 94.3 Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-1B Xgwm124-1B locus 54.5 () Automated name-based View Maps
Wheat ABD - Wheat, Chinese Spring x SQ1 - CS/SQ1-1B Xgwm124-1B locus 160 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_1B Xgwm124-1B locus 0.16 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-1B Xgwm124-1B locus 111.4 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-1B Xgwm124-1B locus 64.1 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-1B Xgwm124-1B locus 93.3 () Automated name-based View Maps
Xcfd20-1B locus 59.4 Wheat ABD - Wheat, Conan x Reeder - Conan/Reeder-1B Xcfd20-1B locus 53.05 () Automated name-based View Maps
Xcfd48-1B locus 64.2 Wheat ABD - Wheat, Conan x Reeder - Conan/Reeder-1B Xcfd48-1B locus 59.36 () Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-1B Xcfd48-1B locus 67.9 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-1B Xcfd48-1B locus 39.8 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_1B Xcfd48-1B locus 0.84 () Automated name-based View Maps
Xgwm268-1B locus 92 Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-1B Xgwm268-1B locus 121.5 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-1B Xgwm268-1B locus 54.2 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-1B Xgwm268-1B locus 111.3 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_1B Xgwm268-1B locus 0.16 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-1B Xgwm268-1B locus 93.2 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides, SSR - Tturgidum-SSR-1B Xgwm268-1B locus 84.5 () Automated name-based View Maps
Wheat ABD - Wheat, Conan x Reeder - Conan/Reeder-1B Xgwm268-1B locus 72.06 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-1B Xgwm268-1B locus 63.5 () Automated name-based View Maps
Xbcd442-1B locus 73.6 Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-1B Xbcd442-1B locus 92 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-1B Xbcd442-1B locus 77.5 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-1B Xbcd442-1B locus 61.3 () Automated name-based View Maps
Wheat ABD - Wheat, Gale - Ta-Gale-1B Xbcd442-1B locus 39.4 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, DR Genes - Ta-Synthetic/Opata-DR-1B Xbcd442-1B locus 36.2 () Automated name-based View Maps
Wheat AB - T. turgidum, JK x Cham1, 2 - Tturgidum-JKxC2-1B Xbcd442-1B locus 295.9 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-1B Xbcd442-1B locus 74.7 () Automated name-based View Maps
Wheat AB - T. turgidum, JK x Cham1 - Tturgidum-JKxC-1B Xbcd442-1B locus 304.3 () Automated name-based View Maps
XksuG34-1B locus 84.4 Wheat ABD - Wheat, Synthetic x Opata, DR Genes - Ta-Synthetic/Opata-DR-1B XksuG34-1B locus 47.5 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-1B XksuG34-1B locus 88.8 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-1B XksuG34-1B locus 92.6 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-1B XksuG34-1B locus 103 () Automated name-based View Maps
XksuE11-1B locus 157.6 Wheat ABD - Wheat, Synthetic x Opata, SSR 2 - Ta-Synthetic/Opata-SSR2-1B XksuE11-1B locus 95.4 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, DR Genes - Ta-Synthetic/Opata-DR-1B XksuE11-1B locus 93.1 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-1B XksuE11-1B locus 98.9 () Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-1B XksuE11-1B locus 175.9 () Automated name-based View Maps
XE39M61b-1B locus -12.6 No other positions
Xmtd161-1B locus -2.2 No other positions
Xbcd1434-1B locus -2 No other positions
Xmta14-1B locus 0 No other positions
Xpsp3000-1B locus 1 No other positions
Xmta16-1B locus 1 No other positions
XGluB3-1B locus 1.9 No other positions
Xgpw7478-1B locus 1.9 No other positions
Xgpw1143-1B locus 11.1 No other positions
Xfbb260-1B locus 16.8 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-1B Xfbb260-1B locus 101.4 () Automated name-based View Maps
Xfbb234-1B locus 17.5 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-1B Xfbb234-1B locus 18.9 () Automated name-based View Maps
XE39M55d-1B locus 21.7 No other positions
Xcdo99-1B locus 24.6 Wheat ABD - Wheat, Gale - Ta-Gale-1B Xcdo99-1B locus -22.4 () Automated name-based View Maps
Xcfa2158-1B locus 30.2 Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_1B Xcfa2158-1B locus 0.16 () Automated name-based View Maps
Xgpw3013-1B locus 43.6 No other positions
Xcfd65-1B locus 44.8 Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-1B Xcfd65-1B locus 34.2 () Automated name-based View Maps
Wheat ABD - Wheat, Louise x Penawawa - Louise/Penawawa-1B Xcfd65-1B locus 79.1 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_1B Xcfd65-1B locus 0.16 () Automated name-based View Maps
Xgpw1239-1B locus 44.8 No other positions
Xcfd59-1B locus 46.1 Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-1B Xcfd59-1B locus 32.4 () Automated name-based View Maps

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.