*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Wheat ABD-Wheat, Courtot x Chinese Spring, GPW
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Ta-Courtot/CS-GPW-3D
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Wheat ABD - Wheat, Courtot x Chinese Spring, GPW [ View Map Set Info ]
Map Name: Ta-Courtot/CS-GPW-3D
Map Start: 0
Map Stop: 270
Features by Type:
23 locus
23 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 23 of 23.
Wheat ABD - Wheat, Courtot x Chinese Spring, GPW - Ta-Courtot/CS-GPW-3D
(Click headers to resort)
Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
Xcfd35-3D locus 0 Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_3D Xcfd35-3D locus -0.78 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-3D Xcfd35-3D locus 12.7 () Automated name-based View Maps
Wheat ABD - Wheat, Chinese Spring x SQ1 - CS/SQ1-3D Xcfd35-3D locus 0 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-3D Xcfd35-3D locus 0 () Automated name-based View Maps
Xgwm383-3D locus 177.4 Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-3D Xgwm383-3D locus 137.5 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-3D Xgwm383-3D locus 19.7 () Automated name-based View Maps
Wheat ABD - Wheat, P91193D1 x P92201D5 - P91193D1/P92201D5-3D Xgwm383-3D locus 125.3 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_3D Xgwm383-3D locus 0.14 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-3D Xgwm383-3D locus 69 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-3D Xgwm383-3D locus 116.4 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-3D Xgwm383-3D locus 101.5 () Automated name-based View Maps
Wheat ABD - Wheat, Chinese Spring x SQ1 - CS/SQ1-3D Xgwm383-3D locus 140 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, update - Ta-Synthetic/Opata-update-3D Xgwm383-3D locus 190.8 () Automated name-based View Maps
Xgwm314-3D locus 193.1 Wheat ABD - Wheat, Conan x Reeder - Conan/Reeder-3D Xgwm314-3D locus 195 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, update - Ta-Synthetic/Opata-update-3D Xgwm314-3D locus 207.5 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-3D Xgwm314-3D locus 122.4 () Automated name-based View Maps
Wheat ABD - Wheat, Sphaerococcoid Genes - Ta-Sphaerococcoid-3D Xgwm314-3D locus 118.3 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-3D Xgwm314-3D locus 115.2 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-3D Xgwm314-3D locus 18.3 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_3D Xgwm314-3D locus 0.9 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-3D Xgwm314-3D locus 73 () Automated name-based View Maps
Xfba241-3D locus 83.5 Wheat ABD - Wheat, Synthetic x Opata, update - Ta-Synthetic/Opata-update-3D Xfba241-3D locus 63.1 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-3D Xfba241-3D locus 44.6 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-3D Xfba241-3D locus 28.1 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-3D Xfba241-3D locus 56.6 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, DR Genes - Ta-Synthetic/Opata-DR-3D Xfba241-3D locus -35.4 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR-D - Ta-Synthetic/Opata-SSR_D-3D Xfba241-3D locus 58.4 () Automated name-based View Maps
Xfbb278-3D locus 20.5 Wheat ABD - Wheat, Synthetic x Opata, update - Ta-Synthetic/Opata-update-3D Xfbb278-3D locus 26.3 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-3D Xfbb278-3D locus 7.1 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-3D Xfbb278-3D locus 12.6 () Automated name-based View Maps
Xcfd55-3D locus 43.6 Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_3D Xcfd55-3D locus -0.78 () Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-3D Xcfd55-3D locus 12.2 () Automated name-based View Maps
Xcfd79-3D locus 53.6 Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_3D Xcfd79-3D locus -0.78 () Automated name-based View Maps
Xgpw1007-3D locus 75.8 No other positions
Xcfd64-3D locus 78.9 Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_3D Xcfd64-3D locus -0.78 () Automated name-based View Maps
Xcfd34-3D locus 82.4 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-3D Xcfd34-3D locus 66.1 () Automated name-based View Maps
Xglk538-3D.2 locus 82.7 No other positions
Xmtd120-3D locus 91.1 No other positions
Xglk538-3D.1 locus 94.6 No other positions
Xcfd70-3D locus 102.4 Wheat ABD - Wheat, P91193D1 x P92201D5 - P91193D1/P92201D5-3D Xcfd70-3D locus 30.9 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_3D Xcfd70-3D locus -0.78 () Automated name-based View Maps
Xpsr394-3D locus 116.2 Wheat ABD - Wheat, Gale - Ta-Gale-3D Xpsr394-3D locus 0.5 () Automated name-based View Maps
Xfba214-3D locus 130.8 No other positions
Xfba213-3D locus 132 No other positions
Xgpw4156-3D locus 159.7 No other positions
Xgpw4152-3D locus 166.7 No other positions
Xfwm4-3D locus 218.4 No other positions
Xcfd9-3D locus 227.1 Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_3D Xcfd9-3D locus 0.9 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-3D Xcfd9-3D locus 35.7 () Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-3D Xcfd9-3D locus 204.8 () Automated name-based View Maps
Wheat ABD - Wheat, Louise x Penawawa - Louise/Penawawa-3D Xcfd9-3D locus 124.3 () Automated name-based View Maps
Xfba347-3D.1 locus 254.7 No other positions
Xfba347-3D.2 locus 270 No other positions

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.