*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Wheat ABD-Wheat, Courtot x Chinese Spring, GPW
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Ta-Courtot/CS-GPW-5D
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Wheat ABD - Wheat, Courtot x Chinese Spring, GPW [ View Map Set Info ]
Map Name: Ta-Courtot/CS-GPW-5D
Map Start: 0
Map Stop: 223.6
Features by Type:
27 locus
27 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 27.       of 2 | Next
Wheat ABD - Wheat, Courtot x Chinese Spring, GPW - Ta-Courtot/CS-GPW-5D
(Click headers to resort)
Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
Xcfd18-5D locus 4.9 Wheat ABD - Wheat, Chinese Spring x SQ1 - CS/SQ1-5D Xcfd18-5D locus 19.6 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_5D Xcfd18-5D locus -0.65 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-5D Xcfd18-5D locus 3.7 () Automated name-based View Maps
Xgwm190-5D locus 16.1 Wheat ABD - Wheat, Chinese Spring x SQ1 - CS/SQ1-5D Xgwm190-5D locus 28.1 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-5D Xgwm190-5D locus 8.6 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-5D Xgwm190-5D locus 8.9 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-5D Xgwm190-5D locus 6.4 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_5D Xgwm190-5D locus -0.32 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-5D Xgwm190-5D locus -4.2 () Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-5D Xgwm190-5D locus 0 () Automated name-based View Maps
Xgwm205-5D locus 32.2 Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-5D Xgwm205-5D locus 16.4 () Automated name-based View Maps
Wheat ABD - Wheat, USG3209 x Jaypee - USG3209/Jaypee-5D Xgwm205-5D locus 56 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-5D Xgwm205-5D locus 4.5 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-5D Xgwm205-5D locus 15.1 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-5D Xgwm205-5D locus 13.7 () Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-5D Xgwm205-5D locus 14.4 () Automated name-based View Maps
Wheat ABD - Wheat, Chinese Spring x SQ1 - CS/SQ1-5D Xgwm205-5D locus 43.7 () Automated name-based View Maps
Xcfd81-5D locus 38.6 Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-5D Xcfd81-5D locus 28 () Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-5D Xcfd81-5D locus 21 () Automated name-based View Maps
Wheat ABD - Wheat, Chinese Spring x SQ1 - CS/SQ1-5D Xcfd81-5D locus 51.9 () Automated name-based View Maps
Wheat ABD - Wheat, Louise x Penawawa - Louise/Penawawa-5D Xcfd81-5D locus 0 () Automated name-based View Maps
Xcfd8-5D locus 102.5 Wheat ABD - Wheat, Conan x Reeder - Conan/Reeder-5D Xcfd8-5D locus 48.17 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-5D Xcfd8-5D locus 64.7 () Automated name-based View Maps
Wheat ABD - Wheat, Louise x Penawawa - Louise/Penawawa-5D Xcfd8-5D locus 48.6 () Automated name-based View Maps
Wheat ABD - Wheat, Chinese Spring x SQ1 - CS/SQ1-5D Xcfd8-5D locus 139.6 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-5D Xcfd8-5D locus 42.5 () Automated name-based View Maps
Xgwm583-5D locus 118.4 Wheat ABD - Wheat, Chinese Spring x SQ1 - CS/SQ1-5D Xgwm583-5D locus 149.8 () Automated name-based View Maps
Wheat ABD - Wheat, Conan x Reeder - Conan/Reeder-5D Xgwm583-5D locus 36.14 () Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-5D Xgwm583-5D locus 75.6 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-5D Xgwm583-5D locus 63 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-5D Xgwm583-5D locus 65.7 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_5D Xgwm583-5D locus 0.3 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-5D Xgwm583-5D locus 60.2 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-5D Xgwm583-5D locus 44 () Automated name-based View Maps
Xcfd57-5D locus 139.4 Wheat ABD - Wheat, Conan x Reeder - Conan/Reeder-5D Xcfd57-5D locus 72.88 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-5D Xcfd57-5D locus 56.2 () Automated name-based View Maps
Wheat ABD - Wheat, Louise x Penawawa - Louise/Penawawa-5D Xcfd57-5D locus 113.3 () Automated name-based View Maps
Wheat ABD - Wheat, Chinese Spring x SQ1 - CS/SQ1-5D Xcfd57-5D locus 163.1 () Automated name-based View Maps
Xgwm174-5D locus 133.9 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-5D Xgwm174-5D locus 76.3 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-5D Xgwm174-5D locus 69.2 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_5D Xgwm174-5D locus 0.67 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-5D Xgwm174-5D locus 73 () Automated name-based View Maps
Wheat ABD - Wheat, Louise x Penawawa - Louise/Penawawa-5D Xgwm174-5D locus 101.4 () Automated name-based View Maps
Wheat ABD - Wheat, Grandin x BR34 - Ta-Grandin/BR34-5D Xgwm174-5D locus 18.4 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-5D Xgwm174-5D locus 57.8 () Automated name-based View Maps
Wheat ABD - Wheat, Chinese Spring x SQ1 - CS/SQ1-5D Xgwm174-5D locus 168.6 () Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-5D Xgwm174-5D locus 92.9 () Automated name-based View Maps
Xcfd7-5D locus 152.3 Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-5D Xcfd7-5D locus 53.7 () Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-5D Xcfd7-5D locus 106.9 () Automated name-based View Maps
Wheat ABD - Wheat, Chinese Spring x SQ1 - CS/SQ1-5D Xcfd7-5D locus 190.3 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_5D Xcfd7-5D locus 0.67 () Automated name-based View Maps
Wheat ABD - Wheat, Louise x Penawawa - Louise/Penawawa-5D Xcfd7-5D locus 90.7 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-5D Xcfd7-5D locus 81 () Automated name-based View Maps
Xcfd3-5D locus 161 Wheat ABD - Wheat, Chinese Spring x SQ1 - CS/SQ1-5D Xcfd3-5D locus 197.4 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-5D Xcfd3-5D locus 54 () Automated name-based View Maps
Xcfd29-5D locus 179.4 Wheat ABD - Wheat, Conan x Reeder - Conan/Reeder-5D Xcfd29-5D locus 151.71 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_5D Xcfd29-5D locus 0.88 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-5D Xcfd29-5D locus 71.1 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-5D Xcfd29-5D locus 114.4 () Automated name-based View Maps
Wheat ABD - Wheat, Louise x Penawawa - Louise/Penawawa-5D Xcfd29-5D locus 165.2 () Automated name-based View Maps
Wheat ABD - Wheat, P91193D1 x P92201D5 - P91193D1/P92201D5-5D Xcfd29-5D locus 150.3 () Automated name-based View Maps
Xmta10-5D locus 0 Wheat ABD - Wheat, Synthetic x Opata, SSR 2 - Ta-Synthetic/Opata-SSR2-5D Xmta10-5D locus 4.5 () Automated name-based View Maps
Xcfa2104-5D locus 28.3 Wheat ABD - Wheat, USG3209 x Jaypee - USG3209/Jaypee-5D Xcfa2104-5D locus 55.1 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-5D Xcfa2104-5D locus 13.7 () Automated name-based View Maps
Xcfd78-5D locus 50.6 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-5D Xcfd78-5D locus 17 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_5D Xcfd78-5D locus -0.32 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-5D Xcfd78-5D locus 19.6 () Automated name-based View Maps
Xcfd67-5D locus 50.8 Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-5D Xcfd67-5D locus 25.7 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-5D Xcfd67-5D locus 19.1 () Automated name-based View Maps
Xgwm358-5D locus 51.3 Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-5D Xgwm358-5D locus 4.7 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-5D Xgwm358-5D locus 26.2 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-5D Xgwm358-5D locus 18.9 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_5D Xgwm358-5D locus -0.32 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-5D Xgwm358-5D locus 21.9 () Automated name-based View Maps
Xcfd40-5D locus 54.1 Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-5D Xcfd40-5D locus 31.1 () Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-5D Xcfd40-5D locus 31.8 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_5D Xcfd40-5D locus 0.3 () Automated name-based View Maps
Wheat ABD - Wheat, Louise x Penawawa - Louise/Penawawa-5D Xcfd40-5D locus 12.5 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-5D Xcfd40-5D locus 23.3 () Automated name-based View Maps
Xcfd52-5D locus 94.4 Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_5D Xcfd52-5D locus 0.3 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-5D Xcfd52-5D locus 62.4 () Automated name-based View Maps
Xgwm494-5D locus 115.6 No other positions
Xcfd26-5D locus 142.8 Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_5D Xcfd26-5D locus 0.75 () Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-5D Xcfd26-5D locus 96.5 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-5D Xcfd26-5D locus 50.8 () Automated name-based View Maps
Xcfd12-5D locus 163.2 Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_5D Xcfd12-5D locus 0.67 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-5D Xcfd12-5D locus 54.9 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-5D Xcfd12-5D locus 84.3 () Automated name-based View Maps
Xcfinco-5D locus 171 No other positions
Xcfd19-5D locus 186.7 Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_5D Xcfd19-5D locus 0.88 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-5D Xcfd19-5D locus 76.1 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-5D Xcfd19-5D locus 126.5 () Automated name-based View Maps
Xcfa2185-5D locus 205.5 No other positions
Xcfd2-5D locus 210.2 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-5D Xcfd2-5D locus 157.8 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-5D Xcfd2-5D locus 85.5 () Automated name-based View Maps

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.