*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Wheat ABD-Wheat, FHB QTL, Physical
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Triticum-FHB-QTL-physical-3BS
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
breakpoint
breakpointinterval
locus
qtl
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Wheat ABD - Wheat, FHB QTL, Physical [ View Map Set Info ]
Map Name: Triticum-FHB-QTL-physical-3BS
Map Start: -100
Map Stop: 0
Features by Type:
7 breakpoint
8 breakpointinterval
11 locus
1 qtl
27 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 27.       of 2 | Next
Wheat ABD - Wheat, FHB QTL, Physical - Triticum-FHB-QTL-physical-3BS
(Click headers to resort)
Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
Xbarc75-3B locus -95 Wheat ABD - Wheat, Chinese Spring x SQ1 - CS/SQ1-3B Xbarc75-3B locus 10.6 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-3B Xbarc75-3B locus 0 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_3B Xbarc75-3B locus -0.89 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-3B Xbarc75-3B locus 9 () Automated name-based View Maps
Wheat ABD - Wheat, SxS, FHB QTL, 2003 - Triticum-SxS-FHB-QTL/2003-3BS Xbarc75-3B locus 10 () Automated name-based View Maps
Xbarc133-3B locus -83 Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-3B Xbarc133-3B locus 15.6 () Automated name-based View Maps
Wheat ABD - Wheat, SxS, FHB QTL, 2003 - Triticum-SxS-FHB-QTL/2003-3BS Xbarc133-3B locus 26 () Automated name-based View Maps
Wheat ABD - Wheat, Chinese Spring x SQ1 - CS/SQ1-3B Xbarc133-3B locus 10.6 () Automated name-based View Maps
Xgwm493-3B locus -83 Wheat AB - Durum wheat, Kofa x UC1113 - Kofa/UC1113-3B Xgwm493-3B locus 13 () Automated name-based View Maps
Wheat ABD - Wheat, NxB, FHB QTL - Triticum-NxB-FHB-QTL/2003-3BS Xgwm493-3B locus 18 () Automated name-based View Maps
Wheat ABD - Wheat, Sphaerococcoid Genes - Ta-Sphaerococcoid-3B Xgwm493-3B locus 75 () Automated name-based View Maps
Wheat ABD - Wheat, WxM, FHB QTL - Triticum-WxM-FHB-QTL-3B Xgwm493-3B locus 12.5 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-3B Xgwm493-3B locus 11.8 () Automated name-based View Maps
Wheat ABD - Wheat, SxS, FHB QTL, 2003 - Triticum-SxS-FHB-QTL/2003-3BS Xgwm493-3B locus 34 () Automated name-based View Maps
Wheat ABD - Wheat, P91193D1 x P92201D5 - P91193D1/P92201D5-3B Xgwm493-3B locus 13.3 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-3B Xgwm493-3B locus 19.4 () Automated name-based View Maps
Wheat ABD - Wheat, Chinese Spring x SQ1 - CS/SQ1-3B Xgwm493-3B locus 19.9 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_3B Xgwm493-3B locus -0.89 () Automated name-based View Maps
Wheat ABD - Wheat, Louise x Penawawa - Louise/Penawawa-3B Xgwm493-3B locus 0 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-3B Xgwm493-3B locus 21.6 () Automated name-based View Maps
Wheat ABD - Wheat, USG3209 x Jaypee - USG3209/Jaypee-3B Xgwm493-3B locus 0 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-3B Xgwm493-3B locus 19.7 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, update - Ta-Synthetic/Opata-update-3B Xgwm493-3B locus 35.5 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides, SSR - Tturgidum-SSR-3B Xgwm493-3B locus -43.2 () Automated name-based View Maps
Xbarc68-3B locus -66 Wheat ABD - Wheat, Louise x Penawawa - Louise/Penawawa-3B Xbarc68-3B locus 58.1 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-3B Xbarc68-3B locus 56.9 () Automated name-based View Maps
Wheat ABD - Wheat, Chinese Spring x SQ1 - CS/SQ1-3B Xbarc68-3B locus 77.6 () Automated name-based View Maps
Wheat ABD - Wheat, NxB, FHB QTL - Triticum-NxB-FHB-QTL/2003-3BS Xbarc68-3B locus 67 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_3B Xbarc68-3B locus -0.68 () Automated name-based View Maps
Xgwm389-3B locus -95 Wheat ABD - Wheat, WxM, FHB QTL - Triticum-WxM-FHB-QTL-3B Xgwm389-3B locus 0 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-3B Xgwm389-3B locus 0.7 () Automated name-based View Maps
Wheat AB - T. turgidum, JK x Cham1, 2 - Tturgidum-JKxC2-3B Xgwm389-3B locus 0 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-3B Xgwm389-3B locus 3.5 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-3B Xgwm389-3B locus 5 () Automated name-based View Maps
Wheat ABD - Wheat, NxB, FHB QTL - Triticum-NxB-FHB-QTL/2003-3BS Xgwm389-3B locus 0 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, update - Ta-Synthetic/Opata-update-3B Xgwm389-3B locus 4.7 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-3B Xgwm389-3B locus 1.7 () Automated name-based View Maps
Wheat AB - T. turgidum, JK x Cham1 - Tturgidum-JKxC-3B Xgwm389-3B locus 0 () Automated name-based View Maps
Wheat ABD - Wheat, SxS, FHB QTL, 2003 - Triticum-SxS-FHB-QTL/2003-3BS Xgwm389-3B locus 8 () Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-3B Xgwm389-3B locus 0 () Automated name-based View Maps
Wheat ABD - Wheat, Sphaerococcoid Genes - Ta-Sphaerococcoid-3B Xgwm389-3B locus 0 () Automated name-based View Maps
Wheat ABD - Wheat, NxC, FHB QTL - Triticum-NxC-FHB-QTL-3BS Xgwm389-3B locus 45.5 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides, SSR - Tturgidum-SSR-3B Xgwm389-3B locus -81.1 () Automated name-based View Maps
Wheat ABD - Wheat, Conan x Reeder - Conan/Reeder-3B Xgwm389-3B locus 0 () Automated name-based View Maps
Wheat AB - Durum wheat, Kofa x UC1113 - Kofa/UC1113-3B Xgwm389-3B locus 0 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_3B Xgwm389-3B locus -0.68 () Automated name-based View Maps
Xgwm533-3B.1 locus -83 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-3B Xgwm533-3B.1 locus 8.9 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-3B Xgwm533-3B.1 locus 11.1 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-3B Xgwm533-3B.1 locus 7 () Automated name-based View Maps
Wheat ABD - Wheat, SxS, FHB QTL, 2003 - Triticum-SxS-FHB-QTL/2003-3BS Xgwm533-3B.1 locus 21 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-3B Xgwm533-3B.1 locus 5.9 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, update - Ta-Synthetic/Opata-update-3B Xgwm533-3B.1 locus 9.8 () Automated name-based View Maps
Xbarc73-3B locus -45 Wheat ABD - Wheat, SxS, FHB QTL, 2003 - Triticum-SxS-FHB-QTL/2003-3BS Xbarc73-3B locus 97 () Automated name-based View Maps
Wheat AB - Durum wheat, Kofa x UC1113 - Kofa/UC1113-3B Xbarc73-3B locus 107.5 () Automated name-based View Maps
Wheat ABD - Wheat, NxB, FHB QTL - Triticum-NxB-FHB-QTL/2003-3BS Xbarc73-3B locus 73 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-3B Xbarc73-3B locus 59.8 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_3B Xbarc73-3B locus -0.45 () Automated name-based View Maps
Xbarc102-3B locus -83 Wheat ABD - Wheat, SxS, FHB QTL, 2003 - Triticum-SxS-FHB-QTL/2003-3BS Xbarc102-3B locus 48 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-3B Xbarc102-3B locus 38.5 () Automated name-based View Maps
Wheat ABD - Wheat, P91193D1 x P92201D5 - P91193D1/P92201D5-3B Xbarc102-3B locus 0 () Automated name-based View Maps
Wheat ABD - Wheat, NxB, FHB QTL - Triticum-NxB-FHB-QTL/2003-3BS Xbarc102-3B locus 22 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_3B Xbarc102-3B locus -0.89 () Automated name-based View Maps
XSTS3B1-3B.1 locus -95 Wheat ABD - Wheat, NxB, FHB QTL - Triticum-NxB-FHB-QTL/2003-3BS XSTS3B1-3B.1 locus 4 () Automated name-based View Maps
Wheat ABD - Wheat, SxS, FHB QTL, 2003 - Triticum-SxS-FHB-QTL/2003-3BS XSTS3B1-3B.1 locus 10 () Automated name-based View Maps
Xsun2-3B locus -83 Wheat ABD - 3B Physical - Physical-3B sun2 locus 3.67 () Automated name-based View Maps
Wheat ABD - Wheat, SxS, FHB QTL, 2003 - Triticum-SxS-FHB-QTL/2003-3BS Xsun2-3B locus 13 () Automated name-based View Maps
XBARC87-3B locus -83 Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-3B XBARC87-3B locus 14.2 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_3B XBARC87-3B locus -0.89 () Automated name-based View Maps
Wheat ABD - Wheat, SxS, FHB QTL, 2003 - Triticum-SxS-FHB-QTL/2003-3BS XBARC87-3B locus 40 () Automated name-based View Maps
QFhs.ndsu-3BS qtl -87 - -78 Wheat ABD - Wheat, NxB, FHB QTL - Triticum-NxB-FHB-QTL/2003-3BS QFhs.ndsu-3BS qtl 0 - 32 () Automated name-based View Maps
Wheat ABD - Wheat, SxS, FHB QTL, 2003 - Triticum-SxS-FHB-QTL/2003-3BS QFhs.ndsu-3BS qtl 0 - 50 () Automated name-based View Maps
Wheat ABD - Wheat, Composite, 2004 - Wheat-Composite2004-3B QFhs.ndsu-3BS qtl 16 - 20 () Automated name-based View Maps
Wheat ABD - Wheat, NxC, FHB QTL - Triticum-NxC-FHB-QTL-3BS QFhs.ndsu-3BS qtl 37 - 43.5 () Automated name-based View Maps
3BS-3/Telomere breakpointinterval -100 - -87 No other positions
3BS-8/3BS3 breakpointinterval -87 - -78 No other positions
3BS-9/3BS-7 breakpointinterval -75 - -57 No other positions
3BS-1/3BS-2 breakpointinterval -56 - -33 No other positions
3BS-7/3BS-8 breakpointinterval -78 - -75 No other positions
3BS-2/3BS-9 breakpointinterval -57 - -56 No other positions
3BS-5/3BS-1 breakpointinterval -33 - -20 No other positions
Centromere/3BS-5 breakpointinterval -20 - 0 No other positions
3BS-1 breakpoint -33 Wheat ABD - Wheat, Physical, R Genes - Ta-Physical-RGenes-3B 3BS-1 breakpoint -33 () Automated name-based View Maps
3BS-3 breakpoint -87 Wheat ABD - Wheat, Physical, R Genes - Ta-Physical-RGenes-3B 3BS-3 breakpoint -87 () Automated name-based View Maps
3BS-5 breakpoint -20 Wheat ABD - Wheat, Physical, R Genes - Ta-Physical-RGenes-3B 3BS-5 breakpoint -20 () Automated name-based View Maps
3BS-8 breakpoint -78 Wheat ABD - Wheat, Physical, R Genes - Ta-Physical-RGenes-3B 3BS-8 breakpoint -78 () Automated name-based View Maps
3BS-9 breakpoint -57 Wheat ABD - Wheat, Physical, R Genes - Ta-Physical-RGenes-3B 3BS-9 breakpoint -57 () Automated name-based View Maps

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.