*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Wheat ABD-Wheat, Gale
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Ta-Gale-3D
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
baccontig
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
(Hide Advanced Menu)

Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Wheat ABD - Wheat, Gale [ View Map Set Info ]
Map Name: Ta-Gale-3D
Map Start: -51.60
Map Stop: 100.80
Features by Type:
20 baccontig
49 locus
69 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 69.       of 3 | Next
Wheat ABD - Wheat, Gale - Ta-Gale-3D
(Click headers to resort)		 Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
R1 locus 58.90 Wheat ABD - Wheat, Gale - Ta-Gale-3A R1 locus 58.90 () Automated name-based View Maps
Wheat ABD - Wheat, Gale - Ta-Gale-3B R1 locus 58.90 () Automated name-based View Maps
Wheat ABD - Wheat genes - Triticum-Genes-3D R1 locus 56.40 () Automated name-based View Maps
R3 locus 58.90 Wheat ABD - Wheat, Gale - Ta-Gale-3A R3 locus 58.90 () Automated name-based View Maps
Wheat ABD - Wheat, Gale - Ta-Gale-3B R3 locus 58.90 () Automated name-based View Maps
Centromere locus 0.00 Barley - Barley genes - Hordeum-Genes-4H Centromere locus 0.00 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-5D Centromere locus 12.20 () Automated name-based View Maps
Barley - 5HS, Steptoe x Morex - 5HS, Steptoe x Morex Centromere locus 0.00 () Automated name-based View Maps
Wheat ABD - Wheat genes - Triticum-Genes-6B Centromere locus 0.00 () Automated name-based View Maps
Wheat ABD - Wheat, Gale - Ta-Gale-2A Centromere locus 0.00 () Automated name-based View Maps
Wheat ABD - Wheat, Gale - Ta-Gale-1D Centromere locus 0.00 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-4A Centromere locus 23.70 () Automated name-based View Maps
Wheat A - 5AS, T.m. G3116 x DV92 - 5AS, T.m. G3116 x DV92 Centromere locus 0.00 () Automated name-based View Maps
Rye - Rye, Ds2 x RxL10 - Secale-Devos-7R Centromere locus 0.00 () Automated name-based View Maps
Wheat ABD - Wheat genes - Triticum-Genes-4A Centromere locus 0.00 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-3A Centromere locus 58.00 () Automated name-based View Maps
Barley - Barley, BxGP - Hordeum-Laurie1-2H Centromere locus 58.60 () Automated name-based View Maps
Wheat ABD - Wheat, Gale - Ta-Gale-5A Centromere locus 0.00 () Automated name-based View Maps
Wheat A - T. monococcum, DV92 x G3116 - Tm-Dubcovsky2-4A Centromere locus 0.00 () Automated name-based View Maps
Wheat A - T. monococcum, DV92 x G3116 - Tm-Dubcovsky2-3A Centromere locus 0.00 () Automated name-based View Maps
Wheat ABD - Wheat, Gale - Ta-Gale-4D Centromere locus 0.00 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-7B Centromere locus 38.50 () Automated name-based View Maps
Wheat ABD - Wheat genes - Triticum-Genes-5A Centromere locus 0.00 () Automated name-based View Maps
Wheat A - T. monococcum, DV92 x G3116 - Tm-Dubcovsky2-5A Centromere locus 0.00 () Automated name-based View Maps
Wheat ABD - Wheat genes - Triticum-Genes-2A Centromere locus 0.00 () Automated name-based View Maps
Wheat ABD - Triticeae consensus - Triticeae-Sorrells-1 Centromere locus 50.20 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-7D Centromere locus 79.00 () Automated name-based View Maps
Wheat ABD - Wheat genes - Triticum-Genes-5B Centromere locus 0.00 () Automated name-based View Maps
Wheat ABD - Wheat genes - Triticum-Genes-2D Centromere locus 0.00 () Automated name-based View Maps
Wheat ABD - Wheat, Gale - Ta-Gale-5D Centromere locus 0.00 () Automated name-based View Maps
Wheat A - T. monococcum, DV92 x G3116 - Tm-Dubcovsky2-1A Centromere locus 0.00 () Automated name-based View Maps
Barley - Barley, IxT - Hordeum-Laurie5-2H Centromere locus 59.00 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-5B Centromere locus 28.20 () Automated name-based View Maps
Wheat A - 1AS, T.m. G1777 x G2528 - 1AS, T.m. G1777 x G2528 Centromere locus 0.00 () Automated name-based View Maps
Wheat A - T. monococcum, DV92 x G3116 - Tm-Dubcovsky2-2A Centromere locus 0.00 () Automated name-based View Maps
Rye - Rye, Ds2 x RxL10 - Secale-Devos-6R Centromere locus 0.00 () Automated name-based View Maps
Wheat ABD - Wheat, Gale - Ta-Gale-6A Centromere locus 0.00 () Automated name-based View Maps
Wheat ABD - Wheat, Gale - Ta-Gale-2B Centromere locus 0.00 () Automated name-based View Maps
Wheat ABD - Wheat genes - Triticum-Genes-6A Centromere locus 0.00 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-3B Centromere locus 87.00 () Automated name-based View Maps
Wheat ABD - Wheat genes - Triticum-Genes-4B Centromere locus 0.00 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-3D Centromere locus 77.50 () Automated name-based View Maps
Wheat ABD - Wheat genes - Triticum-Genes-7B Centromere locus 0.00 () Automated name-based View Maps
Wheat ABD - Wheat genes - Triticum-Genes-7A Centromere locus 0.00 () Automated name-based View Maps
Wheat ABD - Triticeae consensus - Triticeae-Hart-6 Centromere locus 0.00 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-2B Centromere locus 73.50 () Automated name-based View Maps
Wheat ABD - Wheat, Gale - Ta-Gale-6D Centromere locus 0.00 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-1D Centromere locus 51.30 () Automated name-based View Maps
Wheat ABD - 5DS, CS x RL5406 - 5DS, CS x RL5406 Centromere locus 0.00 () Automated name-based View Maps
Wheat ABD - Wheat, Gale - Ta-Gale-7A Centromere locus 0.00 () Automated name-based View Maps
Wheat ABD - 1BS, CS x CNN - 1BS, CS x CNN Centromere locus 0.00 () Automated name-based View Maps
Wheat ABD - Wheat genes - Triticum-Genes-5D Centromere locus 0.00 () Automated name-based View Maps
Barley - Barley, physical - Hordeum-Physical-RFLP-3H Centromere locus 69.40 () Automated name-based View Maps
Wheat A - T. monococcum, G1777 x G2528 - Tm-Dubcovsky-1A Centromere locus 0.00 () Automated name-based View Maps
Wheat ABD - Wheat, Gale - Ta-Gale-6B Centromere locus 0.00 () Automated name-based View Maps
Wheat ABD - Wheat genes - Triticum-Genes-1B Centromere locus 0.00 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-1B Centromere locus 36.40 () Automated name-based View Maps
Wheat ABD - Wheat, Gale - Ta-Gale-3A Centromere locus 0.00 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-6B Centromere locus 0.00 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-2A Centromere locus 126.70 () Automated name-based View Maps
Wheat ABD - Wheat genes - Triticum-Genes-1A Centromere locus 0.00 () Automated name-based View Maps
Wheat D - T.tauschii, Appels - Tt-Appels-1D Centromere locus 11.35 () Automated name-based View Maps
Wheat ABD - Wheat genes - Triticum-Genes-3A Centromere locus 0.00 () Automated name-based View Maps
Wheat A - 5AS, T.m. G1777 x G2528 - 5AS, T.m. G1777 x G2528 Centromere locus 0.00 () Automated name-based View Maps
Wheat ABD - Wheat, Gale - Ta-Gale-2D Centromere locus 0.00 () Automated name-based View Maps
Rye - Rye, Ds2 x RxL10 - Secale-Devos-4R Centromere locus 0.00 () Automated name-based View Maps
Wheat ABD - Wheat, Gale - Ta-Gale-4A Centromere locus 0.00 () Automated name-based View Maps
Wheat ABD - Wheat, Gale - Ta-Gale-7D Centromere locus 0.00 () Automated name-based View Maps
Wheat ABD - Triticeae consensus - Triticeae-Sorrells-3 Centromere locus 60.10 () Automated name-based View Maps
Wheat ABD - Wheat, Gale - Ta-Gale-1B Centromere locus 0.00 () Automated name-based View Maps
Wheat ABD - Wheat genes - Triticum-Genes-4D Centromere locus 0.00 () Automated name-based View Maps
Barley - Barley, physical - Hordeum-Physical-RFLP-5H Centromere locus 38.90 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-5A Centromere locus 9.80 () Automated name-based View Maps
Wheat ABD - Wheat, Gale - Ta-Gale-7B Centromere locus 0.00 () Automated name-based View Maps
Wheat ABD - Wheat genes - Triticum-Genes-7D Centromere locus 0.00 () Automated name-based View Maps
Rye - Rye, Ds2 x RxL10 - Secale-Devos-3R Centromere locus 0.00 () Automated name-based View Maps
Wheat ABD - Wheat genes - Triticum-Genes-1D Centromere locus 0.00 () Automated name-based View Maps
Wheat ABD - Wheat, Gale - Ta-Gale-3B Centromere locus 0.00 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-4B Centromere locus 19.00 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-2D Centromere locus 128.50 () Automated name-based View Maps
Wheat ABD - Wheat genes - Triticum-Genes-2B Centromere locus 0.00 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-6D Centromere locus 0.00 () Automated name-based View Maps
Wheat ABD - Wheat, Gale - Ta-Gale-5B Centromere locus 0.00 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-4D Centromere locus 52.20 () Automated name-based View Maps
Wheat ABD - Wheat genes - Triticum-Genes-3D Centromere locus 0.00 () Automated name-based View Maps
Rye - Rye, Ds2 x RxL10 - Secale-Devos-5R Centromere locus 0.00 () Automated name-based View Maps
Wheat ABD - Wheat, Gale - Ta-Gale-4B Centromere locus 0.00 () Automated name-based View Maps
Rye - Rye, Ds2 x RxL10 - Secale-Devos-1R Centromere locus 0.00 () Automated name-based View Maps
Barley - Barley, CxHs - Hordeum-Laurie2-2H Centromere locus 74.10 () Automated name-based View Maps
Wheat ABD - Wheat genes - Triticum-Genes-6D Centromere locus 0.00 () Automated name-based View Maps
Barley - Barley, physical - Hordeum-Physical-RFLP-1H Centromere locus 62.00 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-6A Centromere locus 0.00 () Automated name-based View Maps
Wheat AB - 1BS, durum x dicoccoides - 1BS, durum x dicoccoides Centromere locus 0.00 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-1A Centromere locus 56.50 () Automated name-based View Maps
Wheat ABD - Triticeae consensus - Triticeae-Sorrells-2 Centromere locus 129.00 () Automated name-based View Maps
Wheat A - T. monococcum, DV92 x G3116 - Tm-Dubcovsky2-6A Centromere locus 0.00 () Automated name-based View Maps
Wheat A - T. monococcum, DV92 x G3116 - Tm-Dubcovsky2-7A Centromere locus 0.00 () Automated name-based View Maps
Wheat ABD - Wheat, Gale - Ta-Gale-1A Centromere locus 0.00 () Automated name-based View Maps
Rye - Rye, Ds2 x RxL10 - Secale-Devos-2R Centromere locus 0.00 () Automated name-based View Maps
Wheat ABD - Wheat, CS x CS-CNN DS1A - Ta-Dubcovsky-1A Centromere locus 0.00 () Automated name-based View Maps
Wheat ABD - Triticum, CS-G1777 DS1A^m^(1A) RSL - TmTa-Dubcovsky-1A Centromere locus 0.00 () Automated name-based View Maps
Wheat ABD - Wheat genes - Triticum-Genes-3B Centromere locus 0.00 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-7A Centromere locus 121.90 () Automated name-based View Maps
Xwg110-3D locus 35.90 Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-3D Xwg110-3D locus 66.30 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, update - Ta-Synthetic/Opata-update-3D Xwg110-3D locus 179.00 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-3D Xwg110-3D locus 118.40 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, DR Genes - Ta-Synthetic/Opata-DR-3D Xwg110-3D locus 41.10 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-3D Xwg110-3D locus 107.40 () Automated name-based View Maps
Xpsr116-3D locus 2.20 No other positions
Xpsr156-3D locus 4.90 No other positions
Xpsr170-3D locus 20.30 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-3D Xpsr170-3D locus 98.00 () Automated name-based View Maps
Xpsr394-3D locus 0.50 Wheat ABD - Wheat, Courtot x Chinese Spring, GPW - Ta-Courtot/CS-GPW-3D Xpsr394-3D locus 116.20 () Automated name-based View Maps
Xpsp3019-3D locus 1.00 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-3D Xpsp3019-3D locus 90.90 () Automated name-based View Maps
Xpsr904-3D locus 62.40 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-3D Xpsr904-3D locus 126.00 () Automated name-based View Maps
Xpsr903-3D locus -5.60 No other positions
Xpsr305-3D locus -49.60 No other positions
Xpsr598-3D locus -11.40 No other positions
Xpsr902-3D locus -3.90 No other positions
Xpsr909-3D locus -0.90 No other positions
Xpsr1196-3D locus -42.10 Wheat ABD - Wheat, Forno x Oberkulmer - Triticum-FxO-3DS Xpsr1196-3D locus 0.00 () Automated name-based View Maps
Xpsr56-3D locus 1.00 No other positions
Xpsr74-3D locus 13.40 No other positions
Xpsr354-3D locus 3.00 No other positions
Xpsr543-3D locus 6.50 No other positions
Xpsr570-3D locus 5.90 No other positions
Xpsr578-3D locus 8.10 No other positions
Xpsr754-3D locus 16.40 No other positions
Xpsr931-3D locus 74.90 Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-3D Xpsr931-3D locus 208.60 () Automated name-based View Maps
Wheat ABD - Wheat, Forno x Oberkulmer - Triticum-FxO-3DL Xpsr931-3D locus 0.00 () Automated name-based View Maps
Xpsr1067-3D locus 39.50 No other positions

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.