*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Wheat ABD-Wheat, Grandin x BR34
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Ta-Grandin/BR34-5B
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Wheat ABD - Wheat, Grandin x BR34 [ View Map Set Info ]
Map Name: Ta-Grandin/BR34-5B
Map Start: 0
Map Stop: 213
Features by Type:
31 locus
31 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 31.       of 2 | Next
Wheat ABD - Wheat, Grandin x BR34 - Ta-Grandin/BR34-5B
(Click headers to resort)
Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
Xbarc74-5B locus 65.3 Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_5B Xbarc74-5B locus 0.42 () Automated name-based View Maps
Wheat ABD - Wheat, Chinese Spring x SQ1 - CS/SQ1-5B Xbarc74-5B locus 56.7 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-5B Xbarc74-5B locus 33.1 () Automated name-based View Maps
Wheat ABD - Wheat, Louise x Penawawa - Louise/Penawawa-5B Xbarc74-5B locus 40 () Automated name-based View Maps
Wheat ABD - Wheat, Conan x Reeder - Conan/Reeder-5B Xbarc74-5B locus 71.19 () Automated name-based View Maps
Wheat AB - Durum wheat, Kofa x UC1113 - Kofa/UC1113-5B Xbarc74-5B locus 41.2 () Automated name-based View Maps
Centromere-5B locus 42.6 Wheat ABD - Wheat, Physical, R Genes - Ta-Physical-RGenes-5B Centromere-5B locus 0 () Automated name-based View Maps
Wheat AB - T. turgidum, Omrabi5 x dicoccoides, QTL - Tt-Oxd-QTL-5B Centromere-5B locus 90.6 () Automated name-based View Maps
Wheat AB - Durum wheat, Svevo x Ciccio - Svevo/Ciccio-5B Centromere-5B locus 47.9 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR 2 - Ta-Synthetic/Opata-SSR2-5B Centromere-5B locus 24.7 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides - Tturgidum-MxM-5B Centromere-5B locus 0 () Automated name-based View Maps
Wheat AB - T. turgidum, JK x Cham1 - Tturgidum-JKxC-5B Centromere-5B locus 18.4 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-5B Centromere-5B locus 35.2 - 39 () Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-5B Centromere-5B locus 34 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, gbx RFLP - Ta-Synthetic/Opata-gbx-5B Centromere-5B locus 34 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, DR Genes - Ta-Synthetic/Opata-DR-5B Centromere-5B locus 0 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides, AFLP - Tturgidum-MxM-AFLP-5B Centromere-5B locus 0 () Automated name-based View Maps
Wheat ABD - Wheat, Forno x Oberkulmer - Triticum-FxO-5B Centromere-5B locus 8 () Automated name-based View Maps
Xgdm3-5B locus 0 No other positions
Xfcp209-5B locus 24.5 No other positions
Xbarc28-5B locus 39.8 No other positions
Xbarc216-5B locus 44.6 Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-5B Xbarc216-5B locus 19 () Automated name-based View Maps
Wheat ABD - Wheat, P91193D1 x P92201D5 - P91193D1/P92201D5-5B Xbarc216-5B locus 42 () Automated name-based View Maps
Xbarc136-5B locus 48.4 No other positions
Xbarc1153-5B locus 51.5 No other positions
Xbarc4-5B locus 55.7 Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_5B Xbarc4-5B locus 0.65 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-5B Xbarc4-5B locus 27.9 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-5B Xbarc4-5B locus 58.2 () Automated name-based View Maps
Wheat ABD - Wheat, Louise x Penawawa - Louise/Penawawa-5B Xbarc4-5B locus 0 () Automated name-based View Maps
Xfcp157-5B locus 55.7 No other positions
Xfcp75-5B locus 59.3 No other positions
Xbarc128-5B locus 71.7 No other positions
Xbarc116-5B locus 86.4 No other positions
Xfcp320-5B locus 96.3 No other positions
Xbarc1116.1-5B locus 113.8 No other positions
Xbarc1116.2-5B locus 123.6 No other positions
Xfcp261-5B locus 129.1 No other positions
Tsn1-5B locus 137.1 No other positions
Xfcp380-5B locus 144.4 No other positions
Xbarc55-5B locus 148 No other positions
Xfcp101-5B locus 149.8 No other positions
Xbarc97-5B locus 160.9 Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 7D barc97 locus 93.8 () Automated name-based View Maps
Wheat ABD - Wheat_Consensus_2014_Ug99_Rust - Wheat_Consensus_2014_Ug99_Rust_7 barc97 locus 72.01 () Automated name-based View Maps
Xgdm8-5B locus 168.9 No other positions
Xbarc190-5B locus 174.2 No other positions
Xbarc234-5B locus 193 No other positions

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.