*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Wheat ABD-Wheat, Louise x Penawawa
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Louise/Penawawa-1B
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
locus
qtl
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Wheat ABD - Wheat, Louise x Penawawa [ View Map Set Info ]
Map Name: Louise/Penawawa-1B
Map Start: 0
Map Stop: 79.1
Features by Type:
8 locus
1 qtl
9 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 9 of 9.
Wheat ABD - Wheat, Louise x Penawawa - Louise/Penawawa-1B
(Click headers to resort)
Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
Xgwm11-1B locus 51.7 Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-1B Xgwm11-1B locus 34.3 () Automated name-based View Maps
Wheat ABD - Wheat, Chinese Spring x SQ1 - CS/SQ1-1B Xgwm11-1B locus 79.4 () Automated name-based View Maps
Wheat AB - T. turgidum, Omrabi5 x dicoccoides, QTL - Tt-Oxd-QTL-1B Xgwm11-1B locus 11.5 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-1B Xgwm11-1B locus 33.5 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_1B Xgwm11-1B locus -0.95 () Automated name-based View Maps
Wheat AB - T. turgidum, JK x Cham1 - Tturgidum-JKxC-1B Xgwm11-1B locus 168.9 () Automated name-based View Maps
Wheat AB - T. turgidum, JK x Cham1, 2 - Tturgidum-JKxC2-1B Xgwm11-1B locus 150.7 () Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-1B Xgwm11-1B locus 46.7 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-1B Xgwm11-1B locus 37.5 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-1B Xgwm11-1B locus 33.8 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides, SSR - Tturgidum-SSR-1B Xgwm11-1B locus 1 () Automated name-based View Maps
Xcfd65-1B locus 79.1 Wheat ABD - Wheat, Courtot x Chinese Spring, GPW - Ta-Courtot/CS-GPW-1B Xcfd65-1B locus 44.8 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_1B Xcfd65-1B locus 0.16 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-1B Xcfd65-1B locus 34.2 () Automated name-based View Maps
Xbarc240-1B locus 47 Wheat AB - Durum wheat, Kofa x UC1113 - Kofa/UC1113-1B Xbarc240-1B locus 46.4 () Automated name-based View Maps
Wheat ABD - Wheat, Grandin x BR34 - Ta-Grandin/BR34-1B Xbarc240-1B locus 25.6 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-1B Xbarc240-1B locus 38 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-1B Xbarc240-1B locus 35.5 () Automated name-based View Maps
Xbarc81-1B locus 0 Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-1B Xbarc81-1B locus 61.7 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_1B Xbarc81-1B locus 0.77 () Automated name-based View Maps
Wheat ABD - Wheat, Grandin x BR34 - Ta-Grandin/BR34-1B Xbarc81-1B locus 60.7 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-1B Xbarc81-1B locus 69 () Automated name-based View Maps
Xwmc626-1B locus 50.5 Wheat AB - Durum wheat, Kofa x UC1113 - Kofa/UC1113-1B Xwmc626-1B locus 35.1 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-1B Xwmc626-1B locus 34.8 () Automated name-based View Maps
Xgwm247.1-1B locus 1.6 No other positions
Xcfd048.2-1B locus 19.3 No other positions
Xbarc120-1B locus 51.1 No other positions
QTwt.wak-1B qtl 1.6 - 19.3 No other positions

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.