*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Wheat ABD-Wheat, Louise x Penawawa
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Louise/Penawawa-3B
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
locus
qtl
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Wheat ABD - Wheat, Louise x Penawawa [ View Map Set Info ]
Map Name: Louise/Penawawa-3B
Map Start: 0
Map Stop: 103.1
Features by Type:
9 locus
3 qtl
12 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 12 of 12.
Wheat ABD - Wheat, Louise x Penawawa - Louise/Penawawa-3B
(Click headers to resort)
Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
Xgwm493-3B locus 0 Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_3B Xgwm493-3B locus -0.89 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides, SSR - Tturgidum-SSR-3B Xgwm493-3B locus -43.2 () Automated name-based View Maps
Wheat ABD - Wheat, USG3209 x Jaypee - USG3209/Jaypee-3B Xgwm493-3B locus 0 () Automated name-based View Maps
Wheat ABD - Wheat, NxB, FHB QTL - Triticum-NxB-FHB-QTL/2003-3BS Xgwm493-3B locus 18 () Automated name-based View Maps
Wheat ABD - Wheat, WxM, FHB QTL - Triticum-WxM-FHB-QTL-3B Xgwm493-3B locus 12.5 () Automated name-based View Maps
Wheat ABD - Wheat, Sphaerococcoid Genes - Ta-Sphaerococcoid-3B Xgwm493-3B locus 75 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-3B Xgwm493-3B locus 19.7 () Automated name-based View Maps
Wheat AB - Durum wheat, Kofa x UC1113 - Kofa/UC1113-3B Xgwm493-3B locus 13 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-3B Xgwm493-3B locus 11.8 () Automated name-based View Maps
Wheat ABD - Wheat, P91193D1 x P92201D5 - P91193D1/P92201D5-3B Xgwm493-3B locus 13.3 () Automated name-based View Maps
Wheat ABD - Wheat, FHB QTL, Physical - Triticum-FHB-QTL-physical-3BS Xgwm493-3B locus -83 () Automated name-based View Maps
Wheat ABD - Wheat, Chinese Spring x SQ1 - CS/SQ1-3B Xgwm493-3B locus 19.9 () Automated name-based View Maps
Wheat ABD - Wheat, SxS, FHB QTL, 2003 - Triticum-SxS-FHB-QTL/2003-3BS Xgwm493-3B locus 34 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-3B Xgwm493-3B locus 19.4 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, update - Ta-Synthetic/Opata-update-3B Xgwm493-3B locus 35.5 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-3B Xgwm493-3B locus 21.6 () Automated name-based View Maps
Xbarc68-3B locus 58.1 Wheat ABD - Wheat, FHB QTL, Physical - Triticum-FHB-QTL-physical-3BS Xbarc68-3B locus -66 () Automated name-based View Maps
Wheat ABD - Wheat, NxB, FHB QTL - Triticum-NxB-FHB-QTL/2003-3BS Xbarc68-3B locus 67 () Automated name-based View Maps
Wheat ABD - Wheat, Chinese Spring x SQ1 - CS/SQ1-3B Xbarc68-3B locus 77.6 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-3B Xbarc68-3B locus 56.9 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_3B Xbarc68-3B locus -0.68 () Automated name-based View Maps
Xbarc101-3B locus 44.2 Wheat ABD - Wheat, SxS, FHB QTL, 2003 - Triticum-SxS-FHB-QTL/2003-3BS Xbarc101-3B locus 84 () Automated name-based View Maps
Wheat ABD - Wheat, Grandin x BR34 - Ta-Grandin/BR34-3B Xbarc101-3B locus 65.9 () Automated name-based View Maps
Wheat ABD - Wheat, Conan x Reeder - Conan/Reeder-3B Xbarc101-3B locus 40.48 () Automated name-based View Maps
Wheat ABD - Wheat, NxB, FHB QTL - Triticum-NxB-FHB-QTL/2003-3BS Xbarc101-3B locus 42 () Automated name-based View Maps
Xbarc164-3B locus 83.8 Wheat ABD - Wheat, Conan x Reeder - Conan/Reeder-3B Xbarc164-3B locus 68.14 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_3B Xbarc164-3B locus 0.56 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-3B Xbarc164-3B locus 81.5 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-3B Xbarc164-3B locus 70.3 () Automated name-based View Maps
Wheat AB - Durum wheat, Kofa x UC1113 - Kofa/UC1113-3B Xbarc164-3B locus 136.9 () Automated name-based View Maps
Xgwm108-3B locus 103.1 Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-3B Xgwm108-3B locus 96.1 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, update - Ta-Synthetic/Opata-update-3B Xgwm108-3B locus 275.7 () Automated name-based View Maps
Wheat ABD - Wheat_Yr80_2018 - Wheat_Yr80_2018-3BL Xgwm108-3B locus 51.1 (cM) Automated name-based View Maps
Wheat ABD - Wheat, WxM, FHB QTL - Triticum-WxM-FHB-QTL-3B Xgwm108-3B locus 147.2 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-3B Xgwm108-3B locus 103.4 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_3B Xgwm108-3B locus 0.11 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-3B Xgwm108-3B locus 94.4 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-3B Xgwm108-3B locus 153.6 () Automated name-based View Maps
Xcfd79.3-3B locus 5.1 Wheat ABD - Wheat, P91193D1 x P92201D5 - P91193D1/P92201D5-3B Xcfd79.3-3B locus 35.7 () Automated name-based View Maps
Xwmc500-3B locus 23.6 Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-3B Xwmc500-3B locus 32.3 () Automated name-based View Maps
Xwmc777-3B locus 65.7 Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-3B Xwmc777-3B locus 57.7 () Automated name-based View Maps
Xbarc344-3B locus 99.4 Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-3B Xbarc344-3B locus 85.3 () Automated name-based View Maps
QHt.wak-3B.1 qtl 44.2 - 65.7 No other positions
QHt.wak-3B.2 qtl 65.7 - 83.8 No other positions
QHt.wak-3B.3 qtl 83.8 - 99.4 No other positions

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.