*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Wheat ABD-Wheat, Louise x Penawawa
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Louise/Penawawa-3D
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
(Hide Advanced Menu)

Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Wheat ABD - Wheat, Louise x Penawawa [ View Map Set Info ]
Map Name: Louise/Penawawa-3D
Map Start: 0
Map Stop: 141.5
Features by Type:
12 locus
12 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 12 of 12.
Wheat ABD - Wheat, Louise x Penawawa - Louise/Penawawa-3D
(Click headers to resort)		 Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
Xgwm341-3D locus 64 Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-3D Xgwm341-3D locus 30.3 () Automated name-based View Maps
Wheat ABD - Wheat, P91193D1 x P92201D5 - P91193D1/P92201D5-3D Xgwm341-3D locus 38.6 () Automated name-based View Maps
Wheat ABD - Wheat, Conan x Reeder - Conan/Reeder-3D Xgwm341-3D locus 6.24 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, update - Ta-Synthetic/Opata-update-3D Xgwm341-3D locus 99.2 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-3D Xgwm341-3D locus 47.3 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_3D Xgwm341-3D locus -0.4 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-3D Xgwm341-3D locus 74.5 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-3D Xgwm341-3D locus 66.8 () Automated name-based View Maps
Wheat ABD - Wheat, Chinese Spring x SQ1 - CS/SQ1-3D Xgwm341-3D locus 68 () Automated name-based View Maps
Xgwm52-3D locus 47.7 Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-3D Xgwm52-3D locus 29.8 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-3D Xgwm52-3D locus 46.7 () Automated name-based View Maps
Wheat ABD - Wheat, P91193D1 x P92201D5 - P91193D1/P92201D5-3D Xgwm52-3D locus 52.6 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-3D Xgwm52-3D locus 80.05 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, update - Ta-Synthetic/Opata-update-3D Xgwm52-3D locus 112.7 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_3D Xgwm52-3D locus 0.54 () Automated name-based View Maps
Wheat ABD - Wheat, Chinese Spring x SQ1 - CS/SQ1-3D Xgwm52-3D locus 75.7 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-3D Xgwm52-3D locus 79.8 () Automated name-based View Maps
Xwmc492-3D locus 0 Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-3D Xwmc492-3D locus 23.5 () Automated name-based View Maps
Wheat ABD - Wheat, Conan x Reeder - Conan/Reeder-3D Xwmc492-3D locus 106.89 () Automated name-based View Maps
Xgwm3-3D locus 113.7 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-3D Xgwm3-3D locus 128.7 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-3D Xgwm3-3D locus 42.7 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, update - Ta-Synthetic/Opata-update-3D Xgwm3-3D locus 230.5 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-3D Xgwm3-3D locus 148.55 () Automated name-based View Maps
Wheat ABD - Wheat, Conan x Reeder - Conan/Reeder-3D Xgwm3-3D locus 254 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-3D Xgwm3-3D locus 78.8 () Automated name-based View Maps
Wheat ABD - Wheat, Sphaerococcoid Genes - Ta-Sphaerococcoid-3D Xgwm3-3D locus 168.3 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_3D Xgwm3-3D locus 0.14 () Automated name-based View Maps
Xwmc552-3D locus 108 Wheat ABD - Wheat, Conan x Reeder - Conan/Reeder-3D Xwmc552-3D locus 262.07 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-3D Xwmc552-3D locus 46.3 () Automated name-based View Maps
Xcfd9-3D locus 124.3 Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-3D Xcfd9-3D locus 35.7 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_3D Xcfd9-3D locus 0.9 () Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-3D Xcfd9-3D locus 204.8 () Automated name-based View Maps
Wheat ABD - Wheat, Courtot x Chinese Spring, GPW - Ta-Courtot/CS-GPW-3D Xcfd9-3D locus 227.1 () Automated name-based View Maps
Xgdm99-3D locus 25.5 Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-3D Xgdm99-3D locus 27.7 () Automated name-based View Maps
Xbarc1161-3D locus 37.2 Wheat ABD - Wheat_Consensus_2014_Ug99_Rust - Wheat_Consensus_2014_Ug99_Rust_3 barc1161 locus 51.87 () Automated name-based View Maps
Wheat ABD - Wheat-2014-Consensus-Ug99-Update - Wheat-2014-Consensus-Ug99-Update barc1161 locus 51.87 () Automated name-based View Maps
Xgdm136.1-3D locus 42.1 No other positions
Xbarc1119-3D locus 54.3 No other positions
Xbarc125-3D locus 56.9 Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-3D Xbarc125-3D locus 33.8 () Automated name-based View Maps
Xbarc71-3D locus 141.5 Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-3D Xbarc71-3D locus 78.6 () Automated name-based View Maps

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.