*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Wheat ABD-Wheat, Louise x Penawawa
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Louise/Penawawa-6A
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Wheat ABD - Wheat, Louise x Penawawa [ View Map Set Info ]
Map Name: Louise/Penawawa-6A
Map Start: 0
Map Stop: 91.7
Features by Type:
9 locus
9 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 9 of 9.
Wheat ABD - Wheat, Louise x Penawawa - Louise/Penawawa-6A
(Click headers to resort)
Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
Xbarc3-6A locus 91.7 Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-6A Xbarc3-6A locus 43.9 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_6A Xbarc3-6A locus -0.68 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-6A Xbarc3-6A locus 47.4 () Automated name-based View Maps
Wheat ABD - Wheat, Chinese Spring x SQ1 - CS/SQ1-6A Xbarc3-6A locus 119.4 () Automated name-based View Maps
Xwmc256-6A locus 77.9 Wheat ABD - Wheat, Synthetic x Opata, SSR 2 - Ta-Synthetic/Opata-SSR2-6A Xwmc256-6A locus 87.4 () Automated name-based View Maps
Wheat ABD - Wheat, Chinese Spring x SQ1 - CS/SQ1-6A Xwmc256-6A locus 131.9 () Automated name-based View Maps
Wheat AB - Durum wheat, Kofa x UC1113 - Kofa/UC1113-6A Xwmc256-6A locus 57.4 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-6A Xwmc256-6A locus 89.9 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-6A Xwmc256-6A locus 40.4 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_6A Xwmc256-6A locus 0.72 () Automated name-based View Maps
Xwmc417-6A locus 45.4 Wheat ABD - Wheat, Chinese Spring x SQ1 - CS/SQ1-6A Xwmc417-6A locus 165.4 () Automated name-based View Maps
Wheat A - T. boeoticum x monococcum - T.b.xT.m.-6A Xwmc417-6A locus 46.2 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-6A Xwmc417-6A locus 86.2 () Automated name-based View Maps
Xgwm169-6A locus 47.4 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-6A Xgwm169-6A locus 123.3 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-6A Xgwm169-6A locus 99 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-6A Xgwm169-6A locus 82.6 () Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-6A Xgwm169-6A locus 156.5 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_6A Xgwm169-6A locus 0.95 () Automated name-based View Maps
Wheat AB - Durum wheat, Kofa x UC1113 - Kofa/UC1113-6A Xgwm169-6A locus 92.6 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-6A Xgwm169-6A locus 116.5 () Automated name-based View Maps
Wheat ABD - Wheat, Courtot x Chinese Spring, GPW - Ta-Courtot/CS-GPW-6A Xgwm169-6A locus 147.4 () Automated name-based View Maps
Xcfa2114-6A locus 27.1 Wheat ABD - Wheat, P91193D1 x P92201D5 - P91193D1/P92201D5-6A Xcfa2114-6A locus 74.3 () Automated name-based View Maps
Wheat ABD - Wheat, Courtot x Chinese Spring, GPW - Ta-Courtot/CS-GPW-6A Xcfa2114-6A locus 171.8 () Automated name-based View Maps
Xwmc621-6A locus 0 Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-6A Xwmc621-6A locus 114.5 () Automated name-based View Maps
Xgwm617.2-6A locus 27.4 No other positions
Xwmc179.2-6A locus 69.6 No other positions
Xwmc684-6A locus 76.4 Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-6A Xwmc684-6A locus 45.8 () Automated name-based View Maps

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.