*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Wheat ABD-Wheat, NxC, FHB QTL
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Triticum-NxC-FHB-QTL-3BS
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
locus
qtl
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
(Hide Advanced Menu)

Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Wheat ABD - Wheat, NxC, FHB QTL [ View Map Set Info ]
Map Name: Triticum-NxC-FHB-QTL-3BS
Map Start: 0
Map Stop: 47.5
Features by Type:
17 locus
1 qtl
18 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 18 of 18.
Wheat ABD - Wheat, NxC, FHB QTL - Triticum-NxC-FHB-QTL-3BS
(Click headers to resort)		 Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
Xgwm533-3B locus 38.5 Wheat ABD - Wheat, P91193D1 x P92201D5 - P91193D1/P92201D5-3B Xgwm533-3B locus 24.5 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_3B Xgwm533-3B locus -0.68 () Automated name-based View Maps
Wheat ABD - Wheat, Chinese Spring x SQ1 - CS/SQ1-3B Xgwm533-3B locus 10.6 () Automated name-based View Maps
Wheat ABD - Wheat, NxB, FHB QTL - Triticum-NxB-FHB-QTL/2003-3BS Xgwm533-3B locus 10 () Automated name-based View Maps
Wheat ABD - Wheat, USG3209 x Jaypee - USG3209/Jaypee-3B Xgwm533-3B locus 56.5 () Automated name-based View Maps
Wheat ABD - Wheat, Conan x Reeder - Conan/Reeder-3B Xgwm533-3B locus 11.82 () Automated name-based View Maps
Wheat ABD - Wheat, WxM, FHB QTL - Triticum-WxM-FHB-QTL-3B Xgwm533-3B locus 7.5 () Automated name-based View Maps
Xgwm389-3B locus 45.5 Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-3B Xgwm389-3B locus 3.5 () Automated name-based View Maps
Wheat ABD - Wheat, SxS, FHB QTL, 2003 - Triticum-SxS-FHB-QTL/2003-3BS Xgwm389-3B locus 8 () Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-3B Xgwm389-3B locus 0 () Automated name-based View Maps
Wheat ABD - Wheat, FHB QTL, Physical - Triticum-FHB-QTL-physical-3BS Xgwm389-3B locus -95 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, update - Ta-Synthetic/Opata-update-3B Xgwm389-3B locus 4.7 () Automated name-based View Maps
Wheat ABD - Wheat, Conan x Reeder - Conan/Reeder-3B Xgwm389-3B locus 0 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_3B Xgwm389-3B locus -0.68 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-3B Xgwm389-3B locus 5 () Automated name-based View Maps
Wheat AB - T. turgidum, JK x Cham1 - Tturgidum-JKxC-3B Xgwm389-3B locus 0 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-3B Xgwm389-3B locus 0.7 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides, SSR - Tturgidum-SSR-3B Xgwm389-3B locus -81.1 () Automated name-based View Maps
Wheat ABD - Wheat, WxM, FHB QTL - Triticum-WxM-FHB-QTL-3B Xgwm389-3B locus 0 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-3B Xgwm389-3B locus 1.7 () Automated name-based View Maps
Wheat AB - Durum wheat, Kofa x UC1113 - Kofa/UC1113-3B Xgwm389-3B locus 0 () Automated name-based View Maps
Wheat ABD - Wheat, NxB, FHB QTL - Triticum-NxB-FHB-QTL/2003-3BS Xgwm389-3B locus 0 () Automated name-based View Maps
Wheat AB - T. turgidum, JK x Cham1, 2 - Tturgidum-JKxC2-3B Xgwm389-3B locus 0 () Automated name-based View Maps
Wheat ABD - Wheat, Sphaerococcoid Genes - Ta-Sphaerococcoid-3B Xgwm389-3B locus 0 () Automated name-based View Maps
pAGT.CTG57-3B locus 41.5 No other positions
pACT.CTG136-3B locus 37 No other positions
SRST.3B1(pAG.CAA244)-3B locus 43.5 No other positions
pAG.GCG162-3B locus 0 No other positions
GTG.CTT262-3B locus 7.5 No other positions
GCTG.CTC375-3B locus 15.5 No other positions
AAC.CTG170-3B locus 18 No other positions
pAG.CAT138-3B locus 19 No other positions
CTCG.CTC135-3B locus 26.5 No other positions
AAG.AGC185-3B locus 29 No other positions
ACT.TGC97-3B locus 31 No other positions
GCTG.CGAC205-3B locus 35.5 No other positions
CTCG.AGC520-3B locus 40 No other positions
AAC.CGAC305-3B locus 46.5 No other positions
GTG.CAGT100-3B locus 47.5 No other positions
QFhs.ndsu-3BS qtl 37 - 43.5 Wheat ABD - Wheat, NxB, FHB QTL - Triticum-NxB-FHB-QTL/2003-3BS QFhs.ndsu-3BS qtl 0 - 32 () Automated name-based View Maps
Wheat ABD - Wheat, Composite, 2004 - Wheat-Composite2004-3B QFhs.ndsu-3BS qtl 16 - 20 () Automated name-based View Maps
Wheat ABD - Wheat, SxS, FHB QTL, 2003 - Triticum-SxS-FHB-QTL/2003-3BS QFhs.ndsu-3BS qtl 0 - 50 () Automated name-based View Maps
Wheat ABD - Wheat, FHB QTL, Physical - Triticum-FHB-QTL-physical-3BS QFhs.ndsu-3BS qtl -87 - -78 () Automated name-based View Maps

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.