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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
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Map Set Wheat ABD-Wheat, Physical
(Reference Set)
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Maps Ta-Physical-Gill-3D
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Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
baccontig
breakpoint
breakpointinterval
chromband
locus
Other
 
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Features:		 No Yes
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 Correspondence Options
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Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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Map Size: tiny small medium large Custom
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Size of Dot Plot Pixels: 1
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Same Scale:		 No Yes
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Menu Order of Comparative Maps: Predefined
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Sanity Check:		 No Yes
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Map Details

Map Type: Cytogenetic [ View Map Type Info ]
Map Set Name: Wheat ABD - Wheat, Physical [ View Map Set Info ]
Map Name: Ta-Physical-Gill-3D
Map Start: -4.5
Map Stop: 6.2
Features by Type:
15 baccontig
6 breakpoint
6 breakpointinterval
15 chromband
27 locus
69 Total

Map Features

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Items 26 to 50 of 69.       Previous | of 3 | Next
Wheat ABD - Wheat, Physical - Ta-Physical-Gill-3D
(Click headers to resort)		 Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
Xglk718 locus 2.94 Wheat ABD - Wheat, Physical - Ta-Physical-Gill-3ABD Xglk718 locus 89 () Automated name-based View Maps
XksuG48 locus 2.94 Wheat ABD - Wheat, Composite, 2004 - Wheat-Composite2004-6A XksuG48 locus 34 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Physical - Ta-Physical-Gill-3ABD XksuG48 locus 82 () Automated name-based View Maps
Wheat A - T. monococcum, DV92 x G3116 - Tm-Dubcovsky2-6A XksuG48 locus -27.1 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Physical - Ta-Physical-Gill-6ABD XksuG48 locus -86 () Automated name-based View Maps
Wheat ABD - Wheat, Physical - Ta-Physical-Gill-6D XksuG48 locus -3.05 () Automated name-based View Maps
0/3DS-1 breakpointinterval -4.5 - -1.67 No other positions
3DS-1/3DS-2 breakpointinterval -1.67 - -1.18 No other positions
3DS-2/Cent breakpointinterval -1.18 - 0 No other positions
Cent/3DL-1 breakpointinterval 0 - 1.34 No other positions
3DL-1/3DL-2 breakpointinterval 1.34 - 1.69 No other positions
3DL-2/0 breakpointinterval 1.69 - 6.2 No other positions
3DL1.4 chromband 3.8 - 5.3 Wheat ABD - Wheat C-bands - CS-Cyto-3D 3DL1.4 chromband 3.8 - 5.3 () Automated name-based View Maps
3DS1.4 chromband -2.9 - -1.5 Wheat ABD - Wheat C-bands - CS-Cyto-3D 3DS1.4 chromband -2.9 - -1.5 () Automated name-based View Maps
3DS1.2 chromband -1.4 - 0 Wheat ABD - Wheat C-bands - CS-Cyto-3D 3DS1.2 chromband -1.4 - 0 () Automated name-based View Maps
Cent-3D chromband -0.05 - 0.05 Wheat ABD - Wheat C-bands - CS-Cyto-3D Cent-3D chromband -0.05 - 0.05 () Automated name-based View Maps
3DL1.2 chromband 0 - 3.7 Wheat ABD - Wheat C-bands - CS-Cyto-3D 3DL1.2 chromband 0 - 3.7 () Automated name-based View Maps
3DS1.3 chromband -1.5 - -1.4 Wheat ABD - Wheat C-bands - CS-Cyto-3D 3DS1.3 chromband -1.5 - -1.4 () Automated name-based View Maps
3DS1.5 chromband -3 - -2.9 Wheat ABD - Wheat C-bands - CS-Cyto-3D 3DS1.5 chromband -3 - -2.9 () Automated name-based View Maps
3DS1.6 chromband -3.4 - -3 Wheat ABD - Wheat C-bands - CS-Cyto-3D 3DS1.6 chromband -3.4 - -3 () Automated name-based View Maps
3DS1.7 chromband -3.9 - -3.4 Wheat ABD - Wheat C-bands - CS-Cyto-3D 3DS1.7 chromband -3.9 - -3.4 () Automated name-based View Maps
3DS1.8 chromband -4.1 - -3.9 Wheat ABD - Wheat C-bands - CS-Cyto-3D 3DS1.8 chromband -4.1 - -3.9 () Automated name-based View Maps
3DS1.9 chromband -4.5 - -4.1 Wheat ABD - Wheat C-bands - CS-Cyto-3D 3DS1.9 chromband -4.5 - -4.1 () Automated name-based View Maps
3DL1.3 chromband 3.7 - 3.8 Wheat ABD - Wheat C-bands - CS-Cyto-3D 3DL1.3 chromband 3.7 - 3.8 () Automated name-based View Maps
3DL1.5 chromband 5.3 - 5.4 Wheat ABD - Wheat C-bands - CS-Cyto-3D 3DL1.5 chromband 5.3 - 5.4 () Automated name-based View Maps
3DL1.6 chromband 5.4 - 6.1 Wheat ABD - Wheat C-bands - CS-Cyto-3D 3DL1.6 chromband 5.4 - 6.1 () Automated name-based View Maps
3DL1.7 chromband 6.1 - 6.2 Wheat ABD - Wheat C-bands - CS-Cyto-3D 3DL1.7 chromband 6.1 - 6.2 () Automated name-based View Maps
3DL-3 breakpoint 5.02 Wheat ABD - Wheat, Physical, R Genes - Ta-Physical-RGenes-3D 3DL-3 breakpoint 81 () Automated name-based View Maps
3DS-1 breakpoint -1.67 Wheat ABD - Wheat, Physical, R Genes - Ta-Physical-RGenes-3D 3DS-1 breakpoint -39 () Automated name-based View Maps

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