*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Wheat ABD-Wheat, Physical
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Ta-Physical-Gill-6ABD
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
breakpoint
breakpointinterval
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Cytogenetic [ View Map Type Info ]
Map Set Name: Wheat ABD - Wheat, Physical [ View Map Set Info ]
Map Name: Ta-Physical-Gill-6ABD
Map Start: -100.00
Map Stop: 100.00
Features by Type:
20 breakpoint
21 breakpointinterval
36 locus
77 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 26 to 50 of 77.       Previous | of 4 | Next
Wheat ABD - Wheat, Physical - Ta-Physical-Gill-6ABD
(Click headers to resort)
Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
XksuD1.1 locus 65.00 No other positions
Xwg341.1 locus 66.00 No other positions
Xwg286.1 locus 68.00 No other positions
Xwg341.2 locus 75.00 No other positions
Xcsb112(Dhn5).1 locus 75.00 No other positions
Xwg286.2 locus 86.00 No other positions
XksuD1.2 locus 95.00 No other positions
Xcsb112(Dhn5).2 locus 95.00 No other positions
XksuD27 locus 95.00 Rye - Rye_2009_consensus - Rye-2009-Consensus-6R XksuD27 locus 72.50 () Automated name-based, Automated name-based View Maps
Rye - Rye, Ds2 x RxL10 - Secale-Devos-6R XksuD27 locus 38.10 () Automated name-based, Automated name-based View Maps
XksuG51 locus 95.00 No other positions
XksuM90 locus -86.00 No other positions
6L-0.35-0.37 breakpointinterval 35.00 - 37.00 No other positions
6L-0.40-0.42 breakpointinterval 40.00 - 42.00 No other positions
6L-0.44-0.47 breakpointinterval 44.00 - 47.00 No other positions
6L-0.07-0.08 breakpointinterval 7.00 - 8.00 No other positions
6L-0.64-0.65 breakpointinterval 64.00 - 65.00 No other positions
6L-0.65-0.66 breakpointinterval 65.00 - 66.00 No other positions
6L-0.66-0.70 breakpointinterval 66.00 - 70.00 No other positions
6L-0.70-0.80 breakpointinterval 70.00 - 80.00 No other positions
6L-0.83-0.89 breakpointinterval 83.00 - 89.00 No other positions
6L-0.89-1.00 breakpointinterval 89.00 - 100.00 No other positions
6S-0.50-0.54 breakpointinterval -54.00 - -50.00 No other positions
6S-0.54-0.70 breakpointinterval -70.00 - -54.00 No other positions
6S-0.72-1.00 breakpointinterval -100.00 - -72.00 No other positions
C-6L-0.07 breakpointinterval 0.00 - 7.00 No other positions

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.