*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Wheat ABD-Wheat, Physical, SSR
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Chinese_Spring_Deletion_SSR_5A
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
breakpointinterval
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Cytogenetic [ View Map Type Info ]
Map Set Name: Wheat ABD - Wheat, Physical, SSR [ View Map Set Info ]
Map Name: Chinese_Spring_Deletion_SSR_5A
Map Start: -1.00
Map Stop: 1.00
Features by Type:
10 breakpointinterval
38 locus
48 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 48.       of 2 | Next
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_5A
(Click headers to resort)
Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
Xbarc117-5A locus -0.86 Wheat A - T. boeoticum x monococcum - T.b.xT.m.-5A Xbarc117-5A locus 21.90 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-5A Xbarc117-5A locus 58.00 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-5A Xbarc117-5A locus 18.80 () Automated name-based View Maps
Wheat ABD - Wheat, P91193D1 x P92201D5 - P91193D1/P92201D5-5A Xbarc117-5A locus 87.00 () Automated name-based View Maps
Wheat ABD - Wheat, Conan x Reeder - Conan/Reeder-5A Xbarc117-5A locus 27.05 () Automated name-based View Maps
Wheat AB - Durum wheat, Kofa x UC1113 - Kofa/UC1113-5A Xbarc117-5A locus 51.40 () Automated name-based View Maps
Wheat ABD - Wheat, Chinese Spring x SQ1 - CS/SQ1-5A Xbarc117-5A locus 29.00 () Automated name-based View Maps
Xgwm129-5A locus -0.20 Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-5A Xgwm129-5A locus 20.50 () Automated name-based View Maps
Wheat ABD - Wheat, WxM, FHB QTL - Triticum-WxM-FHB-QTL-5A Xgwm129-5A locus 0.00 () Automated name-based View Maps
Wheat ABD - Wheat, Chinese Spring x SQ1 - CS/SQ1-5A Xgwm129-5A locus 29.00 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-5A Xgwm129-5A locus 43.10 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-5A Xgwm129-5A locus 9.95 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-5A Xgwm129-5A locus 54.80 () Automated name-based View Maps
Xgwm293-5A locus -0.57 Wheat AB - Durum wheat, Kofa x UC1113 - Kofa/UC1113-5A Xgwm293-5A locus 51.40 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-5A Xgwm293-5A locus 10.55 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-5A Xgwm293-5A locus 52.10 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-5A Xgwm293-5A locus 22.70 () Automated name-based View Maps
Wheat ABD - Wheat, Chinese Spring x SQ1 - CS/SQ1-5A Xgwm293-5A locus 29.00 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides, SSR - Tturgidum-SSR-5A Xgwm293-5A locus -15.30 () Automated name-based View Maps
Xbarc1-5A locus 0.46 Wheat ABD - Wheat, Chinese Spring x SQ1 - CS/SQ1-5A Xbarc1-5A locus 29.00 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-5A Xbarc1-5A locus 34.20 () Automated name-based View Maps
Wheat A - T. boeoticum x monococcum - T.b.xT.m.-5A Xbarc1-5A locus 18.70 () Automated name-based View Maps
Xbarc141-5A locus 0.46 Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-5A Xbarc141-5A locus 63.90 () Automated name-based View Maps
Wheat ABD - Wheat, Chinese Spring x SQ1 - CS/SQ1-5A Xbarc141-5A locus 46.50 () Automated name-based View Maps
Wheat ABD - Wheat, Conan x Reeder - Conan/Reeder-5A Xbarc141-5A locus 45.33 () Automated name-based View Maps
Wheat A - T. boeoticum x monococcum - T.b.xT.m.-5A Xbarc141-5A locus 83.00 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-5A Xbarc141-5A locus 45.30 () Automated name-based View Maps
Xbarc56-5A locus -0.86 Wheat ABD - Wheat, Conan x Reeder - Conan/Reeder-5A Xbarc56-5A locus 23.27 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-5A Xbarc56-5A locus 60.70 () Automated name-based View Maps
Wheat ABD - Wheat, USG3209 x Jaypee - USG3209/Jaypee-5A Xbarc56-5A locus 41.70 () Automated name-based View Maps
Xgwm186-5A locus 0.18 Wheat ABD - Wheat, P91193D1 x P92201D5 - P91193D1/P92201D5-5A Xgwm186-5A locus 129.70 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides, SSR - Tturgidum-SSR-5A Xgwm186-5A locus 29.30 () Automated name-based View Maps
Wheat A - T. boeoticum x monococcum - T.b.xT.m.-5A Xgwm186-5A locus 88.00 () Automated name-based View Maps
Wheat ABD - Wheat, Conan x Reeder - Conan/Reeder-5A Xgwm186-5A locus 44.05 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-5A Xgwm186-5A locus 64.10 () Automated name-based View Maps
Wheat ABD - Wheat, Louise x Penawawa - Louise/Penawawa-5A Xgwm186-5A locus 43.40 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-5A Xgwm186-5A locus 75.80 () Automated name-based View Maps
Wheat AB - T. turgidum, Omrabi5 x dicoccoides, QTL - Tt-Oxd-QTL-5A Xgwm186-5A locus 76.50 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-5A Xgwm186-5A locus 42.30 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-5A Xgwm186-5A locus 64.40 () Automated name-based View Maps
Xgdm109-5A locus 0.18 Wheat ABD - Wheat, WxM, FHB QTL - Triticum-WxM-FHB-QTL-5A Xgdm109-5A locus 41.40 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-5A Xgdm109-5A locus 34.00 () Automated name-based View Maps
Xgwm205-5A locus -0.86 Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-5A Xgwm205-5A locus 5.90 () Automated name-based View Maps
Wheat ABD - Wheat, Louise x Penawawa - Louise/Penawawa-5A Xgwm205-5A locus 118.00 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-5A Xgwm205-5A locus 10.15 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-5A Xgwm205-5A locus 22.20 () Automated name-based View Maps
Wheat ABD - Wheat, WxM, FHB QTL - Triticum-WxM-FHB-QTL-5A Xgwm205-5A locus 44.40 () Automated name-based View Maps
Wheat ABD - Wheat, P91193D1 x P92201D5 - P91193D1/P92201D5-5A Xgwm205-5A locus 38.90 () Automated name-based View Maps
Wheat ABD - Wheat, Courtot x Chinese Spring, GPW - Ta-Courtot/CS-GPW-5A Xgwm205-5A locus 27.20 () Automated name-based View Maps
Wheat A - T. boeoticum x monococcum - T.b.xT.m.-5A Xgwm205-5A locus 60.60 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-5A Xgwm205-5A locus 32.80 () Automated name-based View Maps
Xcfa2250-5A locus -0.20 Wheat ABD - Wheat, Courtot x Chinese Spring, GPW - Ta-Courtot/CS-GPW-5A Xcfa2250-5A locus 45.40 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-5A Xcfa2250-5A locus 56.20 () Automated name-based View Maps
Xcfa2163-5A locus 0.68 Wheat ABD - Wheat, Courtot x Chinese Spring, GPW - Ta-Courtot/CS-GPW-5A Xcfa2163-5A locus 177.20 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-5A Xcfa2163-5A locus 104.30 () Automated name-based View Maps
Wheat ABD - Wheat, Grandin x BR34 - Ta-Grandin/BR34-5A Xcfa2163-5A locus 99.70 () Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-5A Xcfa2163-5A locus 137.20 () Automated name-based View Maps
Wheat A - T. boeoticum x monococcum - T.b.xT.m.-5A Xcfa2163-5A locus 150.00 () Automated name-based View Maps
Xcfa2155-5A locus 0.82 Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-5A Xcfa2155-5A locus 103.10 () Automated name-based View Maps
Wheat ABD - Wheat, Courtot x Chinese Spring, GPW - Ta-Courtot/CS-GPW-5A Xcfa2155-5A locus 188.50 () Automated name-based View Maps
Xcfa2187-5A locus -0.86 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-5A Xcfa2187-5A locus -8.40 () Automated name-based View Maps
Xgwm154-5A locus -0.86 Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-5A Xgwm154-5A locus 34.30 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-5A Xgwm154-5A locus 10.35 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-5A Xgwm154-5A locus 22.20 () Automated name-based View Maps
Wheat ABD - Wheat, WxM, FHB QTL - Triticum-WxM-FHB-QTL-5A Xgwm154-5A locus 28.00 () Automated name-based View Maps
Wheat A - T. boeoticum x monococcum - T.b.xT.m.-5A Xgwm154-5A locus 64.30 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR 2 - Ta-Synthetic/Opata-SSR2-5A Xgwm154-5A locus 21.30 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-5A Xgwm154-5A locus 4.10 () Automated name-based View Maps
Xgwm415-5A locus -0.20 Wheat ABD - Wheat, P91193D1 x P92201D5 - P91193D1/P92201D5-5A Xgwm415-5A locus 98.40 () Automated name-based View Maps
Wheat ABD - Wheat, USG3209 x Jaypee - USG3209/Jaypee-5A Xgwm415-5A locus 25.60 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-5A Xgwm415-5A locus 54.70 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-5A Xgwm415-5A locus 44.60 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-5A Xgwm415-5A locus 9.75 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-5A Xgwm415-5A locus 21.00 () Automated name-based View Maps
Xgwm304-5A locus -0.20 Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-5A Xgwm304-5A locus 0.00 () Automated name-based View Maps
Wheat AB - Durum wheat, Kofa x UC1113 - Kofa/UC1113-5A Xgwm304-5A locus 51.40 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides, SSR - Tturgidum-SSR-5A Xgwm304-5A locus -15.30 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-5A Xgwm304-5A locus 15.80 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-5A Xgwm304-5A locus 47.90 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-5A Xgwm304-5A locus 63.50 () Automated name-based View Maps
Xgwm156-5A locus 0.18 Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-5A Xgwm156-5A locus 47.05 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides, SSR - Tturgidum-SSR-5A Xgwm156-5A locus 16.60 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-5A Xgwm156-5A locus 60.70 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-5A Xgwm156-5A locus 72.20 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-5A Xgwm156-5A locus 39.10 () Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-5A Xgwm156-5A locus 47.10 () Automated name-based View Maps
Xcfa2141-5A locus 0.82 Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-5A Xcfa2141-5A locus 136.40 () Automated name-based View Maps
Wheat A - T. boeoticum x monococcum - T.b.xT.m.-5A Xcfa2141-5A locus 150.90 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-5A Xcfa2141-5A locus 106.40 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-5A Xcfa2141-5A locus 135.30 () Automated name-based View Maps
Xcfd39-5A locus 0.94 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-5A Xcfd39-5A locus 152.80 () Automated name-based View Maps
Wheat A - T. boeoticum x monococcum - T.b.xT.m.-5A Xcfd39-5A locus 201.40 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-5A Xcfd39-5A locus 142.00 () Automated name-based View Maps
Xgpw2172-5A locus 0.94 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-5A Xgpw2172-5A locus 153.40 () Automated name-based View Maps
Xbarc100-5A locus 0.46 Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-5A Xbarc100-5A locus 31.80 () Automated name-based View Maps
Wheat ABD - Wheat, Grandin x BR34 - Ta-Grandin/BR34-5A Xbarc100-5A locus 47.10 () Automated name-based View Maps
Xgwm666-5A locus 0.68 Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-5A Xgwm666-5A locus 95.30 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-5A Xgwm666-5A locus 90.30 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-5A Xgwm666-5A locus 69.30 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-5A Xgwm666-5A locus 105.00 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides, SSR - Tturgidum-SSR-5A Xgwm666-5A locus 69.50 () Automated name-based View Maps
Xgwm617-5A locus 0.68 Wheat ABD - Wheat, WxM, FHB QTL - Triticum-WxM-FHB-QTL-5A Xgwm617-5A locus 94.40 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-5A Xgwm617-5A locus 95.40 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-5A Xgwm617-5A locus 57.60 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-5A Xgwm617-5A locus 76.30 () Automated name-based View Maps
Xbarc40-5A locus 0.46 Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-5A Xbarc40-5A locus 33.90 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-5A Xbarc40-5A locus 69.90 () Automated name-based View Maps
Xbarc122-5A locus 0.18 Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-5A Xbarc122-5A locus 0.00 () Automated name-based View Maps

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.