*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Wheat ABD-Wheat, Physical, SSR
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Chinese_Spring_Deletion_SSR_6B
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
breakpointinterval
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Cytogenetic [ View Map Type Info ]
Map Set Name: Wheat ABD - Wheat, Physical, SSR [ View Map Set Info ]
Map Name: Chinese_Spring_Deletion_SSR_6B
Map Start: -1.5
Map Stop: 1
Features by Type:
9 breakpointinterval
29 locus
38 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 38.       of 2 | Next
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_6B
(Click headers to resort)
Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
Xgwm191-6B locus -0.38 Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-6B Xgwm191-6B locus 35.6 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-6B Xgwm191-6B locus 38.4 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-6B Xgwm191-6B locus 33.7 () Automated name-based View Maps
Wheat ABD - Wheat, Chinese Spring x SQ1 - CS/SQ1-6B Xgwm191-6B locus 68.6 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-6B Xgwm191-6B locus 53.35 () Automated name-based View Maps
Xgwm219-6B locus 0.7 Wheat ABD - Wheat, Louise x Penawawa - Louise/Penawawa-6B Xgwm219-6B locus 56.3 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-6B Xgwm219-6B locus 98.7 () Automated name-based View Maps
Wheat AB - Durum wheat, Kofa x UC1113 - Kofa/UC1113-6B Xgwm219-6B locus 115.5 () Automated name-based View Maps
Wheat AB - T. turgidum, Omrabi5 x dicoccoides, QTL - Tt-Oxd-QTL-6B Xgwm219-6B locus 168.6 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-6B Xgwm219-6B locus 59.3 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-6B Xgwm219-6B locus 62.6 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-6B Xgwm219-6B locus 73.4 () Automated name-based View Maps
Wheat ABD - Wheat, Chinese Spring x SQ1 - CS/SQ1-6B Xgwm219-6B locus 105.8 () Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-6B Xgwm219-6B locus 47.7 () Automated name-based View Maps
Xbarc178-6B locus 0.7 Wheat ABD - Wheat, Louise x Penawawa - Louise/Penawawa-6B Xbarc178-6B locus 78.4 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-6B Xbarc178-6B locus 59.7 () Automated name-based View Maps
Wheat ABD - Wheat, Grandin x BR34 - Ta-Grandin/BR34-6B Xbarc178-6B locus 121.5 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-6B Xbarc178-6B locus 57.4 () Automated name-based View Maps
Wheat ABD - Wheat, Chinese Spring x SQ1 - CS/SQ1-6B Xbarc178-6B locus 107 () Automated name-based View Maps
Xgwm132-6B locus -1.27 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-6B Xgwm132-6B locus 17.6 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-6B Xgwm132-6B locus 16.8 () Automated name-based View Maps
Wheat ABD - Wheat, Louise x Penawawa - Louise/Penawawa-6B Xgwm132-6B locus 15.2 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-6B Xgwm132-6B locus 10.75 () Automated name-based View Maps
Wheat ABD - Wheat, Conan x Reeder - Conan/Reeder-6B Xgwm132-6B locus 35.18 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides, SSR - Tturgidum-SSR-6B Xgwm132-6B locus -34.7 () Automated name-based View Maps
Xgwm193-6B locus 0.18 Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-6B Xgwm193-6B locus 36.3 () Automated name-based View Maps
Wheat AB - T. turgidum, Omrabi5 x dicoccoides, QTL - Tt-Oxd-QTL-6B Xgwm193-6B locus 123.3 () Automated name-based View Maps
Wheat ABD - Wheat, Conan x Reeder - Conan/Reeder-6B Xgwm193-6B locus 54.86 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-6B Xgwm193-6B locus 35.2 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-6B Xgwm193-6B locus 49.7 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-6B Xgwm193-6B locus 33.1 () Automated name-based View Maps
Xgwm88-6B locus 0.18 Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-6B Xgwm88-6B locus 41 () Automated name-based View Maps
Wheat ABD - Wheat, Conan x Reeder - Conan/Reeder-6B Xgwm88-6B locus 60.31 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-6B Xgwm88-6B locus 35.9 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-6B Xgwm88-6B locus 55.65 () Automated name-based View Maps
Xgdm147-6B locus 0.7 No other positions
Xcfd13-6B locus -1.27 Wheat ABD - Wheat, Courtot x Chinese Spring, GPW - Ta-Courtot/CS-GPW-6B Xcfd13-6B locus 22.1 () Automated name-based View Maps
Wheat ABD - Wheat, Louise x Penawawa - Louise/Penawawa-6B Xcfd13-6B locus 0 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-6B Xcfd13-6B locus 38.4 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-6B Xcfd13-6B locus 13.8 () Automated name-based View Maps
Xgwm608-6B locus 0.2 Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-6B Xgwm608-6B locus 45.4 () Automated name-based View Maps
Wheat ABD - Wheat, Courtot x Chinese Spring, GPW - Ta-Courtot/CS-GPW-6B Xgwm608-6B locus 111.1 () Automated name-based View Maps
Xgpw1079-6B locus -1.27 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-6B Xgpw1079-6B locus 12.2 () Automated name-based View Maps
Xgwm518-6B locus -1.27 Wheat AB - T. turgidum, Omrabi5 x dicoccoides, QTL - Tt-Oxd-QTL-6B Xgwm518-6B locus 78.9 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-6B Xgwm518-6B locus 27.3 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-6B Xgwm518-6B locus 24.2 () Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-6B Xgwm518-6B locus 19.1 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-6B Xgwm518-6B locus 30.5 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides, SSR - Tturgidum-SSR-6B Xgwm518-6B locus -20.3 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-6B Xgwm518-6B locus 39.1 () Automated name-based View Maps
Xgwm508-6B locus -0.91 Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-6B Xgwm508-6B locus 32.2 () Automated name-based View Maps
Wheat ABD - Wheat, Grandin x BR34 - Ta-Grandin/BR34-6B Xgwm508-6B locus 56 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-6B Xgwm508-6B locus 33.2 () Automated name-based View Maps
Wheat ABD - Wheat, Louise x Penawawa - Louise/Penawawa-6B Xgwm508-6B locus 17.8 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-6B Xgwm508-6B locus 32.1 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-6B Xgwm508-6B locus 30.2 () Automated name-based View Maps
Wheat AB - T. turgidum, Omrabi5 x dicoccoides, QTL - Tt-Oxd-QTL-6B Xgwm508-6B locus 61.9 () Automated name-based View Maps
Xgwm133-6B locus -0.38 Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-6B Xgwm133-6B locus 27.7 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-6B Xgwm133-6B locus 33.2 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-6B Xgwm133-6B locus 37.1 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-6B Xgwm133-6B locus 49.3 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-6B Xgwm133-6B locus 31.6 () Automated name-based View Maps
Xgwm361-6B locus 0.2 Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-6B Xgwm361-6B locus 49.5 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-6B Xgwm361-6B locus 36.7 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-6B Xgwm361-6B locus 33.8 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-6B Xgwm361-6B locus 37.7 () Automated name-based View Maps
Xgwm70-6B locus -0.38 Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-6B Xgwm70-6B locus 35.2 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-6B Xgwm70-6B locus 42.2 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-6B Xgwm70-6B locus 38 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-6B Xgwm70-6B locus 53.15 () Automated name-based View Maps
Xgwm644-6B locus -0.38 Wheat AB - T. turgidum, JK x Cham1, 2 - Tturgidum-JKxC2-6B Xgwm644-6B locus 280.8 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-6B Xgwm644-6B locus 38.7 () Automated name-based View Maps
Wheat ABD - Wheat_Yr78_2017 - Wheat_Yr78_2017-6B Xgwm644-6B locus 49.8 (cM) Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-6B Xgwm644-6B locus 52.2 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-6B Xgwm644-6B locus 32.5 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-6B Xgwm644-6B locus 38.9 () Automated name-based View Maps
Wheat AB - T. turgidum, JK x Cham1 - Tturgidum-JKxC-6B Xgwm644-6B locus 136.6 () Automated name-based View Maps
Xgpw5023-6B locus -0.75 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-6B Xgpw5023-6B locus 47.5 () Automated name-based View Maps
Xgpw3252-6B locus -0.75 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-6B Xgpw3252-6B locus 48.1 () Automated name-based View Maps
Xgpw5130-6B locus 0.38 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-6B Xgpw5130-6B locus 49.9 () Automated name-based View Maps
Xwmc182-6B locus 0.7 Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-6B Xwmc182-6B locus 43.8 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR 2 - Ta-Synthetic/Opata-SSR2-6B Xwmc182-6B locus 63.8 () Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-6B Xwmc182-6B locus 30.4 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-6B Xwmc182-6B locus 51.9 () Automated name-based View Maps
Xbarc198-6B locus -0.38 Wheat AB - Durum wheat, Kofa x UC1113 - Kofa/UC1113-6B Xbarc198-6B locus 59.8 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-6B Xbarc198-6B locus 31.9 () Automated name-based View Maps
Wheat ABD - Wheat_Yr78_2017 - Wheat_Yr78_2017-6B Xbarc198-6B locus 50.9 (cM) Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-6B Xbarc198-6B locus 44.1 () Automated name-based View Maps
Xbarc134-6B locus -1.27 Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-6B Xbarc134-6B locus 82.4 () Automated name-based View Maps
Wheat AB - Durum wheat, Kofa x UC1113 - Kofa/UC1113-6B Xbarc134-6B locus 139 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-6B Xbarc134-6B locus 71 () Automated name-based View Maps
Wheat ABD - Wheat, P91193D1 x P92201D5 - P91193D1/P92201D5-6B Xbarc134-6B locus 205.2 () Automated name-based View Maps
Xbarc24-6B locus 0.7 Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-6B Xbarc24-6B locus 55.3 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-6B Xbarc24-6B locus 54.7 () Automated name-based View Maps
Xbarc48-6B locus -0.91 Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-6B Xbarc48-6B locus 17.6 () Automated name-based View Maps
Xbarc180-6B locus 0.7 No other positions

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.