*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Wheat ABD-Wheat, Physical, SSR
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Chinese_Spring_Deletion_SSR_1A
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
breakpointinterval
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
(Hide Advanced Menu)

Map Details

Map Type: Cytogenetic [ View Map Type Info ]
Map Set Name: Wheat ABD - Wheat, Physical, SSR [ View Map Set Info ]
Map Name: Chinese_Spring_Deletion_SSR_1A
Map Start: -1.00
Map Stop: 1.00
Features by Type:
8 breakpointinterval
28 locus
36 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 36.       of 2 | Next
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_1A
(Click headers to resort)		 Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
Xcfa2153-1A locus -0.93 Wheat ABD - Wheat, Chinese Spring x SQ1 - CS/SQ1-1A Xcfa2153-1A locus 6.80 () Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-1A Xcfa2153-1A locus 1.00 () Automated name-based View Maps
Wheat A - T. boeoticum x monococcum - T.b.xT.m.-1A Xcfa2153-1A locus 55.70 () Automated name-based View Maps
Wheat ABD - Wheat, Courtot x Chinese Spring, GPW - Ta-Courtot/CS-GPW-1A Xcfa2153-1A locus 5.40 () Automated name-based View Maps
Wheat ABD - Wheat, P91193D1 x P92201D5 - P91193D1/P92201D5-1A Xcfa2153-1A locus 22.30 () Automated name-based View Maps
Xbarc148-1A locus -0.24 Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-1A Xbarc148-1A locus 56.80 () Automated name-based View Maps
Wheat AB - Durum wheat, Kofa x UC1113 - Kofa/UC1113-1A Xbarc148-1A locus 47.50 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-1A Xbarc148-1A locus 33.40 () Automated name-based View Maps
Wheat ABD - Wheat, Chinese Spring x SQ1 - CS/SQ1-1A Xbarc148-1A locus 47.80 () Automated name-based View Maps
Xgwm99-1A locus 0.80 Wheat ABD - Wheat, Chinese Spring x SQ1 - CS/SQ1-1A Xgwm99-1A locus 129.50 () Automated name-based View Maps
Wheat AB - T. turgidum, Omrabi5 x dicoccoides, QTL - Tt-Oxd-QTL-1A Xgwm99-1A locus 120.20 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-1A Xgwm99-1A locus 126.00 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-1A Xgwm99-1A locus 111.00 () Automated name-based View Maps
Wheat ABD - Wheat, Conan x Reeder - Conan/Reeder-1A Xgwm99-1A locus 187.31 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-1A Xgwm99-1A locus 153.10 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-1A Xgwm99-1A locus 139.80 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides, SSR - Tturgidum-SSR-1A Xgwm99-1A locus 107.70 () Automated name-based View Maps
Xgwm136-1A locus -0.66 Wheat AB - T. turgidum, Omrabi5 x dicoccoides, QTL - Tt-Oxd-QTL-1A Xgwm136-1A locus 29.40 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-1A Xgwm136-1A locus 11.60 () Automated name-based View Maps
Wheat A - T. boeoticum x monococcum - T.b.xT.m.-1A Xgwm136-1A locus 53.60 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-1A Xgwm136-1A locus 3.90 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-1A Xgwm136-1A locus 5.20 () Automated name-based View Maps
Wheat AB - T. turgidum, JK x Cham1, 2 - Tturgidum-JKxC2-1A Xgwm136-1A locus 173.20 () Automated name-based View Maps
Wheat AB - T. turgidum, JK x Cham1 - Tturgidum-JKxC-1A Xgwm136-1A locus 88.10 () Automated name-based View Maps
Wheat ABD - Wheat, Conan x Reeder - Conan/Reeder-1A Xgwm136-1A locus 13.24 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-1A Xgwm136-1A locus 5.70 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides, SSR - Tturgidum-SSR-1A Xgwm136-1A locus -58.60 () Automated name-based View Maps
Wheat ABD - Wheat, USG3209 x Jaypee - USG3209/Jaypee-1A Xgwm136-1A locus 34.40 () Automated name-based View Maps
Xbarc263-1A locus -0.93 Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-1A Xbarc263-1A locus 17.30 () Automated name-based View Maps
Wheat ABD - Wheat, Conan x Reeder - Conan/Reeder-1A Xbarc263-1A locus 20.99 () Automated name-based View Maps
Xbarc83-1A locus 0.39 Wheat ABD - Wheat, Conan x Reeder - Conan/Reeder-1A Xbarc83-1A locus 82.03 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-1A Xbarc83-1A locus 47.60 () Automated name-based View Maps
Wheat AB - Durum wheat, Kofa x UC1113 - Kofa/UC1113-1A Xbarc83-1A locus 75.20 () Automated name-based View Maps
Xbarc17-1A locus 0.39 Wheat ABD - Wheat, Louise x Penawawa - Louise/Penawawa-1A Xbarc17-1A locus 153.50 () Automated name-based View Maps
Wheat ABD - Wheat, Conan x Reeder - Conan/Reeder-1A Xbarc17-1A locus 140.00 () Automated name-based View Maps
Wheat ABD - Wheat, Grandin x BR34 - Ta-Grandin/BR34-1A Xbarc17-1A locus 155.90 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-1A Xbarc17-1A locus 114.80 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-1A Xbarc17-1A locus 126.40 () Automated name-based View Maps
Xbarc1022-1A locus 0.39 Wheat ABD - Wheat, Conan x Reeder - Conan/Reeder-1A Xbarc1022-1A locus 198.70 () Automated name-based View Maps
Wheat ABD - Wheat, Grandin x BR34 - Ta-Grandin/BR34-1A Xbarc1022-1A locus 126.30 () Automated name-based View Maps
Xcfa2135-1A locus 0.50 Wheat ABD - Wheat, Courtot x Chinese Spring, GPW - Ta-Courtot/CS-GPW-1A Xcfa2135-1A locus 53.10 () Automated name-based View Maps
Xcfa2219-1A locus 0.50 Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-1A Xcfa2219-1A locus 124.10 () Automated name-based View Maps
Wheat ABD - Wheat, Courtot x Chinese Spring, GPW - Ta-Courtot/CS-GPW-1A Xcfa2219-1A locus 153.80 () Automated name-based View Maps
Wheat AB - Durum wheat, Kofa x UC1113 - Kofa/UC1113-1A Xcfa2219-1A locus 118.00 () Automated name-based View Maps
Xgwm33-1A locus -0.93 Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-1A Xgwm33-1A locus 16.90 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-1A Xgwm33-1A locus 16.60 () Automated name-based View Maps
Wheat AB - T. turgidum, JK x Cham1, 2 - Tturgidum-JKxC2-1A Xgwm33-1A locus 31.50 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-1A Xgwm33-1A locus 16.30 () Automated name-based View Maps
Wheat AB - T. turgidum, JK x Cham1 - Tturgidum-JKxC-1A Xgwm33-1A locus 15.30 () Automated name-based View Maps
Wheat A - T. boeoticum x monococcum - T.b.xT.m.-1A Xgwm33-1A locus 47.90 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-1A Xgwm33-1A locus 27.40 () Automated name-based View Maps
Xgpw2032-1A locus -0.66 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-1A Xgpw2032-1A locus 24.60 () Automated name-based View Maps
Xgpw2277-1A locus -0.66 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-1A Xgpw2277-1A locus 42.60 () Automated name-based View Maps
Xgwm164-1A locus 0.08 Wheat AB - T. turgidum, Messapia x dicoccoides, SSR - Tturgidum-SSR-1A Xgwm164-1A locus -4.90 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-1A Xgwm164-1A locus 56.30 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-1A Xgwm164-1A locus 40.50 () Automated name-based View Maps
Wheat ABD - Wheat, Louise x Penawawa - Louise/Penawawa-1A Xgwm164-1A locus 63.70 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-1A Xgwm164-1A locus 46.40 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-1A Xgwm164-1A locus 42.90 () Automated name-based View Maps
Xgpw2069-1A locus 0.50 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-1A Xgpw2069-1A locus 50.30 () Automated name-based View Maps
Xgpw2006-1A locus 0.50 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-1A Xgpw2006-1A locus 52.90 () Automated name-based View Maps
Xgwm357-1A locus 0.39 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-1A Xgwm357-1A locus 53.30 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-1A Xgwm357-1A locus 51.60 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides, SSR - Tturgidum-SSR-1A Xgwm357-1A locus 7.30 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-1A Xgwm357-1A locus 54.00 () Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-1A Xgwm357-1A locus 54.60 () Automated name-based View Maps
Wheat ABD - Wheat, USG3209 x Jaypee - USG3209/Jaypee-1A Xgwm357-1A locus 86.00 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-1A Xgwm357-1A locus 48.20 () Automated name-based View Maps
Xgwm135-1A locus 0.39 Wheat A - T. boeoticum x monococcum - T.b.xT.m.-1A Xgwm135-1A locus 135.90 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-1A Xgwm135-1A locus 55.20 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-1A Xgwm135-1A locus 57.45 () Automated name-based View Maps
Wheat AB - Durum wheat, Kofa x UC1113 - Kofa/UC1113-1A Xgwm135-1A locus 76.40 () Automated name-based View Maps
Wheat A - Wheat, 2012, Brittle culm - Wheat_Brittle_culm_2012-1A Xgwm135-1A locus 10.30 (cM) Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-1A Xgwm135-1A locus 56.20 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-1A Xgwm135-1A locus 60.70 () Automated name-based View Maps
Xgwm497-1A locus 0.08 Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-1A Xgwm497-1A locus 81.20 () Automated name-based View Maps
Wheat AB - T. turgidum, Omrabi5 x dicoccoides, QTL - Tt-Oxd-QTL-1A Xgwm497-1A locus 113.80 () Automated name-based View Maps
Wheat AB - Durum wheat, Kofa x UC1113 - Kofa/UC1113-1A Xgwm497-1A locus 118.00 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-1A Xgwm497-1A locus 86.80 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-1A Xgwm497-1A locus 85.50 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-1A Xgwm497-1A locus 108.90 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides, SSR - Tturgidum-SSR-1A Xgwm497-1A locus 78.30 () Automated name-based View Maps
Xgwm666-1A locus 0.08 Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-1A Xgwm666-1A locus 109.00 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-1A Xgwm666-1A locus 92.30 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-1A Xgwm666-1A locus 96.00 () Automated name-based View Maps
Xbarc28-1A locus -0.24 Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-1A Xbarc28-1A locus 58.20 () Automated name-based View Maps
Wheat ABD - Wheat, USG3209 x Jaypee - USG3209/Jaypee-1A Xbarc28-1A locus 84.00 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-1A Xbarc28-1A locus 46.60 () Automated name-based View Maps
Xbarc158-1A locus 0.39 Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-1A Xbarc158-1A locus 129.30 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-1A Xbarc158-1A locus 113.80 () Automated name-based View Maps
Xgpw7068-1A locus 0.80 No other positions
Xbarc25-1A locus -0.24 No other positions
Xbarc48-1A locus 0.08 No other positions

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.