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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Wheat ABD-Wheat, Physical, SSR
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Chinese_Spring_Deletion_SSR_1D
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
breakpointinterval
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: Cytogenetic [ View Map Type Info ]
Map Set Name: Wheat ABD - Wheat, Physical, SSR [ View Map Set Info ]
Map Name: Chinese_Spring_Deletion_SSR_1D
Map Start: -1
Map Stop: 1
Features by Type:
8 breakpointinterval
21 locus
29 Total

Map Features

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Items 26 to 29 of 29.       Previous | of 2
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_1D
(Click headers to resort)		 Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
C-1DL4-0.18 breakpointinterval 0 - 0.18 Wheat ABD - Wheat deletion-line bins - CS-deletions-1D C-1DL4-0.18 breakpointinterval 0 - 0.18 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, EST - Chinese_Spring_Deletion_1D C-1DL4-0.18 breakpointinterval 0 - 0.18 () Automated name-based View Maps
1DL4-0.18-0.41 breakpointinterval 0.18 - 0.41 Wheat ABD - Wheat deletion-line bins - CS-deletions-1D 1DL4-0.18-0.41 breakpointinterval 0.18 - 0.41 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, EST - Chinese_Spring_Deletion_1D 1DL4-0.18-0.41 breakpointinterval 0.18 - 0.41 () Automated name-based View Maps
1DL2-0.41-1.00 breakpointinterval 0.41 - 1 Wheat ABD - Wheat, Physical, EST - Chinese_Spring_Deletion_1D 1DL2-0.41-1.00 breakpointinterval 0.41 - 1 () Automated name-based View Maps
Wheat ABD - Wheat deletion-line bins - CS-deletions-1D 1DL2-0.41-1.00 breakpointinterval 0.41 - 1 () Automated name-based View Maps
C1D breakpointinterval 0 Wheat ABD - Wheat, Physical, EST - Chinese_Spring_Deletion_1D C1D breakpointinterval 0 () Automated name-based View Maps

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