*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Wheat ABD-Wheat, Physical, SSR
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Chinese_Spring_Deletion_SSR_6A
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
breakpointinterval
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Cytogenetic [ View Map Type Info ]
Map Set Name: Wheat ABD - Wheat, Physical, SSR [ View Map Set Info ]
Map Name: Chinese_Spring_Deletion_SSR_6A
Map Start: -1
Map Stop: 1
Features by Type:
9 breakpointinterval
27 locus
36 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 36.       of 2 | Next
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_6A
(Click headers to resort)
Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
Xgwm334-6A locus -0.68 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-6A Xgwm334-6A locus 8.4 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-6A Xgwm334-6A locus 6.8 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-6A Xgwm334-6A locus 8.95 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-6A Xgwm334-6A locus 1.8 () Automated name-based View Maps
Wheat ABD - Wheat, Chinese Spring x SQ1 - CS/SQ1-6A Xgwm334-6A locus 14.8 () Automated name-based View Maps
Xbarc3-6A locus -0.68 Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-6A Xbarc3-6A locus 43.9 () Automated name-based View Maps
Wheat ABD - Wheat, Louise x Penawawa - Louise/Penawawa-6A Xbarc3-6A locus 91.7 () Automated name-based View Maps
Wheat ABD - Wheat, Chinese Spring x SQ1 - CS/SQ1-6A Xbarc3-6A locus 119.4 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-6A Xbarc3-6A locus 47.4 () Automated name-based View Maps
Xbarc171-6A locus 0.95 Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-6A Xbarc171-6A locus 58 () Automated name-based View Maps
Wheat ABD - Wheat, Chinese Spring x SQ1 - CS/SQ1-6A Xbarc171-6A locus 121.6 () Automated name-based View Maps
Xwmc256-6A locus 0.72 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-6A Xwmc256-6A locus 89.9 () Automated name-based View Maps
Wheat ABD - Wheat, Louise x Penawawa - Louise/Penawawa-6A Xwmc256-6A locus 77.9 () Automated name-based View Maps
Wheat ABD - Wheat, Chinese Spring x SQ1 - CS/SQ1-6A Xwmc256-6A locus 131.9 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-6A Xwmc256-6A locus 40.4 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR 2 - Ta-Synthetic/Opata-SSR2-6A Xwmc256-6A locus 87.4 () Automated name-based View Maps
Wheat AB - Durum wheat, Kofa x UC1113 - Kofa/UC1113-6A Xwmc256-6A locus 57.4 () Automated name-based View Maps
Xbarc1055-6A locus 0.45 Wheat ABD - Wheat, Xiaoyan 54 x Jing 411_6A - Wheat, Xiaoyan 54 x Jing 411_6A Xbarc1055-6A locus 4.4 () Automated name-based View Maps
Wheat ABD - Wheat, Conan x Reeder - Conan/Reeder-6A Xbarc1055-6A locus 58.25 () Automated name-based View Maps
Xcfd82-6A locus -0.5 Wheat ABD - Wheat, Xiaoyan 54 x Jing 411_6A - Wheat, Xiaoyan 54 x Jing 411_6A Xcfd82-6A locus 26.1 () Automated name-based View Maps
Wheat ABD - Wheat, Courtot x Chinese Spring, GPW - Ta-Courtot/CS-GPW-6A Xcfd82-6A locus 117.2 () Automated name-based View Maps
Wheat ABD - Wheat, P91193D1 x P92201D5 - P91193D1/P92201D5-6A Xcfd82-6A locus 0 () Automated name-based View Maps
Xgwm169-6A locus 0.95 Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-6A Xgwm169-6A locus 82.6 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-6A Xgwm169-6A locus 123.3 () Automated name-based View Maps
Wheat ABD - Wheat, Louise x Penawawa - Louise/Penawawa-6A Xgwm169-6A locus 47.4 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-6A Xgwm169-6A locus 99 () Automated name-based View Maps
Wheat AB - Durum wheat, Kofa x UC1113 - Kofa/UC1113-6A Xgwm169-6A locus 92.6 () Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-6A Xgwm169-6A locus 156.5 () Automated name-based View Maps
Wheat ABD - Wheat, Courtot x Chinese Spring, GPW - Ta-Courtot/CS-GPW-6A Xgwm169-6A locus 147.4 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-6A Xgwm169-6A locus 116.5 () Automated name-based View Maps
Xgwm427-6A locus 0.95 Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-6A Xgwm427-6A locus 122.65 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-6A Xgwm427-6A locus 131.2 () Automated name-based View Maps
Wheat ABD - Wheat, Courtot x Chinese Spring, GPW - Ta-Courtot/CS-GPW-6A Xgwm427-6A locus 171.8 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-6A Xgwm427-6A locus 93.2 () Automated name-based View Maps
Wheat A - T. boeoticum x monococcum - T.b.xT.m.-6A Xgwm427-6A locus 60.1 () Automated name-based View Maps
Wheat AB - T. turgidum, JK x Cham1 - Tturgidum-JKxC-6A Xgwm427-6A locus 373.5 () Automated name-based View Maps
Wheat AB - T. turgidum, JK x Cham1, 2 - Tturgidum-JKxC2-6A Xgwm427-6A locus 294.7 () Automated name-based View Maps
Wheat ABD - Wheat, P91193D1 x P92201D5 - P91193D1/P92201D5-6A Xgwm427-6A locus 66 () Automated name-based View Maps
Wheat AB - Durum wheat, Kofa x UC1113 - Kofa/UC1113-6A Xgwm427-6A locus 101.7 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-6A Xgwm427-6A locus 107.2 () Automated name-based View Maps
Xgpw2295-6A locus -0.68 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-6A Xgpw2295-6A locus 5 () Automated name-based View Maps
Xgwm459-6A locus -0.68 Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-6A Xgwm459-6A locus 0 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-6A Xgwm459-6A locus 5 () Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-6A Xgwm459-6A locus 9.6 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-6A Xgwm459-6A locus 5.7 () Automated name-based View Maps
Wheat ABD - Wheat_Yr81_2019 - Wheat_Yr81_2019-6A Xgwm459-6A locus 12.5 (cM) Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-6A Xgwm459-6A locus 8.75 () Automated name-based View Maps
Xgpw3087-6A locus -0.82 Wheat ABD - Wheat_Consensus_2014_Ug99_Rust - Wheat_Consensus_2014_Ug99_Rust_6 gpw3087 locus 87.69 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-6A Xgpw3087-6A locus 18 () Automated name-based View Maps
Xgpw2082-6A locus -0.18 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-6A Xgpw2082-6A locus 28 () Automated name-based View Maps
Xgwm494-6A locus -0.18 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-6A Xgwm494-6A locus 66.8 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-6A Xgwm494-6A locus 66.9 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-6A Xgwm494-6A locus 50.8 () Automated name-based View Maps
Xcfd190-6A locus -0.18 Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-6A Xcfd190-6A locus 37.1 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-6A Xcfd190-6A locus 69.2 () Automated name-based View Maps
Wheat A - T. boeoticum x monococcum - T.b.xT.m.-6A Xcfd190-6A locus 0 () Automated name-based View Maps
Xgpw1150-6A locus -0.18 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-6A Xgpw1150-6A locus 72.2 () Automated name-based View Maps
Xgpw3029-6A locus 0.72 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-6A Xgpw3029-6A locus 74.9 () Automated name-based View Maps
Xgpw8068-6A locus 0.72 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-6A Xgpw8068-6A locus 75.6 () Automated name-based View Maps
Xgpw2060-6A locus 0.95 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-6A Xgpw2060-6A locus 86.6 () Automated name-based View Maps
Xgwm570-6A locus 0.95 Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-6A Xgwm570-6A locus 82.2 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-6A Xgwm570-6A locus 102.3 () Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-6A Xgwm570-6A locus 140.5 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-6A Xgwm570-6A locus 50.5 () Automated name-based View Maps
Wheat ABD - Wheat, Xiaoyan 54 x Jing 411_6A - Wheat, Xiaoyan 54 x Jing 411_6A Xgwm570-6A locus 29.9 () Automated name-based View Maps
Wheat A - T. boeoticum x monococcum - T.b.xT.m.-6A Xgwm570-6A locus 26.7 () Automated name-based View Maps
Wheat AB - T. turgidum, Omrabi5 x dicoccoides, QTL - Tt-Oxd-QTL-6A Xgwm570-6A locus 108.7 () Automated name-based View Maps
Wheat AB - Durum wheat, Kofa x UC1113 - Kofa/UC1113-6A Xgwm570-6A locus 68.8 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides, SSR - Tturgidum-SSR-6A Xgwm570-6A locus 26.9 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-6A Xgwm570-6A locus 98.1 () Automated name-based View Maps
Wheat ABD - Wheat, P91193D1 x P92201D5 - P91193D1/P92201D5-6A Xgwm570-6A locus 37.3 () Automated name-based View Maps
Xgwm617-6A locus 0.95 Wheat ABD - Wheat, P91193D1 x P92201D5 - P91193D1/P92201D5-6A Xgwm617-6A locus 70.5 () Automated name-based View Maps
Wheat A - T. boeoticum x monococcum - T.b.xT.m.-6A Xgwm617-6A locus 57.1 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-6A Xgwm617-6A locus 95.3 () Automated name-based View Maps
Wheat AB - Durum wheat, Kofa x UC1113 - Kofa/UC1113-6A Xgwm617-6A locus 101.7 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-6A Xgwm617-6A locus 129.9 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-6A Xgwm617-6A locus 110.1 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-6A Xgwm617-6A locus 118.95 () Automated name-based View Maps
Xgpw2344-6A locus 0.95 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-6A Xgpw2344-6A locus 130 () Automated name-based View Maps
Xbarc107-6A locus 0.45 Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-6A Xbarc107-6A locus 67.3 () Automated name-based View Maps
Wheat ABD - Wheat, Grandin x BR34 - Ta-Grandin/BR34-6A Xbarc107-6A locus 70.8 () Automated name-based View Maps
Wheat AB - Durum wheat, Kofa x UC1113 - Kofa/UC1113-6A Xbarc107-6A locus 47.4 () Automated name-based View Maps
Wheat ABD - Wheat, Xiaoyan 54 x Jing 411_6A - Wheat, Xiaoyan 54 x Jing 411_6A Xbarc107-6A locus 16.4 () Automated name-based View Maps
Xbarc113-6A locus 0.45 Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-6A Xbarc113-6A locus 66.1 () Automated name-based View Maps
Wheat AB - Durum wheat, Kofa x UC1113 - Kofa/UC1113-6A Xbarc113-6A locus 57.4 () Automated name-based View Maps
Wheat A - Wheat, 2012, Brittle culm - Wheat_Brittle_culm_2012-6A Xbarc113-6A locus 12.8 (cM) Automated name-based View Maps
Wheat ABD - Wheat, Grandin x BR34 - Ta-Grandin/BR34-6A Xbarc113-6A locus 81.2 () Automated name-based View Maps
Wheat A - T. boeoticum x monococcum - T.b.xT.m.-6A Xbarc113-6A locus 13 () Automated name-based View Maps
Wheat ABD - Wheat, P91193D1 x P92201D5 - P91193D1/P92201D5-6A Xbarc113-6A locus 14.6 () Automated name-based View Maps
Xbarc118-6A locus 0.45 Wheat AB - Durum wheat, Kofa x UC1113 - Kofa/UC1113-6A Xbarc118-6A locus 43.7 () Automated name-based View Maps
Xbarc204-6A locus 0.95 Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-6A Xbarc204-6A locus 74.4 () Automated name-based View Maps
Wheat AB - Durum wheat, Kofa x UC1113 - Kofa/UC1113-6A Xbarc204-6A locus 67.1 () Automated name-based View Maps

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.