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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
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Map Set Wheat ABD-Wheat, Physical, SSR
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Map Details

Map Type: Cytogenetic [ View Map Type Info ]
Map Set Name: Wheat ABD - Wheat, Physical, SSR [ View Map Set Info ]
Map Name: Chinese_Spring_Deletion_SSR_6D
Map Start: -1
Map Stop: 1
Features by Type:
12 breakpointinterval
41 locus
53 Total

Map Features

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Items 1 to 25 of 53.       of 3 | Next
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_6D
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Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
Xcfd49-6D locus -0.99 Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-6D Xcfd49-6D locus 0 () Automated name-based View Maps
Wheat ABD - Wheat, Louise x Penawawa - Louise/Penawawa-6D Xcfd49-6D locus 0 () Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-6D Xcfd49-6D locus 0 () Automated name-based View Maps
Wheat ABD - Wheat, Chinese Spring x SQ1 - CS/SQ1-6D Xcfd49-6D locus 0 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-6D Xcfd49-6D locus 10.3 () Automated name-based View Maps
Xbarc173-6D locus -0.99 Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-6D Xbarc173-6D locus 15.6 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-6D Xbarc173-6D locus 15.3 () Automated name-based View Maps
Wheat ABD - Wheat, Louise x Penawawa - Louise/Penawawa-6D Xbarc173-6D locus 24.3 () Automated name-based View Maps
Wheat ABD - Wheat, Grandin x BR34 - Ta-Grandin/BR34-6D Xbarc173-6D locus 18.3 () Automated name-based View Maps
Wheat ABD - Wheat, Chinese Spring x SQ1 - CS/SQ1-6D Xbarc173-6D locus 25.3 () Automated name-based View Maps
Xgwm469-6D locus -0.99 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-6D Xgwm469-6D locus 21.1 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-6D Xgwm469-6D locus 20.6 () Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-6D Xgwm469-6D locus 35.5 () Automated name-based View Maps
Wheat ABD - Wheat, Grandin x BR34 - Ta-Grandin/BR34-6D Xgwm469-6D locus 27.1 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-6D Xgwm469-6D locus 25.2 () Automated name-based View Maps
Wheat ABD - Wheat, Chinese Spring x SQ1 - CS/SQ1-6D Xgwm469-6D locus 33.4 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-6D Xgwm469-6D locus 13.8 () Automated name-based View Maps
Wheat ABD - Wheat, Louise x Penawawa - Louise/Penawawa-6D Xgwm469-6D locus 31.6 () Automated name-based View Maps
Xcfd76-6D locus 0.38 Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-6D Xcfd76-6D locus 61.2 () Automated name-based View Maps
Wheat ABD - Wheat, P91193D1 x P92201D5 - P91193D1/P92201D5-6D Xcfd76-6D locus 62.2 () Automated name-based View Maps
Wheat ABD - Wheat, Courtot x Chinese Spring, GPW - Ta-Courtot/CS-GPW-6D Xcfd76-6D locus 45.3 () Automated name-based View Maps
Wheat ABD - Wheat, Chinese Spring x SQ1 - CS/SQ1-6D Xcfd76-6D locus 104.4 () Automated name-based View Maps
Wheat ABD - Wheat, Louise x Penawawa - Louise/Penawawa-6D Xcfd76-6D locus 118.5 () Automated name-based View Maps
Xbarc175-6D locus 0.14 Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-6D Xbarc175-6D locus 74.4 () Automated name-based View Maps
Wheat ABD - Wheat, Chinese Spring x SQ1 - CS/SQ1-6D Xbarc175-6D locus 122.5 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-6D Xbarc175-6D locus 79.1 () Automated name-based View Maps
Wheat ABD - Wheat, Louise x Penawawa - Louise/Penawawa-6D Xbarc175-6D locus 138.9 () Automated name-based View Maps
Xbarc21-6D locus 0.64 Wheat ABD - Wheat, Chinese Spring x SQ1 - CS/SQ1-6D Xbarc21-6D locus 214.7 () Automated name-based View Maps
Wheat ABD - Wheat, Conan x Reeder - Conan/Reeder-6D Xbarc21-6D locus 74 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-6D Xbarc21-6D locus 111.3 () Automated name-based View Maps
Xbarc196-6D locus -0.62 Wheat ABD - Wheat, Grandin x BR34 - Ta-Grandin/BR34-6D Xbarc196-6D locus 96.4 () Automated name-based View Maps
Wheat ABD - Wheat, Louise x Penawawa - Louise/Penawawa-6D Xbarc196-6D locus 90.8 () Automated name-based View Maps
Wheat ABD - Wheat, Conan x Reeder - Conan/Reeder-6D Xbarc196-6D locus 13.42 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-6D Xbarc196-6D locus 51.4 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-6D Xbarc196-6D locus 49.8 () Automated name-based View Maps
Xcfd188-6D locus 0.38 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-6D Xcfd188-6D locus 86.3 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-6D Xcfd188-6D locus 59.5 () Automated name-based View Maps
Wheat ABD - Wheat, Louise x Penawawa - Louise/Penawawa-6D Xcfd188-6D locus 107 () Automated name-based View Maps
Wheat ABD - Wheat, Conan x Reeder - Conan/Reeder-6D Xcfd188-6D locus 23.87 () Automated name-based View Maps
Wheat ABD - Wheat, USG3209 x Jaypee - USG3209/Jaypee-6D Xcfd188-6D locus 1.1 () Automated name-based View Maps
Xgdm141-6D locus -0.99 Wheat ABD - Wheat, Synthetic x Opata, SSR-D - Ta-Synthetic/Opata-SSR_D-6D Xgdm141-6D locus 20 () Automated name-based View Maps
Xgdm108-6D locus -0.22 Wheat ABD - Wheat, Synthetic x Opata, SSR-D - Ta-Synthetic/Opata-SSR_D-6D Xgdm108-6D locus 50.4 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-6D Xgdm108-6D locus 62.8 () Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-6D Xgdm108-6D locus 84.7 () Automated name-based View Maps
Xgdm127-6D locus -0.62 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-6D Xgdm127-6D locus 61.9 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR-D - Ta-Synthetic/Opata-SSR_D-6D Xgdm127-6D locus 52.9 () Automated name-based View Maps
Xcfd33-6D locus -0.89 Wheat ABD - Wheat, Courtot x Chinese Spring, GPW - Ta-Courtot/CS-GPW-6D Xcfd33-6D locus 0 () Automated name-based View Maps
Wheat ABD - Wheat, P91193D1 x P92201D5 - P91193D1/P92201D5-6D Xcfd33-6D locus 0 () Automated name-based View Maps
Wheat ABD - Wheat, Louise x Penawawa - Louise/Penawawa-6D Xcfd33-6D locus 86.3 () Automated name-based View Maps
Xcfd19-6D locus -0.22 Wheat ABD - Wheat, Courtot x Chinese Spring, GPW - Ta-Courtot/CS-GPW-6D Xcfd19-6D locus 16 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-6D Xcfd19-6D locus 71 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-6D Xcfd19-6D locus 49.7 () Automated name-based View Maps
Xcfd37-6D locus 0.14 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-6D Xcfd37-6D locus 86.9 () Automated name-based View Maps
Wheat ABD - Wheat, Courtot x Chinese Spring, GPW - Ta-Courtot/CS-GPW-6D Xcfd37-6D locus 26.3 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-6D Xcfd37-6D locus 59.5 () Automated name-based View Maps
Xgwm55-6D locus 0.14 Wheat ABD - Wheat, P91193D1 x P92201D5 - P91193D1/P92201D5-6D Xgwm55-6D locus 33.9 () Automated name-based View Maps
Wheat ABD - Wheat, Courtot x Chinese Spring, GPW - Ta-Courtot/CS-GPW-6D Xgwm55-6D locus 27.4 () Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-6D Xgwm55-6D locus 109.8 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-6D Xgwm55-6D locus 60.1 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-6D Xgwm55-6D locus 87.4 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-6D Xgwm55-6D locus 57 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-6D Xgwm55-6D locus 73.05 () Automated name-based View Maps
Wheat ABD - Wheat, Louise x Penawawa - Louise/Penawawa-6D Xgwm55-6D locus 108.4 () Automated name-based View Maps
Xcfd47-6D locus 0.38 Wheat ABD - Wheat, Courtot x Chinese Spring, GPW - Ta-Courtot/CS-GPW-6D Xcfd47-6D locus 50.8 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-6D Xcfd47-6D locus 95.2 () Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-6D Xcfd47-6D locus 120 () Automated name-based View Maps
Xcfd38-6D locus 0.64 Wheat ABD - Wheat, Courtot x Chinese Spring, GPW - Ta-Courtot/CS-GPW-6D Xcfd38-6D locus 102.1 () Automated name-based View Maps
Xcfd5-6D locus 0.9 Wheat ABD - Wheat, Courtot x Chinese Spring, GPW - Ta-Courtot/CS-GPW-6D Xcfd5-6D locus 126.2 () Automated name-based View Maps
Xcfd45-6D locus 0.9 Wheat ABD - Wheat, Courtot x Chinese Spring, GPW - Ta-Courtot/CS-GPW-6D Xcfd45-6D locus 128.7 () Automated name-based View Maps
Wheat ABD - Wheat, P91193D1 x P92201D5 - P91193D1/P92201D5-6D Xcfd45-6D locus 154.5 () Automated name-based View Maps
Xcfd60-6D locus 0.9 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-6D Xcfd60-6D locus 174.5 () Automated name-based View Maps
Wheat ABD - Wheat, Courtot x Chinese Spring, GPW - Ta-Courtot/CS-GPW-6D Xcfd60-6D locus 133.1 () Automated name-based View Maps
Xgpw1034-6D locus -0.99 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-6D Xgpw1034-6D locus 22.4 () Automated name-based View Maps
Xcfd13-6D locus -0.99 Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-6D Xcfd13-6D locus 41.8 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-6D Xcfd13-6D locus 23.9 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-6D Xcfd13-6D locus 21.3 () Automated name-based View Maps
Xgpw1019-6D locus -0.62 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-6D Xgpw1019-6D locus 80.5 () Automated name-based View Maps
Xgpw1101-6D locus -0.22 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-6D Xgpw1101-6D locus 86.9 () Automated name-based View Maps
Xcfd287-6D locus 0.38 Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-6D Xcfd287-6D locus 67.9 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-6D Xcfd287-6D locus 91.6 () Automated name-based View Maps

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