*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Wheat ABD-Wheat, Physical, SSR
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Chinese_Spring_Deletion_SSR_7D
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
breakpointinterval
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Cytogenetic [ View Map Type Info ]
Map Set Name: Wheat ABD - Wheat, Physical, SSR [ View Map Set Info ]
Map Name: Chinese_Spring_Deletion_SSR_7D
Map Start: -1
Map Stop: 1
Features by Type:
9 breakpointinterval
35 locus
44 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 44.       of 2 | Next
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_7D
(Click headers to resort)
Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
Xcfd31-7D locus -0.18 Wheat ABD - Wheat, Chinese Spring x SQ1 - CS/SQ1-7D Xcfd31-7D locus 36.1 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-7D Xcfd31-7D locus 51.7 () Automated name-based View Maps
Wheat ABD - Wheat, Louise x Penawawa - Louise/Penawawa-7D Xcfd31-7D locus 36.4 () Automated name-based View Maps
Wheat ABD - Wheat, Courtot x Chinese Spring, GPW - Ta-Courtot/CS-GPW-7D Xcfd31-7D locus 48.6 () Automated name-based View Maps
Xbarc154-7D locus -0.81 Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-7D Xbarc154-7D locus 21.1 () Automated name-based View Maps
Wheat ABD - Wheat, Chinese Spring x SQ1 - CS/SQ1-7D Xbarc154-7D locus 84.2 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-7D Xbarc154-7D locus 62.4 () Automated name-based View Maps
Xcfd14-7D locus -0.18 Wheat ABD - Wheat, Courtot x Chinese Spring, GPW - Ta-Courtot/CS-GPW-7D Xcfd14-7D locus 157.1 () Automated name-based View Maps
Wheat ABD - Wheat, Chinese Spring x SQ1 - CS/SQ1-7D Xcfd14-7D locus 142.3 () Automated name-based View Maps
Wheat ABD - Wheat, Louise x Penawawa - Louise/Penawawa-7D Xcfd14-7D locus 122.8 () Automated name-based View Maps
Wheat ABD - Wheat, P91193D1 x P92201D5 - P91193D1/P92201D5-7D Xcfd14-7D locus 59.5 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-7D Xcfd14-7D locus 92.7 () Automated name-based View Maps
Xgwm437-7D locus 0.15 Wheat ABD - Wheat, P91193D1 x P92201D5 - P91193D1/P92201D5-7D Xgwm437-7D locus 71.3 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-7D Xgwm437-7D locus 91.5 () Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-7D Xgwm437-7D locus 135.4 () Automated name-based View Maps
Wheat ABD - Wheat, Courtot x Chinese Spring, GPW - Ta-Courtot/CS-GPW-7D Xgwm437-7D locus 164.3 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-7D Xgwm437-7D locus 154.9 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-7D Xgwm437-7D locus 67.1 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-7D Xgwm437-7D locus 144.1 () Automated name-based View Maps
Wheat ABD - Wheat, Louise x Penawawa - Louise/Penawawa-7D Xgwm437-7D locus 131.6 () Automated name-based View Maps
Wheat ABD - Wheat, Chinese Spring x SQ1 - CS/SQ1-7D Xgwm437-7D locus 143.4 () Automated name-based View Maps
Xgwm37-7D locus 0.91 Wheat ABD - Wheat, Chinese Spring x SQ1 - CS/SQ1-7D Xgwm37-7D locus 235.5 () Automated name-based View Maps
Wheat ABD - Wheat, Courtot x Chinese Spring, GPW - Ta-Courtot/CS-GPW-7D Xgwm37-7D locus 263 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-7D Xgwm37-7D locus 140.9 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-7D Xgwm37-7D locus 141.7 () Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-7D Xgwm37-7D locus 236.4 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-7D Xgwm37-7D locus 255.3 () Automated name-based View Maps
Xgwm44-7D locus -0.81 Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-7D Xgwm44-7D locus 108.1 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-7D Xgwm44-7D locus 126.8 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-7D Xgwm44-7D locus 43.9 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-7D Xgwm44-7D locus 78.4 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR 2 - Ta-Synthetic/Opata-SSR2-7D Xgwm44-7D locus 139.7 () Automated name-based View Maps
Wheat ABD - Wheat, Louise x Penawawa - Louise/Penawawa-7D Xgwm44-7D locus 89.8 () Automated name-based View Maps
Wheat ABD - Wheat, Conan x Reeder - Conan/Reeder-7D Xgwm44-7D locus 78 () Automated name-based View Maps
Wheat ABD - Wheat, Forno x Oberkulmer - Triticum-FxO-7D Xgwm44-7D locus 64 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-7D Xgwm44-7D locus 114.6 () Automated name-based View Maps
Wheat ABD - Wheat, 2002, coleoptile color - Wheat-2002-ColeoptileColor-7D Xgwm44-7D locus 45.2 (cM) Automated name-based View Maps
Xbarc126-7D locus -0.81 Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-7D Xbarc126-7D locus 74.9 () Automated name-based View Maps
Wheat ABD - Wheat, Grandin x BR34 - Ta-Grandin/BR34-7D Xbarc126-7D locus 111.7 () Automated name-based View Maps
Wheat ABD - Wheat, Conan x Reeder - Conan/Reeder-7D Xbarc126-7D locus 92.13 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-7D Xbarc126-7D locus 37.5 () Automated name-based View Maps
Xgwm111-7D.1 locus -0.48 Wheat ABD - Wheat, Courtot x Chinese Spring, GPW - Ta-Courtot/CS-GPW-7D Xgwm111-7D.1 locus 21 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-7D Xgwm111-7D.1 locus 133.9 () Automated name-based View Maps
Xcfd41-7D locus -0.18 Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-7D Xcfd41-7D locus 44 () Automated name-based View Maps
Wheat ABD - Wheat, Courtot x Chinese Spring, GPW - Ta-Courtot/CS-GPW-7D Xcfd41-7D locus 35.3 () Automated name-based View Maps
Wheat ABD - Wheat, Louise x Penawawa - Louise/Penawawa-7D Xcfd41-7D locus 26.8 () Automated name-based View Maps
Xcfd66-7D locus -0.18 Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-7D Xcfd66-7D locus 34.1 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-7D Xcfd66-7D locus 53.1 () Automated name-based View Maps
Wheat ABD - Wheat, Courtot x Chinese Spring, GPW - Ta-Courtot/CS-GPW-7D Xcfd66-7D locus 43.3 () Automated name-based View Maps
Xcfd21-7D locus -0.18 Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-7D Xcfd21-7D locus 79.8 () Automated name-based View Maps
Wheat ABD - Wheat, Louise x Penawawa - Louise/Penawawa-7D Xcfd21-7D locus 79.7 () Automated name-based View Maps
Wheat ABD - Wheat, Courtot x Chinese Spring, GPW - Ta-Courtot/CS-GPW-7D Xcfd21-7D locus 102.3 () Automated name-based View Maps
Xcfd46-7D locus -0.18 Wheat ABD - Wheat, Courtot x Chinese Spring, GPW - Ta-Courtot/CS-GPW-7D Xcfd46-7D locus 124.5 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-7D Xcfd46-7D locus 84.9 () Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-7D Xcfd46-7D locus 120.9 () Automated name-based View Maps
Xgwm111-7D.2 locus -0.48 Wheat ABD - Wheat, Courtot x Chinese Spring, GPW - Ta-Courtot/CS-GPW-7D Xgwm111-7D.2 locus 140.5 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-7D Xgwm111-7D.2 locus 138.3 () Automated name-based View Maps
Xgwm428-7D locus 0.46 Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-7D Xgwm428-7D locus 119.2 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-7D Xgwm428-7D locus 218.9 () Automated name-based View Maps
Wheat ABD - Wheat, Courtot x Chinese Spring, GPW - Ta-Courtot/CS-GPW-7D Xgwm428-7D locus 249.2 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-7D Xgwm428-7D locus 135.9 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-7D Xgwm428-7D locus 222.7 () Automated name-based View Maps
Xcfa2040-7D locus 0.91 Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-7D Xcfa2040-7D locus 144 () Automated name-based View Maps
Wheat ABD - Wheat, Courtot x Chinese Spring, GPW - Ta-Courtot/CS-GPW-7D Xcfa2040-7D locus 256.2 () Automated name-based View Maps
Xcfd69-7D locus 0.91 Wheat ABD - Wheat, Courtot x Chinese Spring, GPW - Ta-Courtot/CS-GPW-7D Xcfd69-7D locus 269.4 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-7D Xcfd69-7D locus 144.8 () Automated name-based View Maps
Xgwm295-7D locus -0.81 Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-7D Xgwm295-7D locus 90.9 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-7D Xgwm295-7D locus 76.5 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-7D Xgwm295-7D locus 67.1 () Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-7D Xgwm295-7D locus 62.1 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-7D Xgwm295-7D locus 14.6 () Automated name-based View Maps
Xgpw1142-7D locus -0.81 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-7D Xgpw1142-7D locus 72.2 () Automated name-based View Maps
Xcfa2174-7D locus 0.15 Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-7D Xcfa2174-7D locus 116.8 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-7D Xcfa2174-7D locus 125 () Automated name-based View Maps
Xgpw2160-7D locus -0.5 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-7D Xgpw2160-7D locus 145.7 () Automated name-based View Maps
Xgpw8188-7D locus -0.5 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-7D Xgpw8188-7D locus 145.9 () Automated name-based View Maps
Xgpw5054-7D locus -0.5 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-7D Xgpw5054-7D locus 146.1 () Automated name-based View Maps
Xgpw5181-7D locus -0.5 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-7D Xgpw5181-7D locus 146.1 () Automated name-based View Maps
Xgpw4129-7D locus 0.46 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-7D Xgpw4129-7D locus 170.3 () Automated name-based View Maps
Xgpw334-7D locus 0.46 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-7D Xgpw334-7D locus 180.8 () Automated name-based View Maps

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.