*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Wheat ABD-Wheat, Physical, SSR
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Chinese_Spring_Deletion_SSR_7D
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
breakpointinterval
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Cytogenetic [ View Map Type Info ]
Map Set Name: Wheat ABD - Wheat, Physical, SSR [ View Map Set Info ]
Map Name: Chinese_Spring_Deletion_SSR_7D
Map Start: -1
Map Stop: 1
Features by Type:
9 breakpointinterval
35 locus
44 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 26 to 44 of 44.       Previous | of 2
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_7D
(Click headers to resort)
Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
Xgpw5140-7D locus 0.46 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-7D Xgpw5140-7D locus 180.9 () Automated name-based View Maps
Xgwm121-7D locus -0.18 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-7D Xgwm121-7D locus 181.9 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-7D Xgwm121-7D locus 101.6 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-7D Xgwm121-7D locus 175.45 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-7D Xgwm121-7D locus 86.6 () Automated name-based View Maps
Xcfd25-7D locus 0.15 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-7D Xcfd25-7D locus 183.4 () Automated name-based View Maps
Wheat ABD - Wheat, Louise x Penawawa - Louise/Penawawa-7D Xcfd25-7D locus 177.1 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-7D Xcfd25-7D locus 110.7 () Automated name-based View Maps
Xgpw5192-7D locus 0.46 Wheat ABD - Wheat, Axiom 2018, OxS - Wheat-Axiom2018-OxS-1A AX-94496122 locus (cM) Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-7D Xgpw5192-7D locus 183.4 () Automated name-based View Maps
Wheat ABD - Wheat-2014-Consensus-Ug99-Update - Wheat-2014-Consensus-Ug99-Update gpw5192 locus 84.32 () Automated name-based View Maps
Wheat ABD - Wheat_Consensus_2014_Ug99_Rust - Wheat_Consensus_2014_Ug99_Rust_7 gpw5192 locus 84.32 () Automated name-based View Maps
Wheat ABD - Wheat, Yr Update, 2021 - Wheat_Yr_2021-7D gpw5192 locus 226.96 (cM) Automated name-based View Maps
Xgpw5137-7D locus 0.46 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-7D Xgpw5137-7D locus 228.3 () Automated name-based View Maps
Xbarc76-7D locus 0.15 Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-7D Xbarc76-7D locus 144.3 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-7D Xbarc76-7D locus 138.1 () Automated name-based View Maps
Wheat ABD - Wheat, Grandin x BR34 - Ta-Grandin/BR34-7D Xbarc76-7D locus 225.9 () Automated name-based View Maps
Xgwm350-7D locus -0.18 Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-7D Xgwm350-7D locus 1.4 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-7D Xgwm350-7D locus 0 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-7D Xgwm350-7D locus 50.2 () Automated name-based View Maps
Xgwm635-7D locus -0.81 Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-7D Xgwm635-7D locus 31.2 () Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-7D Xgwm635-7D locus 12.6 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-7D Xgwm635-7D locus 12.6 () Automated name-based View Maps
Xbarc53-7D locus 0.91 Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-7D Xbarc53-7D locus 129.9 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-7D Xbarc53-7D locus 125.2 () Automated name-based View Maps
Xbarc111-7D locus 0.91 Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-7D Xbarc111-7D locus 92.2 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-7D Xbarc111-7D locus 114.8 () Automated name-based View Maps
7DS4-0.61-1.00 breakpointinterval -1 - -0.61 Wheat ABD - Wheat, Physical, EST - Chinese_Spring_Deletion_7D 7DS4-0.61-1.00 breakpointinterval -1 - -0.61 () Automated name-based View Maps
Wheat ABD - Wheat deletion-line bins - CS-deletions-7D 7DS4-0.61-1.00 breakpointinterval -1 - -0.61 () Automated name-based View Maps
7DS5-0.36-0.61 breakpointinterval -0.61 - -0.36 Wheat ABD - Wheat, Physical, EST - Chinese_Spring_Deletion_7D 7DS5-0.36-0.61 breakpointinterval -0.61 - -0.36 () Automated name-based View Maps
Wheat ABD - Wheat deletion-line bins - CS-deletions-7D 7DS5-0.36-0.61 breakpointinterval -0.61 - -0.36 () Automated name-based View Maps
C-7DS5-0.36 breakpointinterval -0.36 - 0 Wheat ABD - Wheat, Physical, EST - Chinese_Spring_Deletion_7D C-7DS5-0.36 breakpointinterval -0.36 - 0 () Automated name-based View Maps
Wheat ABD - Wheat deletion-line bins - CS-deletions-7D C-7DS5-0.36 breakpointinterval -0.36 - 0 () Automated name-based View Maps
C-7DL5-0.30 breakpointinterval 0 - 0.3 Wheat ABD - Wheat deletion-line bins - CS-deletions-7D C-7DL5-0.30 breakpointinterval 0 - 0.3 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, EST - Chinese_Spring_Deletion_7D C-7DL5-0.30 breakpointinterval 0 - 0.3 () Automated name-based View Maps
7DL5-0.30-0.61 breakpointinterval 0.3 - 0.61 Wheat ABD - Wheat deletion-line bins - CS-deletions-7D 7DL5-0.30-0.61 breakpointinterval 0.3 - 0.61 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, EST - Chinese_Spring_Deletion_7D 7DL5-0.30-0.61 breakpointinterval 0.3 - 0.61 () Automated name-based View Maps
7DL2-0.61-0.82 breakpointinterval 0.61 - 0.82 Wheat ABD - Wheat, Physical, EST - Chinese_Spring_Deletion_7D 7DL2-0.61-0.82 breakpointinterval 0.61 - 0.82 () Automated name-based View Maps
Wheat ABD - Wheat deletion-line bins - CS-deletions-7D 7DL2-0.61-0.82 breakpointinterval 0.61 - 0.82 () Automated name-based View Maps
7DL3-0.82-1.00 breakpointinterval 0.82 - 1 Wheat ABD - Wheat, Physical, EST - Chinese_Spring_Deletion_7D 7DL3-0.82-1.00 breakpointinterval 0.82 - 1 () Automated name-based View Maps
Wheat ABD - Wheat deletion-line bins - CS-deletions-7D 7DL3-0.82-1.00 breakpointinterval 0.82 - 1 () Automated name-based View Maps
C7D breakpointinterval 0 Wheat ABD - Wheat, Physical, EST - Chinese_Spring_Deletion_7D C7D breakpointinterval 0 () Automated name-based View Maps
C-7DS-0.00-1.00* breakpointinterval -1 - 0 No other positions

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.