*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Wheat ABD-Wheat, Synthetic x Opata
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Ta-Synthetic/Opata-2D
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Wheat ABD - Wheat, Synthetic x Opata [ View Map Set Info ]
Map Name: Ta-Synthetic/Opata-2D
Map Start: -3
Map Stop: 205.2
Features by Type:
57 locus
57 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 26 to 50 of 57.       Previous | of 3 | Next
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-2D
(Click headers to resort)
Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
Xfba349-2D locus -3 Wheat ABD - Wheat, Synthetic x Opata, SSR 2 - Ta-Synthetic/Opata-SSR2-2D Xfba349-2D locus 19 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-2D Xfba349-2D locus 18.1 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, gbx RFLP - Ta-Synthetic/Opata-gbx-2D Xfba349-2D locus 0 () Automated name-based View Maps
Xfba400-2D locus 48.9 Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-2D Xfba400-2D locus 24.1 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-2D Xfba400-2D locus 67.5 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, gbx RFLP - Ta-Synthetic/Opata-gbx-2D Xfba400-2D locus 48.5 () Automated name-based View Maps
Xfbb279-2D locus 98.4 Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-2D Xfbb279-2D locus 36.2 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-2D Xfbb279-2D locus 110.4 () Automated name-based View Maps
Xfba111-2D locus 154.9 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-2D Xfba111-2D locus 154.2 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-2D Xfba111-2D locus 63.4 () Automated name-based View Maps
Xfbb284-2D locus 156.5 Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-2D Xfbb284-2D locus 62.3 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-2D Xfbb284-2D locus 154.8 () Automated name-based View Maps
Xfba102-2D locus 170.1 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-2D Xfba102-2D locus 169.8 () Automated name-based View Maps
Xfbb251-2D locus 174.3 Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-2D Xfbb251-2D locus 70.8 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-2D Xfbb251-2D locus 173.6 () Automated name-based View Maps
Xrz444-2D locus 186.1 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-2D Xrz444-2D locus 182.9 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-2D Xrz444-2D locus 74.8 () Automated name-based View Maps
Xfbb377-2D locus 186.1 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-2D Xfbb377-2D locus 183.2 () Automated name-based View Maps
Xfba311-2D locus 202.2 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-2D Xfba311-2D locus 198.8 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-2D Xfba311-2D locus 84.1 () Automated name-based View Maps
Xfba116-2D locus 170.1 Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-2D Xfba116-2D locus 67.9 () Automated name-based View Maps
Xfba038-2D locus 119.5 No other positions
Xfba061-2D locus 156.5 No other positions
Xfba064-2D locus 156.5 No other positions
Xfba065-2D locus 119.5 No other positions
Xfba074-2D locus 149.8 Wheat ABD - Wheat, Synthetic x Opata, gbx RFLP - Ta-Synthetic/Opata-gbx-2D Xfba074-2D locus 139.2 () Automated name-based View Maps
Xfba088-2D locus 57 No other positions
Xfbb068-2D locus 162.1 No other positions
Xfbb072-2D locus 177.9 No other positions
Xfbb009-2D locus 170.9 No other positions
Xfbb099-2D locus 149 No other positions
Xbcd611-2D locus 57 Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-2D Xbcd611-2D locus 21.1 () Automated name-based View Maps
Xfba062-2D locus 154.9 No other positions
Xfba083-2D locus 25.5 No other positions
Xfba209-2D.1 locus 186.1 No other positions

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.