*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Wheat ABD-Wheat, Synthetic x Opata, BARC
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Ta-Synthetic/Opata-BARC-6D
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
baccontig
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Wheat ABD - Wheat, Synthetic x Opata, BARC [ View Map Set Info ]
Map Name: Ta-Synthetic/Opata-BARC-6D
Map Start: 0
Map Stop: 116.5
Features by Type:
24 baccontig
61 locus
85 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 26 to 50 of 85.       Previous | of 4 | Next
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-6D
(Click headers to resort)
Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
Xfba85-6D locus 34.6 Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-6D Xfba85-6D locus -37.5 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR 2 - Ta-Synthetic/Opata-SSR2-6D Xfba85-6D locus 43.5 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-6D Xfba85-6D locus 43.5 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-6D Xfba85-6D locus 32.5 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR-D - Ta-Synthetic/Opata-SSR_D-6D Xfba85-6D locus 36.4 () Automated name-based View Maps
Xcdo534-6D locus 59.8 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-6D Xcdo534-6D locus 86.6 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-6D Xcdo534-6D locus -4.8 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-6D Xcdo534-6D locus 56.9 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR-D - Ta-Synthetic/Opata-SSR_D-6D Xcdo534-6D locus 68.3 () Automated name-based View Maps
Xfbb70-6D locus 107.2 Wheat ABD - Wheat, Synthetic x Opata, SSR-D - Ta-Synthetic/Opata-SSR_D-6D Xfbb70-6D locus 154.3 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-6D Xfbb70-6D locus 105.8 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-6D Xfbb70-6D locus 179.8 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-6D Xfbb70-6D locus 136.1 () Automated name-based View Maps
Xgwm55-6D locus 60.1 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-6D Xgwm55-6D locus 87.4 () Automated name-based View Maps
Wheat ABD - Wheat, Courtot x Chinese Spring, GPW - Ta-Courtot/CS-GPW-6D Xgwm55-6D locus 27.4 () Automated name-based View Maps
Wheat ABD - Wheat, P91193D1 x P92201D5 - P91193D1/P92201D5-6D Xgwm55-6D locus 33.9 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-6D Xgwm55-6D locus 73.05 () Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-6D Xgwm55-6D locus 109.8 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_6D Xgwm55-6D locus 0.14 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-6D Xgwm55-6D locus 57 () Automated name-based View Maps
Wheat ABD - Wheat, Louise x Penawawa - Louise/Penawawa-6D Xgwm55-6D locus 108.4 () Automated name-based View Maps
Xcdo836-6D locus 95.1 Wheat ABD - Wheat, Courtot x Chinese Spring, GPW - Ta-Courtot/CS-GPW-6D Xcdo836-6D locus 129.5 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-6D Xcdo836-6D locus 70 () Automated name-based View Maps
Xabg466-6D locus 8.8 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-6D Xabg466-6D locus 9 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-6D Xabg466-6D locus -76.5 () Automated name-based View Maps
Xfba307-6D locus 13.3 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-6D Xfba307-6D locus 15.4 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR 2 - Ta-Synthetic/Opata-SSR2-6D Xfba307-6D locus 15.4 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-6D Xfba307-6D locus -70.5 () Automated name-based View Maps
Xmwg549-6D locus 30.7 Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-6D Xmwg549-6D locus -62 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-6D Xmwg549-6D locus 22.2 () Automated name-based View Maps
Xfba1-6D locus 24.3 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-6D Xfba1-6D locus 24.7 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-6D Xfba1-6D locus -55.5 () Automated name-based View Maps
Xfba187-6D locus 27.4 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-6D Xfba187-6D locus 30.7 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-6D Xfba187-6D locus -49.5 () Automated name-based View Maps
Xfbb354-6D locus 32.9 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-6D Xfbb354-6D locus 41.5 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-6D Xfbb354-6D locus -45.5 () Automated name-based View Maps
Xfbb283-6D locus 41.3 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-6D Xfbb283-6D locus 51.4 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-6D Xfbb283-6D locus -22 () Automated name-based View Maps
Xmwg916-6D locus 42.3 Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-6D Xmwg916-6D locus -28.3 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-6D Xmwg916-6D locus 54.7 () Automated name-based View Maps
Xpsr627-6D locus 46.4 Wheat ABD - Wheat, Gale - Ta-Gale-6D Xpsr627-6D locus -22.2 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-6D Xpsr627-6D locus -18.2 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-6D Xpsr627-6D locus 54.9 () Automated name-based View Maps
Xgwm325-6D locus 61.6 Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-6D Xgwm325-6D locus 52.9 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-6D Xgwm325-6D locus 47.25 () Automated name-based View Maps
Wheat ABD - Wheat, Grandin x BR34 - Ta-Grandin/BR34-6D Xgwm325-6D locus 84 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-6D Xgwm325-6D locus 80 () Automated name-based View Maps
Xtam31-6D locus 59.8 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-6D Xtam31-6D locus 87 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-6D Xtam31-6D locus -3.2 () Automated name-based View Maps
Xabg20-6D locus 60.3 Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-6D Xabg20-6D locus 1 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-6D Xabg20-6D locus 87.5 () Automated name-based View Maps
Xbcd1398-6D locus 60.7 Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-6D Xbcd1398-6D locus 0.5 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-6D Xbcd1398-6D locus 87.5 () Automated name-based View Maps
Xbcd357-6D locus 63.7 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-6D Xbcd357-6D locus 89 () Automated name-based View Maps
Xfba381-6D locus 72.1 Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-6D Xfba381-6D locus 16.3 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-6D Xfba381-6D locus 97.8 () Automated name-based View Maps
Xtam28-6D locus 80.3 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-6D Xtam28-6D locus 128.5 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-6D Xtam28-6D locus 55.8 () Automated name-based View Maps
Xfbb169-6D locus 75.1 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-6D Xfbb169-6D locus 130.3 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-6D Xfbb169-6D locus 53.2 () Automated name-based View Maps
XksuD1-6D locus 91.8 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-6D XksuD1-6D locus 141.4 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-6D XksuD1-6D locus 61 () Automated name-based View Maps
Xfbb59-6D locus 106.7 Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-6D Xfbb59-6D locus 103.2 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-6D Xfbb59-6D locus 178.9 () Automated name-based View Maps
Xpsr8(Cxp3)-6D locus 22.9 Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-6D Xpsr8(Cxp3)-6D locus -57.5 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, gbx RFLP - Ta-Synthetic/Opata-gbx-6D Xpsr8(Cxp3)-6D locus 32.4 () Automated name-based View Maps

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.