*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Wheat ABD-Wheat, Synthetic x Opata, DR Genes
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Ta-Synthetic/Opata-DR-4D
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
baccontig
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Wheat ABD - Wheat, Synthetic x Opata, DR Genes [ View Map Set Info ]
Map Name: Ta-Synthetic/Opata-DR-4D
Map Start: -52.2
Map Stop: 90.4
Features by Type:
10 baccontig
12 locus
22 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 22 of 22.
Wheat ABD - Wheat, Synthetic x Opata, DR Genes - Ta-Synthetic/Opata-DR-4D
(Click headers to resort)
Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
Xmwg634-4D locus -52.2 Wheat ABD - Wheat, Synthetic x Opata, SSR-D - Ta-Synthetic/Opata-SSR_D-4D Xmwg634-4D locus 0 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-4D Xmwg634-4D locus 0 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, gbx RFLP - Ta-Synthetic/Opata-gbx-4D Xmwg634-4D locus 0 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-4D Xmwg634-4D locus 0 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-4D Xmwg634-4D locus 0 () Automated name-based View Maps
Xcdo669-4D locus -25.4 Wheat ABD - Wheat, Synthetic x Opata, gbx RFLP - Ta-Synthetic/Opata-gbx-4D Xcdo669-4D locus 26.8 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-4D Xcdo669-4D locus 26.8 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-4D Xcdo669-4D locus 17.2 () Automated name-based View Maps
Xbcd265-4D locus -10 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-4D Xbcd265-4D locus 0 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, gbx RFLP - Ta-Synthetic/Opata-gbx-4D Xbcd265-4D locus 42.2 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-4D Xbcd265-4D locus 42.2 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-4D Xbcd265-4D locus 32 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-4D Xbcd265-4D locus 30.9 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR 2 - Ta-Synthetic/Opata-SSR2-4D Xbcd265-4D locus 0 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR-D - Ta-Synthetic/Opata-SSR_D-4D Xbcd265-4D locus 33.2 () Automated name-based View Maps
Xbcd327-4D locus -1.3 Wheat ABD - Wheat, Synthetic x Opata, SSR-D - Ta-Synthetic/Opata-SSR_D-4D Xbcd327-4D locus 42.6 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-4D Xbcd327-4D locus 10.3 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-4D Xbcd327-4D locus 39.9 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-4D Xbcd327-4D locus 40.6 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-4D Xbcd327-4D locus 50.9 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, gbx RFLP - Ta-Synthetic/Opata-gbx-4D Xbcd327-4D locus 51.6 () Automated name-based View Maps
Centromere-4D locus 0 Wheat ABD - Wheat, Grandin x BR34 - Ta-Grandin/BR34-4D Centromere-4D locus 29.5 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-4D Centromere-4D locus 40.6 - 44.4 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR 2 - Ta-Synthetic/Opata-SSR2-4D Centromere-4D locus 13.5 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, R Genes - Ta-Physical-RGenes-4D Centromere-4D locus 0 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR-D - Ta-Synthetic/Opata-SSR_D-4D Centromere-4D locus 45 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, gbx RFLP - Ta-Synthetic/Opata-gbx-4D Centromere-4D locus 53 () Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-4D Centromere-4D locus 0 () Automated name-based View Maps
XksuF8-4D locus 2.5 Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-4D XksuF8-4D locus 43.8 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-4D XksuF8-4D locus 44.4 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-4D XksuF8-4D locus 14 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR-D - Ta-Synthetic/Opata-SSR_D-4D XksuF8-4D locus 48 () Automated name-based View Maps
Wheat ABD - Wheat, Gale - Ta-Gale-4D XksuF8-4D locus 5.7 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-4D XksuF8-4D locus 54.7 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR 2 - Ta-Synthetic/Opata-SSR2-4D XksuF8-4D locus 15.7 () Automated name-based View Maps
Xbcd15-4D locus 12.7 Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-4D Xbcd15-4D locus 70.5 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-4D Xbcd15-4D locus 55.4 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-4D Xbcd15-4D locus 25.9 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR-D - Ta-Synthetic/Opata-SSR_D-4D Xbcd15-4D locus 58.6 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, gbx RFLP - Ta-Synthetic/Opata-gbx-4D Xbcd15-4D locus 71.5 () Automated name-based View Maps
Xfbb178-4D locus 18 Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-4D Xfbb178-4D locus 62.6 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-4D Xfbb178-4D locus 31.4 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-4D Xfbb178-4D locus 76.1 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR-D - Ta-Synthetic/Opata-SSR_D-4D Xfbb178-4D locus 63.9 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR 2 - Ta-Synthetic/Opata-SSR2-4D Xfbb178-4D locus 30.9 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-4D Xfbb178-4D locus 58.9 () Automated name-based View Maps
Xcdo1312-4D locus 26.1 Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-4D Xcdo1312-4D locus 73 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR-D - Ta-Synthetic/Opata-SSR_D-4D Xcdo1312-4D locus 72.1 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR 2 - Ta-Synthetic/Opata-SSR2-4D Xcdo1312-4D locus 40.6 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, gbx RFLP - Ta-Synthetic/Opata-gbx-4D Xcdo1312-4D locus 80.6 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-4D Xcdo1312-4D locus 64.4 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-4D Xcdo1312-4D locus 84.1 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-4D Xcdo1312-4D locus 41.4 () Automated name-based View Maps
Xbcd1431-4D locus 37.2 Wheat ABD - Wheat, Synthetic x Opata, SSR 2 - Ta-Synthetic/Opata-SSR2-4D Xbcd1431-4D locus 52 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-4D Xbcd1431-4D locus 86.1 () Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-4D Xbcd1431-4D locus 25.2 () Automated name-based View Maps
Xfba177-4D locus 63.8 Wheat ABD - Wheat, Synthetic x Opata, SSR-D - Ta-Synthetic/Opata-SSR_D-4D Xfba177-4D locus 112 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-4D Xfba177-4D locus 121.8 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-4D Xfba177-4D locus 112.8 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-4D Xfba177-4D locus 98.1 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR 2 - Ta-Synthetic/Opata-SSR2-4D Xfba177-4D locus 77.8 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, gbx RFLP - Ta-Synthetic/Opata-gbx-4D Xfba177-4D locus 115.7 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-4D Xfba177-4D locus 78.7 () Automated name-based View Maps
Xksu920(Oxo)-4D locus 90.4 No other positions
D1.1_ctg11889 baccontig -10 Wheat ABD - Wheat, Yr Update, 2021 - Wheat_Yr_2021-4D D1.1_ctg11889 baccontig 51.14 (cM) Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 4D D1.1_ctg11889 baccontig 30 () Automated name-based View Maps
Wheat ABD - Wheat, Physical - Ta-Physical-Gill-1D D1.1_ctg11889 baccontig 4.46 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Physical, EST - Chinese_Spring_Deletion_1D D1.1_ctg11889 baccontig -0.85 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-4D D1.1_ctg11889 baccontig 30.9 () Automated name-based View Maps
D1.1_ctg4222 baccontig 12.7 Wheat ABD - Wheat, Physical, EST - Chinese_Spring_Deletion_3D D1.1_ctg4222 baccontig -0.4 () Automated name-based View Maps
Wheat ABD - Wheat, Yr Update, 2021 - Wheat_Yr_2021-4D D1.1_ctg4222 baccontig 91.24 (cM) Automated name-based View Maps
Wheat ABD - Wheat, Physical - Ta-Physical-Gill-5D D1.1_ctg4222 baccontig 4.81 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-4D D1.1_ctg4222 baccontig 55.4 () Automated name-based View Maps
Wheat ABD - Wheat, Composite, 2004 - Wheat-Composite2004-4D D1.1_ctg4222 baccontig 74 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 4D D1.1_ctg4222 baccontig 53.5 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, EST - Chinese_Spring_Deletion_4D D1.1_ctg4222 baccontig 0.86 () Automated name-based View Maps
D1.1_ctg5162 baccontig -10 Wheat ABD - Wheat, Composite, 2004 - Wheat-Composite2004-1D D1.1_ctg5162 baccontig 47 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-4D D1.1_ctg5162 baccontig 30.9 () Automated name-based View Maps
Wheat ABD - Wheat, Physical - Ta-Physical-Gill-1D D1.1_ctg5162 baccontig 4.46 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Yr Update, 2021 - Wheat_Yr_2021-4D D1.1_ctg5162 baccontig 51.14 (cM) Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 4D D1.1_ctg5162 baccontig 30 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, EST - Chinese_Spring_Deletion_4D D1.1_ctg5162 baccontig -0.91 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, EST - Chinese_Spring_Deletion_1D D1.1_ctg5162 baccontig 0.7 () Automated name-based View Maps
D1.1_ctg5357 baccontig -10 Wheat ABD - Wheat, Yr Update, 2021 - Wheat_Yr_2021-4D D1.1_ctg5357 baccontig 51.14 (cM) Automated name-based View Maps
Wheat ABD - Wheat, Physical, EST - Chinese_Spring_Deletion_1D D1.1_ctg5357 baccontig 0.59 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-4D D1.1_ctg5357 baccontig 30.9 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, EST - Chinese_Spring_Deletion_4D D1.1_ctg5357 baccontig 0.64 () Automated name-based View Maps
Wheat ABD - Wheat, Composite, 2004 - Wheat-Composite2004-1D D1.1_ctg5357 baccontig 47 () Automated name-based View Maps
Wheat ABD - Wheat, Physical - Ta-Physical-Gill-1D D1.1_ctg5357 baccontig 4.46 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 4D D1.1_ctg5357 baccontig 30 () Automated name-based View Maps
D1.1_ctg5368 baccontig -10 Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 4D D1.1_ctg5368 baccontig 30 () Automated name-based View Maps
Wheat ABD - Wheat, Yr Update, 2021 - Wheat_Yr_2021-4D D1.1_ctg5368 baccontig 51.14 (cM) Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-4D D1.1_ctg5368 baccontig 30.9 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, EST - Chinese_Spring_Deletion_4D D1.1_ctg5368 baccontig -0.91 () Automated name-based View Maps
Wheat ABD - Wheat, Physical - Ta-Physical-Gill-1D D1.1_ctg5368 baccontig 4.46 () Automated name-based, Automated name-based View Maps
D1.1_ctg6064 baccontig 37.2 Wheat ABD - Wheat, Gale - Ta-Gale-3D D1.1_ctg6064 baccontig 20.3 () Automated name-based View Maps
Wheat ABD - Wheat, Gale - Ta-Gale-5D D1.1_ctg6064 baccontig -32.1 () Automated name-based View Maps
Wheat ABD - Wheat, Physical - Ta-Physical-Gill-3D D1.1_ctg6064 baccontig 2.94 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Composite, 2004 - Wheat-Composite2004-3D D1.1_ctg6064 baccontig 90 () Automated name-based View Maps
Wheat ABD - Wheat, Composite, 2004 - Wheat-Composite2004-1D D1.1_ctg6064 baccontig 0 () Automated name-based View Maps
D1.1_ctg6238 baccontig 12.7 Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-4D D1.1_ctg6238 baccontig 55.4 () Automated name-based View Maps
Wheat ABD - Wheat, Yr Update, 2021 - Wheat_Yr_2021-4D D1.1_ctg6238 baccontig 91.24 (cM) Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 4D D1.1_ctg6238 baccontig 53.5 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, EST - Chinese_Spring_Deletion_1D D1.1_ctg6238 baccontig -0.85 () Automated name-based View Maps
Wheat ABD - Wheat, Composite, 2004 - Wheat-Composite2004-4D D1.1_ctg6238 baccontig 74 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, EST - Chinese_Spring_Deletion_7D D1.1_ctg6238 baccontig 0.15 () Automated name-based View Maps
D1.1_ctg6392 baccontig 12.7 Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 4D D1.1_ctg6392 baccontig 53.5 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-4D D1.1_ctg6392 baccontig 55.4 () Automated name-based View Maps
Wheat ABD - Wheat, Composite, 2004 - Wheat-Composite2004-4D D1.1_ctg6392 baccontig 74 () Automated name-based View Maps
Wheat ABD - Wheat, Yr Update, 2021 - Wheat_Yr_2021-4D D1.1_ctg6392 baccontig 91.24 (cM) Automated name-based View Maps
D1.1_ctg8441 baccontig 37.2 Wheat ABD - Wheat, Composite, 2004 - Wheat-Composite2004-3D D1.1_ctg8441 baccontig 90 () Automated name-based View Maps
Wheat ABD - Wheat, Physical - Ta-Physical-Gill-3D D1.1_ctg8441 baccontig 2.94 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Composite, 2004 - Wheat-Composite2004-1D D1.1_ctg8441 baccontig 0 () Automated name-based View Maps
Wheat ABD - Wheat, Gale - Ta-Gale-3D D1.1_ctg8441 baccontig 20.3 () Automated name-based View Maps
Wheat ABD - Wheat, Gale - Ta-Gale-5D D1.1_ctg8441 baccontig -32.1 () Automated name-based View Maps
D1.1_ctg9337 baccontig 26.1 Wheat ABD - Wheat, Physical - Ta-Physical-Gill-4D D1.1_ctg9337 baccontig 4.94 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-4D D1.1_ctg9337 baccontig 64.4 () Automated name-based View Maps
Wheat ABD - Wheat, Yr Update, 2021 - Wheat_Yr_2021-4D D1.1_ctg9337 baccontig 97.93 (cM) Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 4D D1.1_ctg9337 baccontig 57.5 () Automated name-based View Maps

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.