*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Wheat ABD-Wheat, Synthetic x Opata, DR Genes
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Ta-Synthetic/Opata-DR-7D
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
baccontig
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Wheat ABD - Wheat, Synthetic x Opata, DR Genes [ View Map Set Info ]
Map Name: Ta-Synthetic/Opata-DR-7D
Map Start: -67.9
Map Stop: 120.7
Features by Type:
9 baccontig
18 locus
27 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 27.       of 2 | Next
Wheat ABD - Wheat, Synthetic x Opata, DR Genes - Ta-Synthetic/Opata-DR-7D
(Click headers to resort)
Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
Xcdo775-7D locus 18.9 Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-7D Xcdo775-7D locus 163.9 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-7D Xcdo775-7D locus 74.9 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-7D Xcdo775-7D locus 97.8 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-7D Xcdo775-7D locus 154.5 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR 2 - Ta-Synthetic/Opata-SSR2-7D Xcdo775-7D locus 197.9 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, gbx RFLP - Ta-Synthetic/Opata-gbx-7D Xcdo775-7D locus 85.1 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR-D - Ta-Synthetic/Opata-SSR_D-7D Xcdo775-7D locus 153.9 () Automated name-based View Maps
Xwg834-7D locus -67.9 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-7D Xwg834-7D locus 64.4 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, gbx RFLP - Ta-Synthetic/Opata-gbx-7D Xwg834-7D locus 11.8 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR 2 - Ta-Synthetic/Opata-SSR2-7D Xwg834-7D locus 89.6 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-7D Xwg834-7D locus 87.7 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-7D Xwg834-7D locus 9.6 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR-D - Ta-Synthetic/Opata-SSR_D-7D Xwg834-7D locus 81.7 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-7D Xwg834-7D locus 12.5 () Automated name-based View Maps
Xbcd1438-7D locus -61.3 Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-7D Xbcd1438-7D locus 18.7 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR-D - Ta-Synthetic/Opata-SSR_D-7D Xbcd1438-7D locus 88.1 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-7D Xbcd1438-7D locus 69.8 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-7D Xbcd1438-7D locus 94.1 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-7D Xbcd1438-7D locus 13.1 () Automated name-based View Maps
Xmwg710-7D locus -54.5 Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-7D Xmwg710-7D locus 18 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, gbx RFLP - Ta-Synthetic/Opata-gbx-7D Xmwg710-7D locus 23.1 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-7D Xmwg710-7D locus 24.5 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-7D Xmwg710-7D locus 74.2 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR 2 - Ta-Synthetic/Opata-SSR2-7D Xmwg710-7D locus 99.3 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR-D - Ta-Synthetic/Opata-SSR_D-7D Xmwg710-7D locus 93.7 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-7D Xmwg710-7D locus 99.5 () Automated name-based View Maps
Xrz2-7D locus -36.6 Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-7D Xrz2-7D locus 44.1 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR 2 - Ta-Synthetic/Opata-SSR2-7D Xrz2-7D locus 120.4 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-7D Xrz2-7D locus 28.9 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-7D Xrz2-7D locus 95.3 () Automated name-based View Maps
Xfba377-7D locus -16.5 Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-7D Xfba377-7D locus 42.6 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-7D Xfba377-7D locus 62.7 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, gbx RFLP - Ta-Synthetic/Opata-gbx-7D Xfba377-7D locus 48.6 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-7D Xfba377-7D locus 115.6 () Automated name-based View Maps
Xksu930(Pr1)-7D locus -9 No other positions
Xksu921(Mpc1)-7D locus -9 No other positions
Xbcd707-7D locus -0.2 Wheat ABD - Wheat, Synthetic x Opata, SSR-D - Ta-Synthetic/Opata-SSR_D-7D Xbcd707-7D locus 135.9 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-7D Xbcd707-7D locus 78.8 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR 2 - Ta-Synthetic/Opata-SSR2-7D Xbcd707-7D locus 162.6 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-7D Xbcd707-7D locus 58.5 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, gbx RFLP - Ta-Synthetic/Opata-gbx-7D Xbcd707-7D locus 66.1 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-7D Xbcd707-7D locus 144.9 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-7D Xbcd707-7D locus 137.3 () Automated name-based View Maps
Centromere-7D locus 0 Wheat ABD - Wheat, Forno x Oberkulmer - Triticum-FxO-7D Centromere-7D locus 75 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, gbx RFLP - Ta-Synthetic/Opata-gbx-7D Centromere-7D locus 66.1 () Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-7D Centromere-7D locus 121 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR-D - Ta-Synthetic/Opata-SSR_D-7D Centromere-7D locus 140.4 () Automated name-based View Maps
Wheat ABD - Wheat, 2002, coleoptile color - Wheat-2002-ColeoptileColor-7D Centromere-7D locus 69.1 (cM) Automated name-based View Maps
Wheat ABD - Wheat, Physical, R Genes - Ta-Physical-RGenes-7D Centromere-7D locus 0 () Automated name-based View Maps
Wheat ABD - Wheat, Grandin x BR34 - Ta-Grandin/BR34-7D Centromere-7D locus 125.9 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR 2 - Ta-Synthetic/Opata-SSR2-7D Centromere-7D locus 150.7 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-7D Centromere-7D locus 125 - 128.8 () Automated name-based View Maps
Xwg719-7D locus 9.9 Wheat ABD - Wheat, Synthetic x Opata, gbx RFLP - Ta-Synthetic/Opata-gbx-7D Xwg719-7D locus 76.1 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-7D Xwg719-7D locus 88.8 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-7D Xwg719-7D locus 67.3 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-7D Xwg719-7D locus 154.9 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-7D Xwg719-7D locus 140.5 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR-D - Ta-Synthetic/Opata-SSR_D-7D Xwg719-7D locus 145.5 () Automated name-based View Maps
Xfbb79-7D locus 46.5 Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-7D Xfbb79-7D locus 125.4 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, gbx RFLP - Ta-Synthetic/Opata-gbx-7D Xfbb79-7D locus 115.5 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-7D Xfbb79-7D locus 97.6 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR-D - Ta-Synthetic/Opata-SSR_D-7D Xfbb79-7D locus 181.4 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-7D Xfbb79-7D locus 183.9 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-7D Xfbb79-7D locus 187 () Automated name-based View Maps
Xmwg975-7D locus 54.6 Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-7D Xmwg975-7D locus 96.9 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, gbx RFLP - Ta-Synthetic/Opata-gbx-7D Xmwg975-7D locus 122 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR 2 - Ta-Synthetic/Opata-SSR2-7D Xmwg975-7D locus 235.1 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-7D Xmwg975-7D locus 133.6 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-7D Xmwg975-7D locus 191.1 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-7D Xmwg975-7D locus 197.7 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR-D - Ta-Synthetic/Opata-SSR_D-7D Xmwg975-7D locus 192.2 () Automated name-based View Maps
Xwg420-7D locus 62.3 Wheat ABD - Wheat, Synthetic x Opata, SSR-D - Ta-Synthetic/Opata-SSR_D-7D Xwg420-7D locus 199.9 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-7D Xwg420-7D locus 205.4 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-7D Xwg420-7D locus 196.2 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-7D Xwg420-7D locus 141.3 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-7D Xwg420-7D locus 102.8 () Automated name-based View Maps
Xfba204-7D locus 71 Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-7D Xfba204-7D locus 211.3 () Automated name-based View Maps
Wheat ABD - Wheat, Courtot x Chinese Spring, GPW - Ta-Courtot/CS-GPW-7D Xfba204-7D locus 234.2 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR-D - Ta-Synthetic/Opata-SSR_D-7D Xfba204-7D locus 207.1 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-7D Xfba204-7D locus 202.4 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-7D Xfba204-7D locus 109.4 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR 2 - Ta-Synthetic/Opata-SSR2-7D Xfba204-7D locus 245.2 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-7D Xfba204-7D locus 150 () Automated name-based View Maps
XksuE3-7D locus 106.4 Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-7D XksuE3-7D locus 243.8 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-7D XksuE3-7D locus 149.2 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-7D XksuE3-7D locus 186.6 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR-D - Ta-Synthetic/Opata-SSR_D-7D XksuE3-7D locus 244.7 () Automated name-based View Maps
Xksu928(Chi1)-7D locus 120.7 No other positions
Xksu910(Tha)-7D locus 120.7 No other positions
D1.1_ctg10053 baccontig 46.5 Wheat ABD - Wheat, Physical, EST - Chinese_Spring_Deletion_4D D1.1_ctg10053 baccontig 0.64 () Automated name-based View Maps
Wheat ABD - Wheat, Composite, 2004 - Wheat-Composite2004-7D D1.1_ctg10053 baccontig 174 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-7D D1.1_ctg10053 baccontig 97.6 () Automated name-based View Maps
D1.1_ctg11444 baccontig 54.6 Wheat ABD - Wheat, Composite, 2004 - Wheat-Composite2004-7D D1.1_ctg11444 baccontig 180 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-7D D1.1_ctg11444 baccontig 96.9 () Automated name-based View Maps
D1.1_ctg1525 baccontig -67.9 Wheat ABD - Wheat, Composite, 2004 - Wheat-Composite2004-7D D1.1_ctg1525 baccontig 59 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-7D D1.1_ctg1525 baccontig 9.6 () Automated name-based View Maps
D1.1_ctg3427 baccontig -0.2 Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-7D D1.1_ctg3427 baccontig 58.5 () Automated name-based View Maps
D1.1_ctg3701 baccontig -54.5 Wheat ABD - Wheat, Composite, 2004 - Wheat-Composite2004-7D D1.1_ctg3701 baccontig 81 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, EST - Chinese_Spring_Deletion_3D D1.1_ctg3701 baccontig 0.54 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-7D D1.1_ctg3701 baccontig 18 () Automated name-based View Maps
Wheat ABD - Wheat, Physical - Ta-Physical-Gill-1D D1.1_ctg3701 baccontig 4.46 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Gale - Ta-Gale-7D D1.1_ctg3701 baccontig -1 () Automated name-based View Maps
Wheat ABD - Wheat, Composite, 2004 - Wheat-Composite2004-4D D1.1_ctg3701 baccontig 91 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, EST - Chinese_Spring_Deletion_1D D1.1_ctg3701 baccontig -0.85 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, EST - Chinese_Spring_Deletion_2D D1.1_ctg3701 baccontig 0.62 () Automated name-based View Maps
D1.1_ctg4161 baccontig -54.5 Wheat ABD - Wheat, Composite, 2004 - Wheat-Composite2004-4D D1.1_ctg4161 baccontig 91 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-7D D1.1_ctg4161 baccontig 18 () Automated name-based View Maps
Wheat ABD - Wheat, Composite, 2004 - Wheat-Composite2004-7D D1.1_ctg4161 baccontig 81 () Automated name-based View Maps
Wheat ABD - Wheat, Gale - Ta-Gale-7D D1.1_ctg4161 baccontig -1 () Automated name-based View Maps
Wheat ABD - Wheat, Physical - Ta-Physical-Gill-1D D1.1_ctg4161 baccontig 4.46 () Automated name-based, Automated name-based View Maps
D1.1_ctg5098 baccontig -67.9 Wheat ABD - Wheat, Composite, 2004 - Wheat-Composite2004-7D D1.1_ctg5098 baccontig 59 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-7D D1.1_ctg5098 baccontig 9.6 () Automated name-based View Maps

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.