*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Wheat ABD-Wheat, Synthetic x Opata, GPW
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Ta-Synthetic/Opata-GPW-3A
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Wheat ABD - Wheat, Synthetic x Opata, GPW [ View Map Set Info ]
Map Name: Ta-Synthetic/Opata-GPW-3A
Map Start: -6
Map Stop: 219.4
Features by Type:
98 locus
98 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 26 to 50 of 98.       Previous | of 4 | Next
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-3A
(Click headers to resort)
Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
Xfba366-3A locus 11.7 Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-3A Xfba366-3A locus 20 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-3A Xfba366-3A locus 34.3 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, update - Ta-Synthetic/Opata-update-3A Xfba366-3A locus 36.2 () Automated name-based View Maps
Xcdo460-3A locus 13.1 Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-3A Xcdo460-3A locus 6.5 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, update - Ta-Synthetic/Opata-update-3A Xcdo460-3A locus 34.2 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-3A Xcdo460-3A locus 16.5 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-3A Xcdo460-3A locus 32.3 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR 2 - Ta-Synthetic/Opata-SSR2-3A Xcdo460-3A locus 13.1 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, gbx RFLP - Ta-Synthetic/Opata-gbx-3A Xcdo460-3A locus 12.1 () Automated name-based View Maps
Wheat AB - T.dicoccoides, FHB QTL - Tdicoccoides-FHB-QTL-3AS Xcdo460-3A locus 5.3 () Automated name-based View Maps
Xfba91-3A locus 21.5 Wheat ABD - Wheat, Synthetic x Opata, update - Ta-Synthetic/Opata-update-3A Xfba91-3A locus 50.6 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-3A Xfba91-3A locus 42.4 () Automated name-based View Maps
Xcfd2-3A locus 26.7 Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-3A Xcfd2-3A locus 81.8 () Automated name-based View Maps
Xgpw4074-3A locus 27.7 No other positions
Xgpw2142-3A locus 27.7 No other positions
Xcdo1345-3A locus 32.2 Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-3A Xcdo1345-3A locus 49.1 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-3A Xcdo1345-3A locus 40.1 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR 2 - Ta-Synthetic/Opata-SSR2-3A Xcdo1345-3A locus 32.2 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, update - Ta-Synthetic/Opata-update-3A Xcdo1345-3A locus 70.2 () Automated name-based View Maps
Xbcd1823-3A locus 32.2 Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-3A Xbcd1823-3A locus 49.6 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-3A Xbcd1823-3A locus 38.7 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, update - Ta-Synthetic/Opata-update-3A Xbcd1823-3A locus 70.2 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-3A Xbcd1823-3A locus 28.9 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, gbx RFLP - Ta-Synthetic/Opata-gbx-3A Xbcd1823-3A locus 31.4 () Automated name-based View Maps
Xabg471-3A locus 32.4 Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-3A Xabg471-3A locus 40.1 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-3A Xabg471-3A locus 49.7 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, update - Ta-Synthetic/Opata-update-3A Xabg471-3A locus 69.3 () Automated name-based View Maps
Xcdo1164-3A locus 33.7 Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-3A Xcdo1164-3A locus 50.3 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-3A Xcdo1164-3A locus 33.7 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, update - Ta-Synthetic/Opata-update-3A Xcdo1164-3A locus 67.4 () Automated name-based View Maps
Xabg460-3A locus 34.2 Wheat A - T. monococcum, DV92 x G3116 - Tm-Dubcovsky2-3A Xabg460-3A locus -9.8 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-3A Xabg460-3A locus 53.1 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-3A Xabg460-3A locus 33.7 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, update - Ta-Synthetic/Opata-update-3A Xabg460-3A locus 64.3 () Automated name-based View Maps
Xbcd1532-3A locus 34.4 Wheat ABD - Wheat, Synthetic x Opata, update - Ta-Synthetic/Opata-update-3A Xbcd1532-3A locus 77.3 () Automated name-based View Maps
Wheat AB - T.dicoccoides, FHB QTL - Tdicoccoides-FHB-QTL-3AS Xbcd1532-3A locus 20.3 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-3A Xbcd1532-3A locus 51.9 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-3A Xbcd1532-3A locus 46.7 () Automated name-based View Maps
Xcdo1435-3A locus 34.4 Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-3A Xcdo1435-3A locus 52.1 () Automated name-based View Maps
Wheat AB - T.dicoccoides, FHB QTL - Tdicoccoides-FHB-QTL-3AS Xcdo1435-3A locus 20.3 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-3A Xcdo1435-3A locus 43.6 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, update - Ta-Synthetic/Opata-update-3A Xcdo1435-3A locus 78.3 () Automated name-based View Maps
Xbcd706-3A locus 34.5 Wheat ABD - Wheat, Synthetic x Opata, update - Ta-Synthetic/Opata-update-3A Xbcd706-3A locus 74.3 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-3A Xbcd706-3A locus 41.5 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-3A Xbcd706-3A locus 51.1 () Automated name-based View Maps
Xmwg22-3A locus 34.6 Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-3A Xmwg22-3A locus 51.7 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, update - Ta-Synthetic/Opata-update-3A Xmwg22-3A locus 83.5 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-3A Xmwg22-3A locus 42.9 () Automated name-based View Maps
Xgpw4221-3A locus 45 No other positions
Xgpw3036-3A locus 45.7 No other positions
Xgpw8038-3A locus 46.4 No other positions
XksuG13-3A locus 46.6 No other positions
Xgpw2118-3A locus 47 No other positions
Xgpw3223-3A locus 47 No other positions
Xgwm30-3A locus 47 Wheat AB - T. turgidum, Omrabi5 x dicoccoides, QTL - Tt-Oxd-QTL-3A Xgwm30-3A locus 90.5 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, update - Ta-Synthetic/Opata-update-3A Xgwm30-3A locus 107.7 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-3A Xgwm30-3A locus 47.5 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-3A Xgwm30-3A locus 46.1 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-3A Xgwm30-3A locus 61.4 () Automated name-based View Maps
Xgpw2016-3A locus 47.5 No other positions
Xgwm5-3A locus 47.6 Wheat ABD - Wheat, Synthetic x Opata, update - Ta-Synthetic/Opata-update-3A Xgwm5-3A locus 176.4 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_3A Xgwm5-3A locus 0.21 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-3A Xgwm5-3A locus 44.9 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-3A Xgwm5-3A locus 47.95 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-3A Xgwm5-3A locus 58.9 () Automated name-based View Maps
Xgwm32-3A locus 48.3 Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_3A Xgwm32-3A locus 0.6 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-3A Xgwm32-3A locus 47.35 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, update - Ta-Synthetic/Opata-update-3A Xgwm32-3A locus 114.2 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-3A Xgwm32-3A locus 43.7 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-3A Xgwm32-3A locus 58.5 () Automated name-based View Maps

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.