*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Wheat ABD-Wheat, Synthetic x Opata, SSR
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Ta-Synthetic/Opata-SSR-3D
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
(Hide Advanced Menu)

Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Wheat ABD - Wheat, Synthetic x Opata, SSR [ View Map Set Info ]
Map Name: Ta-Synthetic/Opata-SSR-3D
Map Start: 0
Map Stop: 222.7
Features by Type:
31 locus
31 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 26 to 31 of 31.       Previous | of 2
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-3D
(Click headers to resort)		 Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
Xgwm71-3D locus 16.1 Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_3D Xgwm71-3D locus -0.12 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-3D Xgwm71-3D locus 15.8 () Automated name-based View Maps
Wheat ABD - Wheat, USG3209 x Jaypee - USG3209/Jaypee-3D Xgwm71-3D locus 14.7 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, update - Ta-Synthetic/Opata-update-3D Xgwm71-3D locus 26.3 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-3D Xgwm71-3D locus 7.7 () Automated name-based View Maps
Xgwm183-3D locus 32.3 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-3D Xgwm183-3D locus 28.5 () Automated name-based View Maps
Xgwm2-3D locus 57.35 Wheat ABD - Wheat, Synthetic x Opata, update - Ta-Synthetic/Opata-update-3D Xgwm2-3D locus 77.5 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-3D Xgwm2-3D locus 17.6 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-3D Xgwm2-3D locus 31 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_3D Xgwm2-3D locus -0.78 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-3D Xgwm2-3D locus 60.5 () Automated name-based View Maps
Xgwm497-3D locus 66.6 Wheat ABD - Wheat, Synthetic x Opata, update - Ta-Synthetic/Opata-update-3D Xgwm497-3D locus 100.9 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-3D Xgwm497-3D locus 74.6 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-3D Xgwm497-3D locus 28.9 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-3D Xgwm497-3D locus 46.2 () Automated name-based View Maps
Xgwm114-3D locus 219.95 Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_3D Xgwm114-3D locus -0.12 () Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-3D Xgwm114-3D locus 222 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-3D Xgwm114-3D locus 22.7 () Automated name-based View Maps
Xcdo459-3D locus 0 No other positions

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.