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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
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Map Set Wheat ABD-Wheat, Synthetic x Opata, SSR
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Wheat ABD - Wheat, Synthetic x Opata, SSR [ View Map Set Info ]
Map Name: Ta-Synthetic/Opata-SSR-5A
Map Start: 0
Map Stop: 178.8
Features by Type:
32 locus
32 Total

Map Features

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Items 26 to 32 of 32.       Previous | of 2
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-5A
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Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
Xgwm291-5A locus 178.4 Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-5A Xgwm291-5A locus 191.7 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-5A Xgwm291-5A locus 188.3 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-5A Xgwm291-5A locus 128.3 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides, SSR - Tturgidum-SSR-5A Xgwm291-5A locus 145.5 () Automated name-based View Maps
Wheat ABD - Wheat, WxM, FHB QTL - Triticum-WxM-FHB-QTL-5A Xgwm291-5A locus 180.2 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-5A Xgwm291-5A locus 164 () Automated name-based View Maps
Xgwm410-5A locus 178.8 Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-5A Xgwm410-5A locus 132.4 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-5A Xgwm410-5A locus 192.5 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-5A Xgwm410-5A locus 166.7 () Automated name-based View Maps
Xgwm639-5A locus 82.45 Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-5A Xgwm639-5A locus 76.4 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-5A Xgwm639-5A locus 53.8 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-5A Xgwm639-5A locus 74 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides, SSR - Tturgidum-SSR-5A Xgwm639-5A locus 48.3 () Automated name-based View Maps
Xgwm666-5A locus 105 Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-5A Xgwm666-5A locus 69.3 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides, SSR - Tturgidum-SSR-5A Xgwm666-5A locus 69.5 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_5A Xgwm666-5A locus 0.68 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-5A Xgwm666-5A locus 90.3 () Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-5A Xgwm666-5A locus 95.3 () Automated name-based View Maps
Xbcd1235-5A.1 locus 87.9 Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-5A Xbcd1235-5A.1 locus 60 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-5A Xbcd1235-5A.1 locus 58.3 () Automated name-based View Maps
Xgwm595-5A locus 178 Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-5A Xgwm595-5A locus 150.5 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-5A Xgwm595-5A locus 122.9 () Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-5A Xgwm595-5A locus 180.5 () Automated name-based View Maps
Xgwm617-5A locus 95.4 Wheat ABD - Wheat, WxM, FHB QTL - Triticum-WxM-FHB-QTL-5A Xgwm617-5A locus 94.4 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_5A Xgwm617-5A locus 0.68 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-5A Xgwm617-5A locus 76.3 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-5A Xgwm617-5A locus 57.6 () Automated name-based View Maps

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