*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Wheat ABD-Wheat, Synthetic x Opata, SSR
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Ta-Synthetic/Opata-SSR-5B
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Wheat ABD - Wheat, Synthetic x Opata, SSR [ View Map Set Info ]
Map Name: Ta-Synthetic/Opata-SSR-5B
Map Start: -5
Map Stop: 165.6
Features by Type:
34 locus
34 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 26 to 34 of 34.       Previous | of 2
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-5B
(Click headers to resort)
Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
Xgwm335-5B locus 37.2 Wheat AB - Durum wheat, Kofa x UC1113 - Kofa/UC1113-5B Xgwm335-5B locus 41.2 () Automated name-based View Maps
Wheat AB - T. turgidum, Omrabi5 x dicoccoides, QTL - Tt-Oxd-QTL-5B Xgwm335-5B locus 90.6 () Automated name-based View Maps
Wheat ABD - Wheat, P91193D1 x P92201D5 - P91193D1/P92201D5-5B Xgwm335-5B locus 86 () Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-5B Xgwm335-5B locus 36.1 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_5B Xgwm335-5B locus 0.42 () Automated name-based View Maps
Wheat ABD - Wheat, Louise x Penawawa - Louise/Penawawa-5B Xgwm335-5B locus 42.4 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-5B Xgwm335-5B locus 32.6 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-5B Xgwm335-5B locus 67.6 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-5B Xgwm335-5B locus 33 () Automated name-based View Maps
Xgwm213-5B locus 37.2 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-5B Xgwm213-5B locus 34.1 () Automated name-based View Maps
Wheat ABD - Wheat, Louise x Penawawa - Louise/Penawawa-5B Xgwm213-5B locus 42.1 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides, SSR - Tturgidum-SSR-5B Xgwm213-5B locus 13.3 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-5B Xgwm213-5B locus 67.9 () Automated name-based View Maps
Wheat ABD - Wheat_Yr79_2018 - Wheat_Yr79_2018-5BS Xgwm213-5B locus 43.4 (cM) Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-5B Xgwm213-5B locus 32.5 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_5B Xgwm213-5B locus 0.42 () Automated name-based View Maps
Xbcd1140-5B locus 58.8 Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-5B Xbcd1140-5B locus 47.8 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-5B Xbcd1140-5B locus 40.3 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-5B Xbcd1140-5B locus 42.6 () Automated name-based View Maps
Xgwm554-5B locus 81.55 Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-5B Xgwm554-5B locus 63.1 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides, SSR - Tturgidum-SSR-5B Xgwm554-5B locus 47.6 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_5B Xgwm554-5B locus 0.78 () Automated name-based View Maps
Wheat AB - T. turgidum, Omrabi5 x dicoccoides, QTL - Tt-Oxd-QTL-5B Xgwm554-5B locus 143 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-5B Xgwm554-5B locus 88.5 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-5B Xgwm554-5B locus 64 () Automated name-based View Maps
Xcdo504-5B locus 106.5 Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-5B Xcdo504-5B locus 84.7 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, Group 5 - Ta-Physical-Sarma-5B Xcdo504-5B locus 0.69 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-5B Xcdo504-5B locus 89 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-5B Xcdo504-5B locus 99.7 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides, AFLP - Tturgidum-MxM-AFLP-5B Xcdo504-5B locus 80.6 () Automated name-based View Maps
Xgwm544-5B locus 25.2 Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_5B Xgwm544-5B locus -0.64 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-5B Xgwm544-5B locus 61.2 () Automated name-based View Maps
Wheat ABD - Wheat, Louise x Penawawa - Louise/Penawawa-5B Xgwm544-5B locus 23.1 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-5B Xgwm544-5B locus 24 () Automated name-based View Maps
Xgwm639-5B locus 73.3 Wheat AB - T. turgidum, Omrabi5 x dicoccoides, QTL - Tt-Oxd-QTL-5B Xgwm639-5B locus 135.9 () Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-5B Xgwm639-5B locus 62 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_5B Xgwm639-5B locus 0.65 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-5B Xgwm639-5B locus 77.1 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-5B Xgwm639-5B locus 53.2 () Automated name-based View Maps
Wheat ABD - Wheat, P91193D1 x P92201D5 - P91193D1/P92201D5-5B Xgwm639-5B locus 136.1 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides, SSR - Tturgidum-SSR-5B Xgwm639-5B locus 39.7 () Automated name-based View Maps
Xabc310-5B locus 165.6 Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-5B Xabc310-5B locus 138.6 () Automated name-based View Maps
Xgwm443-5B locus 13.2 Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-5B Xgwm443-5B locus 31.6 () Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-5B Xgwm443-5B locus 8.1 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_5B Xgwm443-5B locus -0.22 () Automated name-based View Maps

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.