*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Wheat ABD-Wheat, Synthetic x Opata, SSR
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Ta-Synthetic/Opata-SSR-4A
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
(Hide Advanced Menu)

Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Wheat ABD - Wheat, Synthetic x Opata, SSR [ View Map Set Info ]
Map Name: Ta-Synthetic/Opata-SSR-4A
Map Start: 0.00
Map Stop: 102.05
Features by Type:
21 locus
21 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 21 of 21.
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-4A
(Click headers to resort)		 Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
Centromere-4A locus 15.20 - 19.00 Wheat AB - T. turgidum, JK x Cham1 - Tturgidum-JKxC-4A Centromere-4A locus 210.80 () Automated name-based View Maps
Wheat ABD - Wheat, Grandin x BR34 - Ta-Grandin/BR34-4A Centromere-4A locus 14.20 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR 2 - Ta-Synthetic/Opata-SSR2-4A Centromere-4A locus 42.70 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, gbx RFLP - Ta-Synthetic/Opata-gbx-4A Centromere-4A locus 27.30 () Automated name-based View Maps
Wheat AB - T. turgidum, Omrabi5 x dicoccoides, QTL - Tt-Oxd-QTL-4A Centromere-4A locus 39.40 () Automated name-based View Maps
Wheat ABD - Wheat, Forno x Oberkulmer - Triticum-FxO-4A Centromere-4A locus 38.00 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides, SSR - Tturgidum-SSR-4A Centromere-4A locus 0.00 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides, AFLP - Tturgidum-MxM-AFLP-4A Centromere-4A locus 9.20 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, DR Genes - Ta-Synthetic/Opata-DR-4A Centromere-4A locus 0.00 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides - Tturgidum-MxM-4A Centromere-4A locus 0.00 () Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-4A Centromere-4A locus 0.00 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, R Genes - Ta-Physical-RGenes-4A Centromere-4A locus 0.00 () Automated name-based View Maps
Xgwm160-4A locus 102.05 Wheat ABD - Wheat, Chinese Spring x SQ1 - CS/SQ1-4A Xgwm160-4A locus 45.20 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-4A Xgwm160-4A locus 77.10 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_4A Xgwm160-4A locus 0.90 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides, SSR - Tturgidum-SSR-4A Xgwm160-4A locus 123.80 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-4A Xgwm160-4A locus 78.90 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-4A Xgwm160-4A locus 115.50 () Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-4A Xgwm160-4A locus 105.70 () Automated name-based View Maps
Xgwm397-4A locus 45.50 Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-4A Xgwm397-4A locus 41.30 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-4A Xgwm397-4A locus 39.60 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-4A Xgwm397-4A locus 18.40 () Automated name-based View Maps
Wheat A - T. boeoticum x monococcum - T.b.xT.m.-4A Xgwm397-4A locus 3.30 () Automated name-based View Maps
Wheat ABD - Wheat, P91193D1 x P92201D5 - P91193D1/P92201D5-4A Xgwm397-4A locus 21.90 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_4A Xgwm397-4A locus 0.62 () Automated name-based View Maps
Wheat ABD - Wheat, Forno x Oberkulmer - Triticum-FxO-4A Xgwm397-4A locus 7.00 () Automated name-based View Maps
Wheat ABD - Wheat, Courtot x Chinese Spring, GPW - Ta-Courtot/CS-GPW-4A Xgwm397-4A locus -48.80 () Automated name-based View Maps
Wheat ABD - Wheat, Chinese Spring x SQ1 - CS/SQ1-4A Xgwm397-4A locus 134.80 () Automated name-based View Maps
Wheat ABD - Wheat, Conan x Reeder - Conan/Reeder-4A Xgwm397-4A locus 31.60 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides, SSR - Tturgidum-SSR-4A Xgwm397-4A locus 21.10 () Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-4A Xgwm397-4A locus 10.00 () Automated name-based View Maps
Xfba78-4A locus 0.00 Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-4A Xfba78-4A locus 14.50 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, DR Genes - Ta-Synthetic/Opata-DR-4A Xfba78-4A locus -13.10 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-4A Xfba78-4A locus 18.10 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-4A Xfba78-4A locus 9.70 () Automated name-based View Maps
XksuF8-4A locus 12.30 Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-4A XksuF8-4A locus 20.70 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR 2 - Ta-Synthetic/Opata-SSR2-4A XksuF8-4A locus 31.70 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-4A XksuF8-4A locus 24.40 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, DR Genes - Ta-Synthetic/Opata-DR-4A XksuF8-4A locus -5.10 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, gbx RFLP - Ta-Synthetic/Opata-gbx-4A XksuF8-4A locus 23.50 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-4A XksuF8-4A locus 19.20 () Automated name-based View Maps
Wheat ABD - Wheat, Gale - Ta-Gale-4A XksuF8-4A locus -5.70 () Automated name-based View Maps
Xwg622-4A locus 33.80 Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-4A Xwg622-4A locus 39.40 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-4A Xwg622-4A locus 39.90 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, gbx RFLP - Ta-Synthetic/Opata-gbx-4A Xwg622-4A locus 41.30 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-4A Xwg622-4A locus 38.40 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, DR Genes - Ta-Synthetic/Opata-DR-4A Xwg622-4A locus 18.60 () Automated name-based View Maps
Xmwg549-4A locus 73.10 Wheat ABD - Wheat, Synthetic x Opata, gbx RFLP - Ta-Synthetic/Opata-gbx-4A Xmwg549-4A locus 69.90 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, DR Genes - Ta-Synthetic/Opata-DR-4A Xmwg549-4A locus 70.60 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-4A Xmwg549-4A locus 66.50 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-4A Xmwg549-4A locus 58.40 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-4A Xmwg549-4A locus 100.60 () Automated name-based View Maps
Xbcd1670-4A locus 76.10 Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-4A Xbcd1670-4A locus 57.30 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-4A Xbcd1670-4A locus 70.90 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR 2 - Ta-Synthetic/Opata-SSR2-4A Xbcd1670-4A locus 110.00 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, DR Genes - Ta-Synthetic/Opata-DR-4A Xbcd1670-4A locus 75.00 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, gbx RFLP - Ta-Synthetic/Opata-gbx-4A Xbcd1670-4A locus 72.70 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-4A Xbcd1670-4A locus 102.40 () Automated name-based View Maps
Xcdo475-4A locus 82.30 Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-4A Xcdo475-4A locus 62.70 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-4A Xcdo475-4A locus 77.10 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-4A Xcdo475-4A locus 98.20 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, DR Genes - Ta-Synthetic/Opata-DR-4A Xcdo475-4A locus 81.20 () Automated name-based View Maps
XksuD9-4A locus 87.10 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-4A XksuD9-4A locus 108.80 () Automated name-based View Maps
Wheat ABD - Wheat, Gale - Ta-Gale-4A XksuD9-4A locus 80.40 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-4A XksuD9-4A locus 64.70 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, DR Genes - Ta-Synthetic/Opata-DR-4A XksuD9-4A locus 86.00 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-4A XksuD9-4A locus 81.90 () Automated name-based View Maps
Xbcd130-4A locus 90.60 Wheat ABD - Wheat, Synthetic x Opata, DR Genes - Ta-Synthetic/Opata-DR-4A Xbcd130-4A locus 89.50 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-4A Xbcd130-4A locus 110.60 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-4A Xbcd130-4A locus 66.30 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-4A Xbcd130-4A locus 85.40 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, gbx RFLP - Ta-Synthetic/Opata-gbx-4A Xbcd130-4A locus 83.00 () Automated name-based View Maps
Xfba231-4A locus 93.50 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-4A Xfba231-4A locus 110.50 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, DR Genes - Ta-Synthetic/Opata-DR-4A Xfba231-4A locus 90.90 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-4A Xfba231-4A locus 88.10 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-4A Xfba231-4A locus 66.50 () Automated name-based View Maps
Xcdo545-4A locus 101.60 Wheat ABD - Wheat, Synthetic x Opata, gbx RFLP - Ta-Synthetic/Opata-gbx-4A Xcdo545-4A locus 91.90 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-4A Xcdo545-4A locus 75.70 () Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-4A Xcdo545-4A locus 87.60 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, DR Genes - Ta-Synthetic/Opata-DR-4A Xcdo545-4A locus 101.40 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-4A Xcdo545-4A locus 120.00 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR 2 - Ta-Synthetic/Opata-SSR2-4A Xcdo545-4A locus 136.10 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-4A Xcdo545-4A locus 99.50 () Automated name-based View Maps
Xgwm610-4A locus 27.85 Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-4A Xgwm610-4A locus 30.40 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides, SSR - Tturgidum-SSR-4A Xgwm610-4A locus 12.90 () Automated name-based View Maps
Wheat AB - T. turgidum, Omrabi5 x dicoccoides, QTL - Tt-Oxd-QTL-4A Xgwm610-4A locus 61.00 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_4A Xgwm610-4A locus -0.10 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-4A Xgwm610-4A locus 12.10 () Automated name-based View Maps
Wheat ABD - Wheat, Courtot x Chinese Spring, GPW - Ta-Courtot/CS-GPW-4A Xgwm610-4A locus -42.70 () Automated name-based View Maps
Xgwm165-4A locus 12.20 Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-4A Xgwm165-4A locus 17.90 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-4A Xgwm165-4A locus 2.40 () Automated name-based View Maps
Wheat AB - Durum wheat, Kofa x UC1113 - Kofa/UC1113-4A Xgwm165-4A locus 0.00 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_4A Xgwm165-4A locus -0.88 () Automated name-based View Maps
Wheat AB - T. turgidum, Omrabi5 x dicoccoides, QTL - Tt-Oxd-QTL-4A Xgwm165-4A locus 0.00 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-4A Xgwm165-4A locus 19.40 () Automated name-based View Maps
Wheat ABD - Wheat, Courtot x Chinese Spring, GPW - Ta-Courtot/CS-GPW-4A Xgwm165-4A locus 34.10 () Automated name-based View Maps
Xgwm192-4A locus 3.00 Wheat ABD - Wheat, Courtot x Chinese Spring, GPW - Ta-Courtot/CS-GPW-4A Xgwm192-4A locus 34.30 () Automated name-based View Maps
Wheat AB - Durum wheat, Kofa x UC1113 - Kofa/UC1113-4A Xgwm192-4A locus 2.30 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-4A Xgwm192-4A locus 17.50 () Automated name-based View Maps
Xgwm4-4A locus 11.80 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-4A Xgwm4-4A locus 17.10 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-4A Xgwm4-4A locus 16.10 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-4A Xgwm4-4A locus 0.00 () Automated name-based View Maps
Xfba320-4A locus 6.00 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-4A Xfba320-4A locus 20.70 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-4A Xfba320-4A locus 14.80 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-4A Xfba320-4A locus 20.90 () Automated name-based View Maps
Xbcd402-4A locus 21.90 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-4A Xbcd402-4A locus 20.90 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-4A Xbcd402-4A locus 31.20 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-4A Xbcd402-4A locus 28.30 () Automated name-based View Maps
Xgwm637-4A locus 57.20 Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-4A Xgwm637-4A locus 45.00 () Automated name-based View Maps
Wheat AB - T. turgidum, JK x Cham1, 2 - Tturgidum-JKxC2-4A Xgwm637-4A locus 381.90 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_4A Xgwm637-4A locus 0.62 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-4A Xgwm637-4A locus 63.30 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides, SSR - Tturgidum-SSR-4A Xgwm637-4A locus 48.00 () Automated name-based View Maps
Wheat AB - T. turgidum, JK x Cham1 - Tturgidum-JKxC-4A Xgwm637-4A locus 225.20 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-4A Xgwm637-4A locus 36.50 () Automated name-based View Maps
Xgwm601-4A locus 12.00 Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_4A Xgwm601-4A locus 0.22 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-4A Xgwm601-4A locus 8.90 () Automated name-based View Maps
Wheat AB - T. turgidum, Omrabi5 x dicoccoides, QTL - Tt-Oxd-QTL-4A Xgwm601-4A locus 32.40 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-4A Xgwm601-4A locus 23.00 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides, SSR - Tturgidum-SSR-4A Xgwm601-4A locus 3.20 () Automated name-based View Maps

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.