*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Wheat ABD-Wheat, Synthetic x Opata, SSR 2
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Ta-Synthetic/Opata-SSR2-2B
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Wheat ABD - Wheat, Synthetic x Opata, SSR 2 [ View Map Set Info ]
Map Name: Ta-Synthetic/Opata-SSR2-2B
Map Start: 0
Map Stop: 195.7
Features by Type:
21 locus
21 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 21 of 21.
Wheat ABD - Wheat, Synthetic x Opata, SSR 2 - Ta-Synthetic/Opata-SSR2-2B
(Click headers to resort)
Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
Xwmc257-2B locus 38.7 Wheat ABD - Wheat, Chinese Spring x SQ1 - CS/SQ1-2B Xwmc257-2B locus 37.7 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-2B Xwmc257-2B locus 39.1 () Automated name-based View Maps
Xbcd1184-2B locus 63.2 Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-2B Xbcd1184-2B locus 14.9 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, gbx RFLP - Ta-Synthetic/Opata-gbx-2B Xbcd1184-2B locus 19.1 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, DR Genes - Ta-Synthetic/Opata-DR-2B Xbcd1184-2B locus -63.2 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-2B Xbcd1184-2B locus 21.9 () Automated name-based View Maps
Xrz444-2B locus 75.3 Wheat AB - T. turgidum, JK x Cham1, 2 - Tturgidum-JKxC2-2B Xrz444-2B locus 35.2 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-2B Xrz444-2B locus 38.8 () Automated name-based View Maps
Wheat AB - T. turgidum, JK x Cham1 - Tturgidum-JKxC-2B Xrz444-2B locus 63.2 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-2B Xrz444-2B locus 34.6 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-2B Xrz444-2B locus 74.5 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-2B Xrz444-2B locus 13.5 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, DR Genes - Ta-Synthetic/Opata-DR-2B Xrz444-2B locus -39.7 () Automated name-based View Maps
Xcdo405-2B locus 96.9 Wheat AB - T. turgidum, JK x Cham1 - Tturgidum-JKxC-2B Xcdo405-2B locus 127.4 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-2B Xcdo405-2B locus 93.1 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-2B Xcdo405-2B locus 58.3 () Automated name-based View Maps
Wheat AB - T. turgidum, JK x Cham1, 2 - Tturgidum-JKxC2-2B Xcdo405-2B locus 128.3 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-2B Xcdo405-2B locus 52.1 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-2B Xcdo405-2B locus 25.9 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, DR Genes - Ta-Synthetic/Opata-DR-2B Xcdo405-2B locus -15.2 () Automated name-based View Maps
Centromere-2B locus 112.6 Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-2B Centromere-2B locus 104 () Automated name-based View Maps
Wheat AB - Durum wheat, Svevo x Ciccio - Svevo/Ciccio-2B Centromere-2B locus 103 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-2B Centromere-2B locus 107.2 - 111 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, R Genes - Ta-Physical-RGenes-2B Centromere-2B locus 0 () Automated name-based View Maps
Wheat AB - T. turgidum, JK x Cham1 - Tturgidum-JKxC-2B Centromere-2B locus 139.6 () Automated name-based View Maps
Wheat AB - T. turgidum, Omrabi5 x dicoccoides, QTL - Tt-Oxd-QTL-2B Centromere-2B locus 110.5 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides, SSR - Tturgidum-SSR-2B Centromere-2B locus 0 () Automated name-based View Maps
Wheat ABD - Wheat, Forno x Oberkulmer - Triticum-FxO-2B Centromere-2B locus 100 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, DR Genes - Ta-Synthetic/Opata-DR-2B Centromere-2B locus 0 () Automated name-based View Maps
Wheat ABD - Wheat, Grandin x BR34 - Ta-Grandin/BR34-2B Centromere-2B locus 96.4 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides - Tturgidum-MxM-2B Centromere-2B locus 0 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, gbx RFLP - Ta-Synthetic/Opata-gbx-2B Centromere-2B locus 78 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides, AFLP - Tturgidum-MxM-AFLP-2B Centromere-2B locus 84.9 () Automated name-based View Maps
Xbcd1119-2B locus 116.1 Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-2B Xbcd1119-2B locus 116.8 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-2B Xbcd1119-2B locus 66.8 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-2B Xbcd1119-2B locus 41.3 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, DR Genes - Ta-Synthetic/Opata-DR-2B Xbcd1119-2B locus 7.4 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-2B Xbcd1119-2B locus 80.9 () Automated name-based View Maps
Xbcd1779-2B locus 128.1 Wheat ABD - Wheat, Synthetic x Opata, gbx RFLP - Ta-Synthetic/Opata-gbx-2B Xbcd1779-2B locus 114.5 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, DR Genes - Ta-Synthetic/Opata-DR-2B Xbcd1779-2B locus 28.7 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-2B Xbcd1779-2B locus 102.2 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-2B Xbcd1779-2B locus 78.4 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-2B Xbcd1779-2B locus 51.9 () Automated name-based View Maps
Xmwg546-2B locus 149.8 Wheat ABD - Wheat, Synthetic x Opata, DR Genes - Ta-Synthetic/Opata-DR-2B Xmwg546-2B locus 56.9 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-2B Xmwg546-2B locus 101.2 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-2B Xmwg546-2B locus 157.3 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, gbx RFLP - Ta-Synthetic/Opata-gbx-2B Xmwg546-2B locus 135.5 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-2B Xmwg546-2B locus 129.8 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-2B Xmwg546-2B locus 69.9 () Automated name-based View Maps
Xwmc175-2B locus 130.6 Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-2B Xwmc175-2B locus 86.7 () Automated name-based View Maps
Wheat ABD - Wheat, USG3209 x Jaypee - USG3209/Jaypee-2B Xwmc175-2B locus 169.7 () Automated name-based View Maps
Wheat ABD - Wheat, Courtot x Chinese Spring, GPW - Ta-Courtot/CS-GPW-2B Xwmc175-2B locus 96.2 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_2B Xwmc175-2B locus 0.7 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-2B Xwmc175-2B locus 84.1 () Automated name-based View Maps
Xbcd348-2B locus 0 Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-2B Xbcd348-2B locus 0 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-2B Xbcd348-2B locus -50 () Automated name-based View Maps
Xcdo447-2B locus 6.9 Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-2B Xcdo447-2B locus 9.6 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-2B Xcdo447-2B locus -43.2 () Automated name-based View Maps
Xfbb274-2B locus 30.9 Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-2B Xfbb274-2B locus 0 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-2B Xfbb274-2B locus 0 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, gbx RFLP - Ta-Synthetic/Opata-gbx-2B Xfbb274-2B locus 0 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-2B Xfbb274-2B locus 0 () Automated name-based View Maps
Xwmc25-2B locus 38.7 Wheat ABD - Wheat, P91193D1 x P92201D5 - P91193D1/P92201D5-2B Xwmc25-2B locus 88.2 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-2B Xwmc25-2B locus 25 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-2B Xwmc25-2B locus 8.7 () Automated name-based View Maps
Xwmc154-2B locus 84.7 Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-2B Xwmc154-2B locus 28.5 () Automated name-based View Maps
Wheat AB - Durum wheat, Kofa x UC1113 - Kofa/UC1113-2B Xwmc154-2B locus 0 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-2B Xwmc154-2B locus 41.5 () Automated name-based View Maps
Xwmc272-2B locus 106.6 Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-2B Xwmc272-2B locus 56.6 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-2B Xwmc272-2B locus 59.3 () Automated name-based View Maps
Xwmc265-2B locus 109.6 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-2B Xwmc265-2B locus 62.2 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-2B Xwmc265-2B locus 61.7 () Automated name-based View Maps
Xfbb113-2B locus 168.4 Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-2B Xfbb113-2B locus 138.6 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-2B Xfbb113-2B locus 119.6 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-2B Xfbb113-2B locus 72.2 () Automated name-based View Maps
Xcmwg660-2B locus 182.3 Wheat ABD - Wheat, Synthetic x Opata, gbx RFLP - Ta-Synthetic/Opata-gbx-2B Xcmwg660-2B locus 160.7 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-2B Xcmwg660-2B locus 133.5 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-2B Xcmwg660-2B locus 153.8 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-2B Xcmwg660-2B locus 199.9 () Automated name-based View Maps
Xwmc243-2B locus 37.2 Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-2B Xwmc243-2B locus 30 () Automated name-based View Maps
Wheat ABD - Wheat, Louise x Penawawa - Louise/Penawawa-2B Xwmc243-2B locus 113.5 () Automated name-based View Maps
Xwmc213-2B locus 77.9 Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-2B Xwmc213-2B locus 34.5 () Automated name-based View Maps
XksuD3-2B locus 195.7 No other positions

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.