*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Wheat ABD-Wheat, Synthetic x Opata, SSR 2
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Ta-Synthetic/Opata-SSR2-4D
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Wheat ABD - Wheat, Synthetic x Opata, SSR 2 [ View Map Set Info ]
Map Name: Ta-Synthetic/Opata-SSR2-4D
Map Start: 0
Map Stop: 77.8
Features by Type:
11 locus
11 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 11 of 11.
Wheat ABD - Wheat, Synthetic x Opata, SSR 2 - Ta-Synthetic/Opata-SSR2-4D
(Click headers to resort)
Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
Xwmc331-4D locus 24.9 Wheat ABD - Wheat, P91193D1 x P92201D5 - P91193D1/P92201D5-4D Xwmc331-4D locus 0 () Automated name-based View Maps
Wheat ABD - Wheat, Conan x Reeder - Conan/Reeder-4D Xwmc331-4D locus 221 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-4D Xwmc331-4D locus 42.9 () Automated name-based View Maps
Wheat ABD - Wheat, Louise x Penawawa - Louise/Penawawa-4D Xwmc331-4D locus 27.6 () Automated name-based View Maps
Xbcd265-4D locus 0 Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-4D Xbcd265-4D locus 30.9 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, gbx RFLP - Ta-Synthetic/Opata-gbx-4D Xbcd265-4D locus 42.2 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-4D Xbcd265-4D locus 0 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, DR Genes - Ta-Synthetic/Opata-DR-4D Xbcd265-4D locus -10 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR-D - Ta-Synthetic/Opata-SSR_D-4D Xbcd265-4D locus 33.2 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-4D Xbcd265-4D locus 42.2 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-4D Xbcd265-4D locus 32 () Automated name-based View Maps
Centromere-4D locus 13.5 Wheat ABD - Wheat, Synthetic x Opata, DR Genes - Ta-Synthetic/Opata-DR-4D Centromere-4D locus 0 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-4D Centromere-4D locus 40.6 - 44.4 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR-D - Ta-Synthetic/Opata-SSR_D-4D Centromere-4D locus 45 () Automated name-based View Maps
Wheat ABD - Wheat, Grandin x BR34 - Ta-Grandin/BR34-4D Centromere-4D locus 29.5 () Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-4D Centromere-4D locus 0 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, R Genes - Ta-Physical-RGenes-4D Centromere-4D locus 0 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, gbx RFLP - Ta-Synthetic/Opata-gbx-4D Centromere-4D locus 53 () Automated name-based View Maps
XksuF8-4D locus 15.7 Wheat ABD - Wheat, Synthetic x Opata, DR Genes - Ta-Synthetic/Opata-DR-4D XksuF8-4D locus 2.5 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-4D XksuF8-4D locus 43.8 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR-D - Ta-Synthetic/Opata-SSR_D-4D XksuF8-4D locus 48 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-4D XksuF8-4D locus 14 () Automated name-based View Maps
Wheat ABD - Wheat, Gale - Ta-Gale-4D XksuF8-4D locus 5.7 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-4D XksuF8-4D locus 54.7 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-4D XksuF8-4D locus 44.4 () Automated name-based View Maps
Xfbb178-4D locus 30.9 Wheat ABD - Wheat, Synthetic x Opata, DR Genes - Ta-Synthetic/Opata-DR-4D Xfbb178-4D locus 18 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR-D - Ta-Synthetic/Opata-SSR_D-4D Xfbb178-4D locus 63.9 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-4D Xfbb178-4D locus 58.9 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-4D Xfbb178-4D locus 76.1 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-4D Xfbb178-4D locus 62.6 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-4D Xfbb178-4D locus 31.4 () Automated name-based View Maps
Xcdo1312-4D locus 40.6 Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-4D Xcdo1312-4D locus 64.4 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR-D - Ta-Synthetic/Opata-SSR_D-4D Xcdo1312-4D locus 72.1 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, DR Genes - Ta-Synthetic/Opata-DR-4D Xcdo1312-4D locus 26.1 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, gbx RFLP - Ta-Synthetic/Opata-gbx-4D Xcdo1312-4D locus 80.6 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-4D Xcdo1312-4D locus 73 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-4D Xcdo1312-4D locus 41.4 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-4D Xcdo1312-4D locus 84.1 () Automated name-based View Maps
Xbcd1431-4D locus 52 Wheat ABD - Wheat, Synthetic x Opata, DR Genes - Ta-Synthetic/Opata-DR-4D Xbcd1431-4D locus 37.2 () Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-4D Xbcd1431-4D locus 25.2 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-4D Xbcd1431-4D locus 86.1 () Automated name-based View Maps
Xfba177-4D locus 77.8 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-4D Xfba177-4D locus 78.7 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-4D Xfba177-4D locus 121.8 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-4D Xfba177-4D locus 112.8 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, DR Genes - Ta-Synthetic/Opata-DR-4D Xfba177-4D locus 63.8 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR-D - Ta-Synthetic/Opata-SSR_D-4D Xfba177-4D locus 112 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-4D Xfba177-4D locus 98.1 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, gbx RFLP - Ta-Synthetic/Opata-gbx-4D Xfba177-4D locus 115.7 () Automated name-based View Maps
Xwmc48-4D locus 9.6 Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-4D Xwmc48-4D locus 28.3 () Automated name-based View Maps
Wheat ABD - Wheat_Yr79_2018 - Wheat_Yr79_2018-4DS Xwmc48-4D locus 7.9 (cM) Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-4D Xwmc48-4D locus 4.4 () Automated name-based View Maps
Xfbb226-4D locus 65.9 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-4D Xfbb226-4D locus 66.8 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-4D Xfbb226-4D locus 90 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-4D Xfbb226-4D locus 112.9 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-4D Xfbb226-4D locus 100 () Automated name-based View Maps
Xwmc52-4D locus 12.5 Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-4D Xwmc52-4D locus 31 () Automated name-based View Maps

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.