*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Wheat ABD-Wheat, Synthetic x Opata, SSR 2
(Reference Set)
Wheat AB-T. turgidum, Messapia x dicoccoides
Min.
Correspondences
Align Vertically
Stack
Maps Ta-Synthetic/Opata-SSR2-5A Tturgidum-MxM-5A
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Wheat ABD - Wheat, Synthetic x Opata, SSR 2 [ View Map Set Info ]
Map Name: Ta-Synthetic/Opata-SSR2-5A
Map Start: 0.00
Map Stop: 201.30
Features by Type:
18 locus
18 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 18 of 18.
Wheat ABD - Wheat, Synthetic x Opata, SSR 2 - Ta-Synthetic/Opata-SSR2-5A
(Click headers to resort)
Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
Xwmc327-5A locus 113.20 Wheat ABD - Wheat, Louise x Penawawa - Louise/Penawawa-5A Xwmc327-5A locus 0.00 () Automated name-based View Maps
Wheat ABD - Wheat, Chinese Spring x SQ1 - CS/SQ1-5A Xwmc327-5A locus 91.60 () Automated name-based View Maps
Xbcd1871-5A locus 37.10 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-5A Xbcd1871-5A locus 38.00 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-5A Xbcd1871-5A locus 13.90 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, DR Genes - Ta-Synthetic/Opata-DR-5A Xbcd1871-5A locus -9.80 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-5A Xbcd1871-5A locus 0.00 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-5A Xbcd1871-5A locus 20.30 () Automated name-based View Maps
Centromere-5A locus 60.80 Wheat ABD - Wheat, Synthetic x Opata, gbx RFLP - Ta-Synthetic/Opata-gbx-5A Centromere-5A locus 15.00 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, DR Genes - Ta-Synthetic/Opata-DR-5A Centromere-5A locus 0.00 () Automated name-based View Maps
Wheat AB - T. turgidum, JK x Cham1 - Tturgidum-JKxC-5A Centromere-5A locus 33.10 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides, SSR - Tturgidum-SSR-5A Centromere-5A locus 0.00 () Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-5A Centromere-5A locus 20.00 () Automated name-based View Maps
Wheat ABD - Wheat, Forno x Oberkulmer - Triticum-FxO-5A Centromere-5A locus 91.00 () Automated name-based View Maps
Wheat ABD - Wheat, Grandin x BR34 - Ta-Grandin/BR34-5A Centromere-5A locus 36.20 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides - Tturgidum-MxM-5A Centromere-5A locus 0.00 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, R Genes - Ta-Physical-RGenes-5A Centromere-5A locus 0.00 () Automated name-based View Maps
Wheat ABD - 5A, DS 5AIran - 5A, DS 5AIran Centromere-5A locus 35.20 () Automated name-based View Maps
Wheat AB - Durum wheat, Svevo x Ciccio - Svevo/Ciccio-5A Centromere-5A locus 13.10 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-5A Centromere-5A locus 25.30 - 29.10 () Automated name-based View Maps
Wheat AB - T. turgidum, Omrabi5 x dicoccoides, QTL - Tt-Oxd-QTL-5A Centromere-5A locus 47.80 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides, AFLP - Tturgidum-MxM-AFLP-5A Centromere-5A locus 120.40 () Automated name-based View Maps
Wheat ABD - Wheat, WxM, FHB QTL - Triticum-WxM-FHB-QTL-5A Centromere-5A locus 46.00 () Automated name-based View Maps
Xbcd1355-5A locus 72.30 Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-5A Xbcd1355-5A locus 23.20 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-5A Xbcd1355-5A locus 37.40 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-5A Xbcd1355-5A locus 43.20 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-5A Xbcd1355-5A locus 59.30 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, DR Genes - Ta-Synthetic/Opata-DR-5A Xbcd1355-5A locus 13.10 () Automated name-based View Maps
Xcdo1090-5A locus 85.20 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-5A Xcdo1090-5A locus 74.10 () Automated name-based View Maps
Wheat AB - T. turgidum, JK x Cham1 - Tturgidum-JKxC-5A Xcdo1090-5A locus 38.10 () Automated name-based View Maps
Wheat AB - T. turgidum, JK x Cham1, 2 - Tturgidum-JKxC2-5A Xcdo1090-5A locus 18.60 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-5A Xcdo1090-5A locus 48.00 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, DR Genes - Ta-Synthetic/Opata-DR-5A Xcdo1090-5A locus 33.70 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-5A Xcdo1090-5A locus 37.80 () Automated name-based View Maps
Xbcd1235-5A locus 106.00 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-5A Xbcd1235-5A locus 157.50 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, DR Genes - Ta-Synthetic/Opata-DR-5A Xbcd1235-5A locus 56.30 () Automated name-based View Maps
Xbcd183-5A locus 122.10 Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-5A Xbcd183-5A locus 73.00 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-5A Xbcd183-5A locus 68.30 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, DR Genes - Ta-Synthetic/Opata-DR-5A Xbcd183-5A locus 71.20 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-5A Xbcd183-5A locus 105.40 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-5A Xbcd183-5A locus 102.90 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, gbx RFLP - Ta-Synthetic/Opata-gbx-5A Xbcd183-5A locus 67.80 () Automated name-based View Maps
Xrz395-5A locus 143.20 Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-5A Xrz395-5A locus 122.10 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, DR Genes - Ta-Synthetic/Opata-DR-5A Xrz395-5A locus 89.50 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-5A Xrz395-5A locus 76.70 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-5A Xrz395-5A locus 90.80 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-5A Xrz395-5A locus 126.80 () Automated name-based View Maps
Xfba351-5A locus 157.80 Wheat ABD - Wheat, Synthetic x Opata, DR Genes - Ta-Synthetic/Opata-DR-5A Xfba351-5A locus 106.10 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-5A Xfba351-5A locus 106.10 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, gbx RFLP - Ta-Synthetic/Opata-gbx-5A Xfba351-5A locus 105.40 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-5A Xfba351-5A locus 141.40 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-5A Xfba351-5A locus 91.20 () Automated name-based View Maps
Xmwg2112-5A locus 201.30 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-5A Xmwg2112-5A locus 184.90 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, gbx RFLP - Ta-Synthetic/Opata-gbx-5A Xmwg2112-5A locus 146.20 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, DR Genes - Ta-Synthetic/Opata-DR-5A Xmwg2112-5A locus 143.00 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-5A Xmwg2112-5A locus 127.00 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-5A Xmwg2112-5A locus 175.10 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-5A Xmwg2112-5A locus 143.00 () Automated name-based View Maps
Xpsr170-5A locus 0.00 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-5A Xpsr170-5A locus 0.00 () Automated name-based View Maps
Wheat ABD - Wheat, Gale - Ta-Gale-5A Xpsr170-5A locus -32.10 () Automated name-based View Maps
XgbxR665-5A locus 10.40 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-5A XgbxR665-5A locus 9.80 () Automated name-based View Maps
Xgwm154-5A locus 21.30 Wheat A - T. boeoticum x monococcum - T.b.xT.m.-5A Xgwm154-5A locus 64.30 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-5A Xgwm154-5A locus 4.10 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_5A Xgwm154-5A locus -0.86 () Automated name-based View Maps
Wheat ABD - Wheat, WxM, FHB QTL - Triticum-WxM-FHB-QTL-5A Xgwm154-5A locus 28.00 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-5A Xgwm154-5A locus 10.35 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-5A Xgwm154-5A locus 22.20 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-5A Xgwm154-5A locus 34.30 () Automated name-based View Maps
XgbxG625-5A locus 28.90 Wheat ABD - Wheat, Synthetic x Opata, gbx RFLP - Ta-Synthetic/Opata-gbx-5A XgbxG625-5A locus 0.00 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-5A XgbxG625-5A locus 29.50 () Automated name-based View Maps
Xwmc96-5A locus 48.80 Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-5A Xwmc96-5A locus 99.20 () Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-5A Xwmc96-5A locus 33.40 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-5A Xwmc96-5A locus 45.10 () Automated name-based View Maps
Xcdo457-5A locus 172.80 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-5A Xcdo457-5A locus 156.40 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-5A Xcdo457-5A locus 115.70 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-5A Xcdo457-5A locus 105.30 () Automated name-based View Maps
Xwg114-5A locus 181.70 Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-5A Xwg114-5A locus 159.20 () Automated name-based View Maps
Wheat ABD - 5A, DS 5AIran - 5A, DS 5AIran Xwg114-5A locus 186.30 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-5A Xwg114-5A locus 135.60 () Automated name-based View Maps
Wheat ABD - 5AL, CS q deletions, physical - 5AL, q deletions Xwg114-5A locus 90.50 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-5A Xwg114-5A locus 113.90 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-5A Xwg114-5A locus 165.30 () Automated name-based View Maps
Xwmc215-5A locus 88.90 No other positions

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.