*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Wheat ABD-Wheat, Synthetic x Opata, gbx RFLP
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Ta-Synthetic/Opata-gbx-2A
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Wheat ABD - Wheat, Synthetic x Opata, gbx RFLP [ View Map Set Info ]
Map Name: Ta-Synthetic/Opata-gbx-2A
Map Start: 0
Map Stop: 159.9
Features by Type:
19 locus
19 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 19 of 19.
Wheat ABD - Wheat, Synthetic x Opata, gbx RFLP - Ta-Synthetic/Opata-gbx-2A
(Click headers to resort)
Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
Xcdo447-2A locus 6.8 Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-2A Xcdo447-2A locus 8.2 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-2A Xcdo447-2A locus 9.6 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, DR Genes - Ta-Synthetic/Opata-DR-2A Xcdo447-2A locus -135.1 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-2A Xcdo447-2A locus 6.8 () Automated name-based View Maps
Xfbb329-2A locus 68.6 Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-2A Xfbb329-2A locus 63.2 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-2A Xfbb329-2A locus 49.2 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-2A Xfbb329-2A locus 76.7 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-2A Xfbb329-2A locus 82.6 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, DR Genes - Ta-Synthetic/Opata-DR-2A Xfbb329-2A locus -60.9 () Automated name-based View Maps
Centromere-2A locus 96 Wheat AB - T. turgidum, Omrabi5 x dicoccoides, QTL - Tt-Oxd-QTL-2A Centromere-2A locus 242.4 () Automated name-based View Maps
Wheat ABD - Wheat, 2006, purple grain - Wheat_Novo67xPurpleFeed_2006-2A Centromere-2A locus 27.9 (cM) Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides, AFLP - Tturgidum-MxM-AFLP-2A Centromere-2A locus 83.3 () Automated name-based View Maps
Wheat AB - Durum Wheat, Anthocyanin, 2010 - Tdurum_TRI15744xTRI2719-2A Centromere-2A locus 20.6 (cM) Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides, SSR - Tturgidum-SSR-2A Centromere-2A locus 0 () Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-2A Centromere-2A locus 105 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, R Genes - Ta-Physical-RGenes-2A Centromere-2A locus 0 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, DR Genes - Ta-Synthetic/Opata-DR-2A Centromere-2A locus 0 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-2A Centromere-2A locus 97 - 100.8 () Automated name-based View Maps
Wheat AB - T. turgidum, JK x Cham1 - Tturgidum-JKxC-2A Centromere-2A locus 0 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides - Tturgidum-MxM-2A Centromere-2A locus 0 () Automated name-based View Maps
Wheat ABD - Wheat, Forno x Oberkulmer - Triticum-FxO-2A Centromere-2A locus 85 () Automated name-based View Maps
Wheat ABD - Wheat, 2006, purple grain - Wheat_Novo67xPurple_2006-2A Centromere-2A locus 10 (cM) Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR 2 - Ta-Synthetic/Opata-SSR2-2A Centromere-2A locus 82.2 () Automated name-based View Maps
Xbcd543-2A locus 110.4 Wheat ABD - Wheat, Synthetic x Opata, DR Genes - Ta-Synthetic/Opata-DR-2A Xbcd543-2A locus 4.7 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-2A Xbcd543-2A locus 104 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-2A Xbcd543-2A locus 85.5 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR 2 - Ta-Synthetic/Opata-SSR2-2A Xbcd543-2A locus 93.9 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-2A Xbcd543-2A locus 131.7 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-2A Xbcd543-2A locus 119.4 () Automated name-based View Maps
XksuE16-2A locus 119.6 Wheat ABD - Wheat, Synthetic x Opata, DR Genes - Ta-Synthetic/Opata-DR-2A XksuE16-2A locus 15.5 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-2A XksuE16-2A locus 113.2 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-2A XksuE16-2A locus 131.2 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-2A XksuE16-2A locus 139.9 () Automated name-based View Maps
Xpsr934-2A locus 140.3 Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-2A Xpsr934-2A locus 123.7 () Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-2A Xpsr934-2A locus 186.3 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, DR Genes - Ta-Synthetic/Opata-DR-2A Xpsr934-2A locus 35.2 () Automated name-based View Maps
Wheat ABD - Wheat, Gale - Ta-Gale-2A Xpsr934-2A locus 40.3 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-2A Xpsr934-2A locus 158 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-2A Xpsr934-2A locus 146.1 () Automated name-based View Maps
Xcdo678-2A locus 144.5 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-2A Xcdo678-2A locus 149.2 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-2A Xcdo678-2A locus 166.7 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-2A Xcdo678-2A locus 106.7 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-2A Xcdo678-2A locus 127.9 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, DR Genes - Ta-Synthetic/Opata-DR-2A Xcdo678-2A locus 40.3 () Automated name-based View Maps
Xcdo456-2A.2 locus 26.7 Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-2A Xcdo456-2A.2 locus 26.6 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-2A Xcdo456-2A.2 locus 29.4 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-2A Xcdo456-2A.2 locus 28.9 () Automated name-based View Maps
Xfba314-2A locus 159.9 Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-2A Xfba314-2A locus 120.1 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-2A Xfba314-2A locus 163.9 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-2A Xfba314-2A locus 186.3 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR 2 - Ta-Synthetic/Opata-SSR2-2A Xfba314-2A locus 142.7 () Automated name-based View Maps
Xbcd348-2A.1 locus 0 Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-2A Xbcd348-2A.1 locus 0 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-2A Xbcd348-2A.1 locus 0 () Automated name-based View Maps
Xgbx3818-2A locus 45.5 No other positions
Xgbx3832-2A locus 80 No other positions
Xgbx4986-2A locus 100.6 No other positions
XgbxG036-2A locus 59.5 No other positions
XgbxG214-2A locus 124.5 No other positions
XgbxG281-2A locus 49.5 No other positions
XgbxG303-2A locus 150.1 No other positions
XgbxG542-2A locus 91 No other positions
XgbxG747-2A locus 41.6 No other positions

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.