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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
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Map Set Wheat ABD-Wheat, Synthetic x Opata, gbx RFLP
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Wheat ABD - Wheat, Synthetic x Opata, gbx RFLP [ View Map Set Info ]
Map Name: Ta-Synthetic/Opata-gbx-3D
Map Start: 0
Map Stop: 159.8
Features by Type:
16 locus
16 Total

Map Features

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Items 1 to 16 of 16.
Wheat ABD - Wheat, Synthetic x Opata, gbx RFLP - Ta-Synthetic/Opata-gbx-3D
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Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
Xcdo549-3D locus 0 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-3D Xcdo549-3D locus 0 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, update - Ta-Synthetic/Opata-update-3D Xcdo549-3D locus 0 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR-D - Ta-Synthetic/Opata-SSR_D-3D Xcdo549-3D locus 0 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR 2 - Ta-Synthetic/Opata-SSR2-3D Xcdo549-3D locus 0 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-3D Xcdo549-3D locus 0 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-3D Xcdo549-3D locus 21.8 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, DR Genes - Ta-Synthetic/Opata-DR-3D Xcdo549-3D locus -77 () Automated name-based View Maps
Xfbb370-3D locus 12 Wheat ABD - Wheat, Synthetic x Opata, DR Genes - Ta-Synthetic/Opata-DR-3D Xfbb370-3D locus -65.3 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-3D Xfbb370-3D locus 8.4 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-3D Xfbb370-3D locus 12.7 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-3D Xfbb370-3D locus 11.6 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, update - Ta-Synthetic/Opata-update-3D Xfbb370-3D locus 29 () Automated name-based View Maps
Xbcd1532-3D locus 48.9 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-3D Xbcd1532-3D locus 58.2 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-3D Xbcd1532-3D locus 47.8 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-3D Xbcd1532-3D locus 32.4 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, update - Ta-Synthetic/Opata-update-3D Xbcd1532-3D locus 66.2 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, DR Genes - Ta-Synthetic/Opata-DR-3D Xbcd1532-3D locus -29.7 () Automated name-based View Maps
XksuA6-3D locus 56.8 Wheat ABD - Wheat, Synthetic x Opata, DR Genes - Ta-Synthetic/Opata-DR-3D XksuA6-3D locus -14.9 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-3D XksuA6-3D locus 56.4 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-3D XksuA6-3D locus 62.6 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR-D - Ta-Synthetic/Opata-SSR_D-3D XksuA6-3D locus 70.6 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, update - Ta-Synthetic/Opata-update-3D XksuA6-3D locus 80.7 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-3D XksuA6-3D locus 29.4 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-3D XksuA6-3D locus 57.7 () Automated name-based View Maps
Centromere-3D locus 72 Wheat ABD - Wheat, Synthetic x Opata, update - Ta-Synthetic/Opata-update-3D Centromere-3D locus 80.7 - 97.2 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, R Genes - Ta-Physical-RGenes-3D Centromere-3D locus 0 () Automated name-based View Maps
Wheat ABD - Wheat, Sphaerococcoid Genes - Ta-Sphaerococcoid-3D Centromere-3D locus 58 - 69.9 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-3D Centromere-3D locus 69.8 - 73.6 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR-D - Ta-Synthetic/Opata-SSR_D-3D Centromere-3D locus 86.1 () Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-3D Centromere-3D locus 62 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, DR Genes - Ta-Synthetic/Opata-DR-3D Centromere-3D locus 0 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR 2 - Ta-Synthetic/Opata-SSR2-3D Centromere-3D locus 71.3 () Automated name-based View Maps
Xbcd134-3D locus 76.2 Wheat ABD - Wheat, Synthetic x Opata, update - Ta-Synthetic/Opata-update-3D Xbcd134-3D locus 111.7 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-3D Xbcd134-3D locus 82.6 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-3D Xbcd134-3D locus 78.6 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-3D Xbcd134-3D locus 76.9 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-3D Xbcd134-3D locus 40.9 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR-D - Ta-Synthetic/Opata-SSR_D-3D Xbcd134-3D locus 95.5 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, DR Genes - Ta-Synthetic/Opata-DR-3D Xbcd134-3D locus 5.1 () Automated name-based View Maps
Xbcd288-3D locus 95.5 Wheat ABD - Wheat, Synthetic x Opata, SSR-D - Ta-Synthetic/Opata-SSR_D-3D Xbcd288-3D locus 109.6 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-3D Xbcd288-3D locus 54 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-3D Xbcd288-3D locus 96.3 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, DR Genes - Ta-Synthetic/Opata-DR-3D Xbcd288-3D locus 18.8 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, update - Ta-Synthetic/Opata-update-3D Xbcd288-3D locus 141.3 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-3D Xbcd288-3D locus 90.6 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-3D Xbcd288-3D locus 90.9 () Automated name-based View Maps
XksuH15-3D locus 120.7 Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-3D XksuH15-3D locus 126.8 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-3D XksuH15-3D locus 120.3 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, update - Ta-Synthetic/Opata-update-3D XksuH15-3D locus 204.2 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR-D - Ta-Synthetic/Opata-SSR_D-3D XksuH15-3D locus 136.9 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, DR Genes - Ta-Synthetic/Opata-DR-3D XksuH15-3D locus 49.5 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-3D XksuH15-3D locus 70.4 () Automated name-based View Maps
Xfbb316-3D locus 133.6 Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-3D Xfbb316-3D locus 142.5 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-3D Xfbb316-3D locus 79.3 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, DR Genes - Ta-Synthetic/Opata-DR-3D Xfbb316-3D locus 63 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-3D Xfbb316-3D locus 128.1 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, update - Ta-Synthetic/Opata-update-3D Xfbb316-3D locus 229.6 () Automated name-based View Maps
XksuG59-3D locus 159.8 Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-3D XksuG59-3D locus 163.9 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR-D - Ta-Synthetic/Opata-SSR_D-3D XksuG59-3D locus 180.4 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-3D XksuG59-3D locus 171.3 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, update - Ta-Synthetic/Opata-update-3D XksuG59-3D locus 297.5 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, DR Genes - Ta-Synthetic/Opata-DR-3D XksuG59-3D locus 104.6 () Automated name-based View Maps
Xfba091-3D locus 35.9 Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-3D Xfba091-3D locus 33.8 () Automated name-based View Maps
Xgbx3864-3D locus 117 Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-3D Xgbx3864-3D locus 66.8 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, update - Ta-Synthetic/Opata-update-3D Xgbx3864-3D locus 177.6 () Automated name-based View Maps
XgbxR187-3D locus 107.8 Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-3D XgbxR187-3D locus 54.9 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, update - Ta-Synthetic/Opata-update-3D XgbxR187-3D locus 155.7 () Automated name-based View Maps
XgbxG265-3D locus 21 Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-3D XgbxG265-3D locus 6.7 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, update - Ta-Synthetic/Opata-update-3D XgbxG265-3D locus 26.3 () Automated name-based View Maps
XgbxG305-3D locus 85.9 Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-3D XgbxG305-3D locus 49.9 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, update - Ta-Synthetic/Opata-update-3D XgbxG305-3D locus 120.1 () Automated name-based View Maps
XgbxG542-3D locus 133.6 No other positions

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