*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Wheat ABD-Wheat, USG3209 x Jaypee
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps USG3209/Jaypee-1B
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
locus
qtl
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Wheat ABD - Wheat, USG3209 x Jaypee [ View Map Set Info ]
Map Name: USG3209/Jaypee-1B
Map Start: 0
Map Stop: 215
Features by Type:
14 locus
2 qtl
16 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 16 of 16.
Wheat ABD - Wheat, USG3209 x Jaypee - USG3209/Jaypee-1B
(Click headers to resort)
Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
Xgwm153-1B locus 116.5 Wheat ABD - Wheat, Conan x Reeder - Conan/Reeder-1B Xgwm153-1B locus 70.68 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-1B Xgwm153-1B locus 56.6 () Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-1B Xgwm153-1B locus 111.1 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_1B Xgwm153-1B locus 0.84 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-1B Xgwm153-1B locus 91.2 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides, SSR - Tturgidum-SSR-1B Xgwm153-1B locus 85.6 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-1B Xgwm153-1B locus 97.5 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-1B Xgwm153-1B locus 61.4 () Automated name-based View Maps
XwPt4129-1B locus 73.1 Wheat ABD - Wheat, Conan x Reeder - Conan/Reeder-1B XwPt4129-1B locus 88.45 () Automated name-based View Maps
XwPt3475-1B locus 74.7 Wheat ABD - Wheat, Conan x Reeder - Conan/Reeder-1B XwPt3475-1B locus 88.45 () Automated name-based View Maps
XwPt4532-1B locus 73.2 Wheat ABD - Wheat, Conan x Reeder - Conan/Reeder-1B XwPt4532-1B locus 88.45 () Automated name-based View Maps
Xgwm259-1B locus 191.2 Wheat AB - T. turgidum, Messapia x dicoccoides, SSR - Tturgidum-SSR-1B Xgwm259-1B locus 115.1 () Automated name-based View Maps
Wheat ABD - Wheat, Courtot x Chinese Spring, GPW - Ta-Courtot/CS-GPW-1B Xgwm259-1B locus 144.7 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-1B Xgwm259-1B locus 142.3 () Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-1B Xgwm259-1B locus 171 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_1B Xgwm259-1B locus 0.92 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-1B Xgwm259-1B locus 93 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-1B Xgwm259-1B locus 145.15 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-1B Xgwm259-1B locus 106.8 () Automated name-based View Maps
Xgwm273-1B locus 45.6 Wheat AB - T. turgidum, Messapia x dicoccoides, SSR - Tturgidum-SSR-1B Xgwm273-1B locus -2.3 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-1B Xgwm273-1B locus 38.5 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-1B Xgwm273-1B locus 34 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-1B Xgwm273-1B locus 33.4 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-1B Xgwm273-1B locus 31.5 () Automated name-based View Maps
Wheat AB - Durum wheat, Kofa x UC1113 - Kofa/UC1113-1B Xgwm273-1B locus 34.4 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_1B Xgwm273-1B locus -0.25 () Automated name-based View Maps
Xwmc728-1B locus 200.6 Wheat AB - Durum wheat, Kofa x UC1113 - Kofa/UC1113-1B Xwmc728-1B locus 144.4 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-1B Xwmc728-1B locus 109.5 () Automated name-based View Maps
Xbarc80-1B locus 215 Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_1B Xbarc80-1B locus 0.92 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-1B Xbarc80-1B locus 103.9 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-1B Xbarc80-1B locus 106.3 () Automated name-based View Maps
Wheat AB - Durum wheat, Kofa x UC1113 - Kofa/UC1113-1B Xbarc80-1B locus 144.4 () Automated name-based View Maps
Xbarc128-1B locus 0 Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-1B Xbarc128-1B locus 19.5 () Automated name-based View Maps
Xgwm364-1B locus 18 No other positions
Xscm9-1B locus 34 No other positions
Xbarc137-1B locus 49.2 Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-1B Xbarc137-1B locus 34.3 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-1B Xbarc137-1B locus 34.3 () Automated name-based View Maps
Xbarc188-1B.1 locus 131.7 No other positions
Xbarc188-1B.2 locus 134.2 No other positions
QPm.vag-1B qtl 34 - 45.6 No other positions
QLr.vag-1B qtl 73.2 - 74.7 No other positions

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.