*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Wheat ABD-Wheat, WxM, FHB QTL
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Triticum-WxM-FHB-QTL-5A
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
locus
qtl
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Wheat ABD - Wheat, WxM, FHB QTL [ View Map Set Info ]
Map Name: Triticum-WxM-FHB-QTL-5A
Map Start: 0
Map Stop: 180.2
Features by Type:
12 locus
1 qtl
13 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 13 of 13.
Wheat ABD - Wheat, WxM, FHB QTL - Triticum-WxM-FHB-QTL-5A
(Click headers to resort)
Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
Xgwm129-5A locus 0 Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-5A Xgwm129-5A locus 20.5 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-5A Xgwm129-5A locus 9.95 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-5A Xgwm129-5A locus 54.8 () Automated name-based View Maps
Wheat ABD - Wheat, Chinese Spring x SQ1 - CS/SQ1-5A Xgwm129-5A locus 29 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_5A Xgwm129-5A locus -0.2 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-5A Xgwm129-5A locus 43.1 () Automated name-based View Maps
(Break2) locus 119.4 Wheat ABD - Wheat, USG3209 x Jaypee - USG3209/Jaypee-6B (Break2) locus 136 () Automated name-based View Maps
Wheat ABD - Wheat, Kyoto - Ta-Kyoto-2B (Break2) locus 185 () Automated name-based View Maps
Wheat ABD - Wheat, Kyoto - Ta-Kyoto-5D (Break2) locus 68 () Automated name-based View Maps
Wheat AB - Durum wheat, Svevo x Ciccio - Svevo/Ciccio-1A (Break2) locus 159.8 () Automated name-based View Maps
Wheat ABD - Wheat, Kyoto - Ta-Kyoto-5A (Break2) locus 123 () Automated name-based View Maps
Wheat ABD - Wheat, Conan x Reeder - Conan/Reeder-2A (Break2) locus 201 () Automated name-based View Maps
Wheat ABD - Wheat, Kyoto - Ta-Kyoto-7A (Break2) locus 53 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides, AFLP - Tturgidum-MxM-AFLP-2A (Break2) locus 139.2 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides, AFLP - Tturgidum-MxM-AFLP-3B (Break2) locus 115.9 () Automated name-based View Maps
Wheat ABD - Wheat genes - Triticum-Genes-5D (Break2) locus 42.8 () Automated name-based View Maps
Wheat ABD - Wheat, Kyoto - Ta-Kyoto-4A (Break2) locus 168 () Automated name-based View Maps
Wheat ABD - Wheat genes - Triticum-Genes-4B (Break2) locus 42 () Automated name-based View Maps
Wheat ABD - Wheat, Sphaerococcoid Genes - Ta-Sphaerococcoid-3D (Break2) locus 143 () Automated name-based View Maps
Wheat A - T. boeoticum x monococcum - T.b.xT.m.-7A (Break2) locus 278.9 () Automated name-based View Maps
Wheat ABD - Wheat genes - Triticum-Genes-2A (Break2) locus 32.1 () Automated name-based View Maps
Barley - Barley, Lx41 - Hordeum-Lx41-2H (Break2) locus 178 () Automated name-based View Maps
Wheat ABD - Wheat genes - Triticum-Genes-2D (Break2) locus 23.9 () Automated name-based View Maps
Wheat AB - T. turgidum, Omrabi5 x dicoccoides, QTL - Tt-Oxd-QTL-2A (Break2) locus 117.6 () Automated name-based View Maps
Wheat ABD - Wheat, Kyoto - Ta-Kyoto-6B (Break2) locus 86 () Automated name-based View Maps
Wheat ABD - Wheat, Conan x Reeder - Conan/Reeder-4D (Break2) locus 196 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR 2 - Ta-Synthetic/Opata-SSR2-7B (Break2) locus 160.8 () Automated name-based View Maps
Wheat ABD - Wheat, WxM, FHB QTL - Triticum-WxM-FHB-QTL-2D (Break2) locus 140 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides, AFLP - Tturgidum-MxM-AFLP-7A (Break2) locus 43.1 () Automated name-based View Maps
Barley - Barley, FxS, FHB QTL - Hordeum-FxS-FHB-QTL-5H (Break2) locus 109.6 () Automated name-based View Maps
Wheat ABD - Wheat genes - Triticum-Genes-6D (Break2) locus 56.3 () Automated name-based View Maps
Wheat ABD - Wheat, Conan x Reeder - Conan/Reeder-7D (Break2) locus 128 () Automated name-based View Maps
Wheat AB - T. turgidum, Omrabi5 x dicoccoides, QTL - Tt-Oxd-QTL-4B (Break2) locus 255.2 () Automated name-based View Maps
Wheat ABD - Wheat, Kyoto - Ta-Kyoto-6A (Break2) locus 155 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides, SSR - Tturgidum-SSR-7A (Break2) locus -46.7 () Automated name-based View Maps
Wheat ABD - Wheat, Conan x Reeder - Conan/Reeder-1B (Break2) locus 199 () Automated name-based View Maps
Wheat ABD - Wheat, Conan x Reeder - Conan/Reeder-5B (Break2) locus 248 () Automated name-based View Maps
Wheat ABD - Wheat, Sphaerococcoid Genes - Ta-Sphaerococcoid-3B (Break2) locus 173 () Automated name-based View Maps
Wheat AB - Durum wheat, Svevo x Ciccio - Svevo/Ciccio-3B (Break2) locus 157.6 () Automated name-based View Maps
Wheat ABD - Wheat, Conan x Reeder - Conan/Reeder-3D (Break2) locus 170 () Automated name-based View Maps
Centromere-5A locus 46 Wheat ABD - 5A, DS 5AIran - 5A, DS 5AIran Centromere-5A locus 35.2 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR 2 - Ta-Synthetic/Opata-SSR2-5A Centromere-5A locus 60.8 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, gbx RFLP - Ta-Synthetic/Opata-gbx-5A Centromere-5A locus 15 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides, SSR - Tturgidum-SSR-5A Centromere-5A locus 0 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides, AFLP - Tturgidum-MxM-AFLP-5A Centromere-5A locus 120.4 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, R Genes - Ta-Physical-RGenes-5A Centromere-5A locus 0 () Automated name-based View Maps
Wheat AB - T. turgidum, JK x Cham1 - Tturgidum-JKxC-5A Centromere-5A locus 33.1 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, DR Genes - Ta-Synthetic/Opata-DR-5A Centromere-5A locus 0 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides - Tturgidum-MxM-5A Centromere-5A locus 0 () Automated name-based View Maps
Wheat AB - Durum wheat, Svevo x Ciccio - Svevo/Ciccio-5A Centromere-5A locus 13.1 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-5A Centromere-5A locus 25.3 - 29.1 () Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-5A Centromere-5A locus 20 () Automated name-based View Maps
Wheat AB - T. turgidum, Omrabi5 x dicoccoides, QTL - Tt-Oxd-QTL-5A Centromere-5A locus 47.8 () Automated name-based View Maps
Wheat ABD - Wheat, Forno x Oberkulmer - Triticum-FxO-5A Centromere-5A locus 91 () Automated name-based View Maps
Wheat ABD - Wheat, Grandin x BR34 - Ta-Grandin/BR34-5A Centromere-5A locus 36.2 () Automated name-based View Maps
Xgdm109-5A locus 41.4 Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-5A Xgdm109-5A locus 34 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_5A Xgdm109-5A locus 0.18 () Automated name-based View Maps
Xgwm205-5A locus 44.4 Wheat A - T. boeoticum x monococcum - T.b.xT.m.-5A Xgwm205-5A locus 60.6 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-5A Xgwm205-5A locus 10.15 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-5A Xgwm205-5A locus 22.2 () Automated name-based View Maps
Wheat ABD - Wheat, P91193D1 x P92201D5 - P91193D1/P92201D5-5A Xgwm205-5A locus 38.9 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-5A Xgwm205-5A locus 5.9 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_5A Xgwm205-5A locus -0.86 () Automated name-based View Maps
Wheat ABD - Wheat, Louise x Penawawa - Louise/Penawawa-5A Xgwm205-5A locus 118 () Automated name-based View Maps
Wheat ABD - Wheat, Courtot x Chinese Spring, GPW - Ta-Courtot/CS-GPW-5A Xgwm205-5A locus 27.2 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-5A Xgwm205-5A locus 32.8 () Automated name-based View Maps
Xgwm154-5A locus 28 Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-5A Xgwm154-5A locus 4.1 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_5A Xgwm154-5A locus -0.86 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR 2 - Ta-Synthetic/Opata-SSR2-5A Xgwm154-5A locus 21.3 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-5A Xgwm154-5A locus 10.35 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-5A Xgwm154-5A locus 34.3 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-5A Xgwm154-5A locus 22.2 () Automated name-based View Maps
Wheat A - T. boeoticum x monococcum - T.b.xT.m.-5A Xgwm154-5A locus 64.3 () Automated name-based View Maps
Xgwm291-5A locus 180.2 Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-5A Xgwm291-5A locus 164 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-5A Xgwm291-5A locus 128.3 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-5A Xgwm291-5A locus 178.4 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides, SSR - Tturgidum-SSR-5A Xgwm291-5A locus 145.5 () Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-5A Xgwm291-5A locus 191.7 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-5A Xgwm291-5A locus 188.3 () Automated name-based View Maps
Xgwm617-5A locus 94.4 Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-5A Xgwm617-5A locus 76.3 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_5A Xgwm617-5A locus 0.68 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-5A Xgwm617-5A locus 95.4 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-5A Xgwm617-5A locus 57.6 () Automated name-based View Maps
(Break1) locus 69.4 Barley - Barley, FxS, FHB QTL - Hordeum-FxS-FHB-QTL-5H (Break1) locus 36.4 () Automated name-based View Maps
Wheat ABD - Wheat, Sphaerococcoid Genes - Ta-Sphaerococcoid-3B (Break1) locus 25 () Automated name-based View Maps
Wheat ABD - Wheat, Sphaerococcoid Genes - Ta-Sphaerococcoid-3D (Break1) locus 25 () Automated name-based View Maps
Wheat AB - T. turgidum, Omrabi5 x dicoccoides, QTL - Tt-Oxd-QTL-4B (Break1) locus 25 () Automated name-based View Maps
Wheat AB - Durum wheat, Svevo x Ciccio - Svevo/Ciccio-3B (Break1) locus 40.4 () Automated name-based View Maps
Wheat ABD - Wheat, WxM, FHB QTL - Triticum-WxM-FHB-QTL-2D (Break1) locus 28 () Automated name-based View Maps
Wheat AB - Durum wheat, Svevo x Ciccio - Svevo/Ciccio-1A (Break1) locus 56.4 () Automated name-based View Maps
Wheat AB - T. turgidum, Omrabi5 x dicoccoides, QTL - Tt-Oxd-QTL-2A (Break1) locus 62 () Automated name-based View Maps
Wheat A - T. boeoticum x monococcum - T.b.xT.m.-7A (Break1) locus 217.1 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR 2 - Ta-Synthetic/Opata-SSR2-7B (Break1) locus 107.2 () Automated name-based View Maps
Xwmc150-5A locus 7.5 Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-5A Xwmc150-5A locus 56.7 () Automated name-based View Maps
Wheat A - T. boeoticum x monococcum - T.b.xT.m.-5A Xwmc150-5A locus 18.7 () Automated name-based View Maps
Xgwm96-5A locus 14.9 Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-5A Xgwm96-5A locus 66.4 () Automated name-based View Maps
Xwmc126-5A locus 144.4 No other positions
QDon.crc-5A qtl 0 - 28 No other positions

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.