*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Wheat ABD-Wheat_Yr79_2018
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Wheat_Yr79_2018-4DS
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
locus
qtl
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Wheat ABD - Wheat_Yr79_2018 [ View Map Set Info ]
Map Name: Wheat_Yr79_2018-4DS
Map Start: 0 cM
Map Stop: 23.2 cM
Features by Type:
23 locus
1 qtl
24 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 24 of 24.
Wheat ABD - Wheat_Yr79_2018 - Wheat_Yr79_2018-4DS
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
QyrPI182103.wgp-4DL qtl 14.4 - 17.7 No other positions
barc334-4D locus 23.2 Wheat ABD - Wheat, Yr Update, 2021 - Wheat_Yr_2021-4D barc334-4D locus 67.26 (cM) Automated name-based View Maps
barc334 locus 23.2 Wheat ABD - Wheat, Composite, 2004 - Wheat-Composite2004-4D Xbarc334 locus 65 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 4D barc334 locus 39.5 () Automated name-based View Maps
Wheat ABD - Wheat_Consensus_2014_Ug99_Rust - Wheat_Consensus_2014_Ug99_Rust_3 barc334 locus 91.23 () Automated name-based View Maps
Xbarc334-4D locus 23.2 Wheat ABD - Wheat, Louise x Penawawa - Louise/Penawawa-4D Xbarc334-4D locus 5.6 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-4D Xbarc334-4D locus 41.8 () Automated name-based View Maps
Xbarc334 locus 23.2 Wheat ABD - Wheat, Composite, 2004 - Wheat-Composite2004-4D Xbarc334 locus 65 () Automated name-based View Maps
Wheat ABD - Wheat, UC1110 x PI610750 - Wheat, UC1110 x PI610750 4D Xbarc334 locus 63.8 () Automated name-based View Maps
Wheat ABD - Wheat, UC1110 x PI610750 - Wheat, UC1110 x PI610750 4D Xbarc334 locus 63.5 () Automated name-based View Maps
BS00182791 locus 17.7 No other positions
wsnp_Ex_c49005_53739745 locus 17.7 Wheat ABD - Wheat-2018-NAM26-Berkut-x-PI185715 - Wheat-2018-NAM26-BxPI185715_4D wsnp_Ex_c49005_53739745 locus 1.5 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM12-Berkut-x-CItr11223 - Wheat-2018-NAM12-BxCItr11223_4D wsnp_Ex_c49005_53739745 locus 8.7 () Automated name-based View Maps
IWA4044 locus 17.7 Wheat ABD - Wheat, 2013 9K Consensus - Wheat, 2013 9K Consensus 4D IWA4044 locus 26.91 () Automated name-based View Maps
Wheat ABD - Wheat, Yr Update, 2021 - Wheat_Yr_2021-4D IWA4044 locus 82.04 (cM) Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 4D IWA4044 locus 48.1 () Automated name-based View Maps
barc288-4D locus 14.4 Wheat ABD - Wheat, Klein Proteo x Klein Chaja - KPxKC-4D barc288-4D locus 22.3 () Automated name-based View Maps
barc288 locus 14.4 Wheat ABD - Wheat, Composite, 2004 - Wheat-Composite2004-4D Xbarc288 locus 63 () Automated name-based View Maps
Wheat ABD - Wheat, Yr Update, 2021 - Wheat_Yr_2021-4D barc288 locus 59.81 (cM) Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 4D barc288 locus 35.1 () Automated name-based View Maps
Xbarc288-4D locus 14.4 Wheat ABD - Wheat, Louise x Penawawa - Louise/Penawawa-4D Xbarc288-4D locus 7.5 () Automated name-based View Maps
Wheat ABD - Wheat, USG3209 x Jaypee - USG3209/Jaypee-4D Xbarc288-4D locus 41.8 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-4D Xbarc288-4D locus 38.9 () Automated name-based View Maps
Xbarc288 locus 14.4 Wheat ABD - Wheat, Composite, 2004 - Wheat-Composite2004-4D Xbarc288 locus 63 () Automated name-based View Maps
BS00184468 locus 10.9 No other positions
wsnp_JD_rep_c51623_35119179 locus 10.9 Wheat ABD - Wheat-2018-NAM10-Berkut-x-PI9791 - Wheat-2018-NAM10-BxPI9791_4D wsnp_JD_rep_c51623_35119179 locus 2.3 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM1-Berkut-x-DharwarDry - Wheat-2018-NAM1-BxDharwarDry_4D wsnp_JD_rep_c51623_35119179 locus 181.9 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM11-Berkut-x-CItr4175 - Wheat-2018-NAM11-BxCItr4175_4D wsnp_JD_rep_c51623_35119179 locus 47.9 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM29-Berkut-x-PI220431 - Wheat-2018-NAM29-BxPI220431_4D wsnp_JD_rep_c51623_35119179 locus 59.4 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM3-Berkut-x-PI283147 - Wheat-2018-NAM3-BxPI283147_4D wsnp_JD_rep_c51623_35119179 locus 0.7 () Automated name-based View Maps
Wheat ABD - Wheat_2014_90KSNP - Wheat_2014_90KSNP_4D IWA6277 locus 105.07 () Automated name-based View Maps
iwa6277-4D locus 10.9 Wheat ABD - Wheat, Klein Proteo x Klein Chaja - KPxKC-4D iwa6277-4D locus 21.7 () Automated name-based View Maps
IWA6277 locus 10.9 Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 4D IWA6277 locus 61.7 () Automated name-based View Maps
Wheat ABD - Wheat, Yr Update, 2021 - Wheat_Yr_2021-4D IWA6277 locus 105.07 (cM) Automated name-based View Maps
Wheat ABD - Wheat_2014_90KSNP - Wheat_2014_90KSNP_4D IWA6277 locus 105.07 () Automated name-based View Maps
Wheat ABD - Wheat, 2013 9K Consensus - Wheat, 2013 9K Consensus 4D IWA6277 locus 20.64 () Automated name-based View Maps
Wheat ABD - Wheat, NSGC Yr - Wheat, NSGC Yr 4D IWA6277 locus 20.64 () Automated name-based View Maps
Wheat ABD - Wheat, Klein Proteo x Klein Chaja - KPxKC-4D iwa6277-4D locus 21.7 () Automated name-based View Maps
wmc48 locus 7.9 Wheat AB - Durum Wheat, NSGC Lr - Durum Wheat, NSGC Lr 4B wmc48 locus 46.1 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 4D wmc48 locus 34 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 4A wmc48 locus 27 () Automated name-based View Maps
Wheat ABD - Wheat, Composite, 2004 - Wheat-Composite2004-4A Xwmc48c locus 54 () Automated name-based View Maps
Wheat ABD - Wheat_Consensus_2014_Ug99_Rust - Wheat_Consensus_2014_Ug99_Rust_4 wmc48 locus 21.97 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 4B wmc48 locus 37.3 () Automated name-based View Maps
wmc48-4D locus 7.9 Wheat ABD - Wheat, Yr Update, 2021 - Wheat_Yr_2021-4D wmc48-4D locus 57.87 (cM) Automated name-based View Maps
Xwmc48.2-4D locus 7.9 Wheat ABD - Wheat, P91193D1 x P92201D5 - P91193D1/P92201D5-4D Xwmc48.2-4D locus 36 () Automated name-based View Maps
Xwmc48-4D locus 7.9 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-4D Xwmc48-4D locus 4.4 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR 2 - Ta-Synthetic/Opata-SSR2-4D Xwmc48-4D locus 9.6 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-4D Xwmc48-4D locus 28.3 () Automated name-based View Maps
Xwmc48 locus 7.9 Wheat ABD - Wheat, Nanda2419 x Wangshuibai - Ta-NxW-4B Xwmc48 locus 23.9 () Automated name-based View Maps
Wheat ABD - Wheat, Finch x Eltan - Wheat, Finch x Eltan 4B Xwmc48 locus 0 () Automated name-based View Maps
Wheat AB - Durum wheat, Svevo x Ciccio - Svevo/Ciccio-4B Xwmc48 locus 124.7 () Automated name-based View Maps
BS00183664 locus 0 No other positions
wsnp_Ex_rep_c107564_91144523 locus 0 Wheat ABD - Wheat-2018-NAM9-Berkut-x-Vida - Wheat-2018-NAM9-BxVida_4D wsnp_Ex_rep_c107564_91144523 locus 0.7 () Automated name-based View Maps
Wheat ABD - Wheat_2014_90KSNP - Wheat_2014_90KSNP_4D IWA5156 locus 70.59 () Automated name-based View Maps
IWA5156 locus 0 Wheat ABD - Wheat, Yr Update, 2021 - Wheat_Yr_2021-4D IWA5156 locus 70.59 (cM) Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 4D IWA5156 locus 41.4 () Automated name-based View Maps
Wheat ABD - Wheat_2014_90KSNP - Wheat_2014_90KSNP_4D IWA5156 locus 70.59 () Automated name-based View Maps
Wheat ABD - Wheat, 2013 9K Consensus - Wheat, 2013 9K Consensus 4D IWA5156 locus 0.51 () Automated name-based View Maps

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.