*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Wheat ABD-Wheat_YrH922_2019
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Wheat_YrH922_2019_exp
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
(Hide Advanced Menu)

Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Wheat ABD - Wheat_YrH922_2019 [ View Map Set Info ]
Map Name: Wheat_YrH922_2019_exp
Map Start: 0 cM
Map Stop: 44.8 cM
Features by Type:
36 locus
36 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 36.       of 2 | Next
Wheat ABD - Wheat_YrH922_2019 - Wheat_YrH922_2019_exp
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
Xbarc77 locus 0 Wheat ABD - Wheat, CIMMYT Integrated - CIMMYT-integrated-3B Xbarc77 locus 82.77 () Automated name-based View Maps
Xbarc77-3B locus 0 Wheat ABD - Wheat, Chinese Spring x SQ1 - CS/SQ1-3B Xbarc77-3B locus 177.7 () Automated name-based View Maps
Wheat ABD - Wheat, Grandin x BR34 - Ta-Grandin/BR34-3B Xbarc77-3B locus 232.1 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-3B Xbarc77-3B locus 108.8 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-3B Xbarc77-3B locus 111.2 () Automated name-based View Maps
Wheat ABD - Wheat, Conan x Reeder - Conan/Reeder-3B Xbarc77-3B locus 199.65 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_3B Xbarc77-3B locus 0.11 () Automated name-based View Maps
barc77 locus 0 Wheat ABD - Wheat, Chinese Spring x SQ1 - CS/SQ1-3B Xbarc77-3B locus 177.7 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 3B barc77 locus 82.3 () Automated name-based View Maps
Wheat ABD - Wheat-2014-Consensus-Ug99-Update - Wheat-2014-Consensus-Ug99-Update barc77 locus 121.35 () Automated name-based View Maps
Wheat ABD - 3B Physical - Physical-3B barc77 locus 132.2 () Automated name-based View Maps
Wheat AB - Durum Wheat, NSGC Lr - Durum Wheat, NSGC Lr 3B barc77 locus 175.7 () Automated name-based View Maps
Wheat ABD - Wheat, Yr Update, 2021 - Wheat_Yr_2021-3B barc77 locus 175.69 (cM) Automated name-based View Maps
Wheat ABD - Wheat_Consensus_2014_Ug99_Rust - Wheat_Consensus_2014_Ug99_Rust_3 barc77 locus 121.35 () Automated name-based View Maps
barc77-3B locus 0 Wheat AB - Wheat_AB_2015_Consensus - Wheat_AB_2015_Consensus-3B barc77-3B locus 175.7 () Automated name-based View Maps
Wheat AB - Wheat_AB, Meridiano x Claudio - Wheat_AB, Meridiano x Claudio 3B barc77-3B locus 32.6 () Automated name-based View Maps
BE517914 locus 4.1 Wheat D - Aegilops_tauschii_D_genome_2013 - Aegilops_tauschii_2013_3D BE517914 locus 101.55 () Automated name-based View Maps
IWA344 locus 4.1 Wheat AB - Wheat_AB, Ben x PI41025 - Wheat_AB, Ben x PI41025 3B IWA344 locus 85.1 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, 2013 9K Consensus - Wheat, 2013 9K Consensus 3B IWA344 locus 95.5 () Automated name-based View Maps
Wheat AB - Wheat_AB_2015_Consensus - Wheat_AB_2015_Consensus-3B IWA344 locus 104.6 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 3B IWA344 locus 50.2 () Automated name-based View Maps
Wheat AB - Durum Wheat, NSGC Lr - Durum Wheat, NSGC Lr 3B IWA344 locus 104.6 () Automated name-based View Maps
Wheat ABD - Wheat, Yr Update, 2021 - Wheat_Yr_2021-3B IWA344 locus 107.07 (cM) Automated name-based View Maps
Wheat ABD - Wheat, Klein Proteo x Klein Chaja - KPxKC-3B iwa344-3B locus 80.4 () Automated name-based View Maps
Wheat ABD - Wheat_2014_90KSNP - Wheat_2014_90KSNP_3B IWA344 locus 74.26 () Automated name-based View Maps
iwa344-3B locus 4.1 Wheat ABD - Wheat, Klein Proteo x Klein Chaja - KPxKC-3B iwa344-3B locus 80.4 () Automated name-based View Maps
BS00180099 locus 4.1 No other positions
wsnp_BE517914B_Ta_2_5 locus 4.1 Wheat ABD - Wheat-2018-NAM7-Berkut-x-PI565213 - Wheat-2018-NAM7-BxPI565213_3B wsnp_BE517914B_Ta_2_5 locus 83.4 () Automated name-based View Maps
Wheat ABD - Wheat_2014_90KSNP - Wheat_2014_90KSNP_3B IWA344 locus 74.26 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM13-Berkut-x-PI262611 - Wheat-2018-NAM13-BxPI262611_3B wsnp_BE517914B_Ta_2_5 locus 81.6 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM4-Berkut-x-PI366716 - Wheat-2018-NAM4-BxPI366716_3B wsnp_BE517914B_Ta_2_5 locus 103.7 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM12-Berkut-x-CItr11223 - Wheat-2018-NAM12-BxCItr11223_3B wsnp_BE517914B_Ta_2_5 locus 80.6 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM8-Berkut-x-PBW343 - Wheat-2018-NAM8-BxPBW343_3B wsnp_BE517914B_Ta_2_5 locus 77.1 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM5-Berkut-x-PI382150 - Wheat-2018-NAM5-BxPI382150_3B wsnp_BE517914B_Ta_2_5 locus 118.9 () Automated name-based View Maps
UCW016BE517914-2 locus 4.1 Wheat ABD - Wheat, Physical, EST - Chinese_Spring_Deletion_3B UCW016BE517914-2 locus 0.56 () Automated name-based View Maps
Xwmc206-3B locus 6.3 Wheat ABD - Wheat, WxM, FHB QTL - Triticum-WxM-FHB-QTL-3B Xwmc206-3B locus 168.8 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-3B Xwmc206-3B locus 114.3 () Automated name-based View Maps
wmc206-3B locus 6.3 Wheat ABD - Wheat, Yr Update, 2021 - Wheat_Yr_2021-3B wmc206-3B locus 179.11 (cM) Automated name-based View Maps
Xgwm547-3B locus 21.5 Wheat AB - Durum wheat, Kofa x UC1113 - Kofa/UC1113-3B Xgwm547-3B locus 180 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_3B Xgwm547-3B locus 0.82 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-3B Xgwm547-3B locus 135.5 () Automated name-based View Maps
Wheat ABD - Wheat, Grandin x BR34 - Ta-Grandin/BR34-3B Xgwm547-3B locus 272.7 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-3B Xgwm547-3B locus 249.5 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, update - Ta-Synthetic/Opata-update-3B Xgwm547-3B locus 372.2 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-3B Xgwm547-3B locus 137.7 () Automated name-based View Maps
gwm547-3B locus 21.5 Wheat AB - Wheat_AB_2015_Consensus - Wheat_AB_2015_Consensus-3B gwm547-3B locus 209.3 () Automated name-based View Maps
Wheat ABD - Wheat-2014-Consensus-Ug99-Update - Wheat-2014-Consensus-Ug99-Update gwm547-3B locus 182.16 () Automated name-based View Maps
Wheat AB - Wheat_AB, Kofa x UC1113 - Wheat_AB, Kofa x UC1113 3B_3 gwm547-3B locus 0 () Automated name-based View Maps
Wheat ABD - Wheat, Yr Update, 2021 - Wheat_Yr_2021-3B gwm547-3B locus 209.39 (cM) Automated name-based View Maps
gwm547 locus 21.5 Wheat ABD - 3B Physical - Physical-3B gwm547 locus 178.6 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 3B gwm547 locus 98.1 () Automated name-based View Maps
Wheat ABD - Wheat_Consensus_2014_Ug99_Rust - Wheat_Consensus_2014_Ug99_Rust_3 gwm547 locus 182.16 () Automated name-based View Maps
Wheat AB - Durum Wheat, NSGC Lr - Durum Wheat, NSGC Lr 3B gwm547 locus 209.3 () Automated name-based View Maps
Xgwm547 locus 21.5 Wheat ABD - Wheat, Composite, 2004 - Wheat-Composite2004-3B Xgwm547 locus 100 () Automated name-based View Maps
Wheat ABD - Wheat, Avalon x Cadenza - Wheat, Avalon x Cadenza 3B Xgwm547 locus 224.6 () Automated name-based View Maps
Xgwm181-3B locus 22.8 Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_3B Xgwm181-3B locus 0.82 () Automated name-based View Maps
Wheat AB - Durum wheat, Kofa x UC1113 - Kofa/UC1113-3B Xgwm181-3B locus 179.4 () Automated name-based View Maps
Wheat AB - T. turgidum, Omrabi5 x dicoccoides, QTL - Tt-Oxd-QTL-3B Xgwm181-3B locus 192.3 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, update - Ta-Synthetic/Opata-update-3B Xgwm181-3B locus 397.7 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-3B Xgwm181-3B locus 139.3 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-3B Xgwm181-3B locus 253.4 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-3B Xgwm181-3B locus 199.8 () Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-3B Xgwm181-3B locus 220 () Automated name-based View Maps
gwm181-3B locus 22.8 Wheat AB - Wheat_AB, Simeto x Levante - Wheat_AB, Simeto x Levante 3B_3 gwm181-3B locus 50.8 () Automated name-based View Maps
Wheat AB - Wheat_AB, W9292-260D3 x Kofa - Wheat_AB, W9292-260D3 x Kofa 3B_ gwm181-3B locus 20.8 () Automated name-based View Maps
Wheat AB - Wheat_AB_2015_Consensus - Wheat_AB_2015_Consensus-3B gwm181-3B locus 211.9 () Automated name-based View Maps
Wheat AB - Wheat_AB, Latino x MG5323 - Wheat_AB, Latino x MG5323 3B gwm181-3B locus 170 () Automated name-based View Maps
Wheat AB - Wheat_AB, Kofa x UC1113 - Wheat_AB, Kofa x UC1113 3B_3 gwm181-3B locus 0.6 () Automated name-based View Maps
Wheat AB - Wheat_AB, Langdon x G18-16 - Wheat_AB, Langdon x G18-16 3B gwm181-3B locus 167.2 () Automated name-based View Maps
Xgwm181 locus 22.8 Wheat AB - T. turgidum, Langdon x G18-16 - Tt-LxG-3B Xgwm181 locus 217.3 () Automated name-based View Maps
Wheat ABD - Wheat, Composite, 2004 - Wheat-Composite2004-3B Xgwm181 locus 99 () Automated name-based View Maps
gwm181 locus 22.8 Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 3B gwm181 locus 100 () Automated name-based View Maps
Wheat ABD - 3B Physical - Physical-3B gwm181 locus 178.6 () Automated name-based View Maps
Wheat AB - Durum Wheat, NSGC Lr - Durum Wheat, NSGC Lr 3B gwm181 locus 211.9 () Automated name-based View Maps
Wheat ABD - Wheat, Yr Update, 2021 - Wheat_Yr_2021-3B gwm181 locus 213.42 (cM) Automated name-based View Maps
BF474092 locus 26.9 Wheat D - Aegilops_tauschii_D_genome_2013 - Aegilops_tauschii_2013_1D BF474092 locus 58.74 () Automated name-based View Maps
UNL036BF474092-1 locus 26.9 Wheat ABD - Wheat, Physical, EST - Chinese_Spring_Deletion_3B UNL036BF474092-1 locus 0.82 () Automated name-based View Maps
BE517923 locus 28.3 Wheat D - Aegilops_tauschii_D_genome_2013 - Aegilops_tauschii_2013_3D BE517923 locus 106.34 () Automated name-based View Maps
UNL036BE517923-2 locus 28.3 Wheat ABD - Wheat, Physical, EST - Chinese_Spring_Deletion_3B UNL036BE517923-2 locus 0.82 () Automated name-based View Maps
YrH922 locus 31 No other positions

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.