*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Wheat ABD-Wheat, Yr genes and QTL
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Wheat, Yr genes and QTL 3A
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
locus
qtl
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Wheat ABD - Wheat, Yr genes and QTL [ View Map Set Info ]
Map Name: Wheat, Yr genes and QTL 3A
Map Start: 0.00
Map Stop: 100.00
Features by Type:
2,756 locus
4 qtl
2,760 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 26 to 50 of 2,760.       Previous | of 111 | Next
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 3A
(Click headers to resort)
Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
IWB50521 locus 6.20 Wheat ABD - Wheat_2014_90KSNP - Wheat_2014_90KSNP_3D IWB50521 locus 4.00 () Automated name-based View Maps
Wheat AB - Wheat_AB_2015_Consensus - Wheat_AB_2015_Consensus-3A IWB50521 locus 0.60 () Automated name-based View Maps
Wheat AB - Wheat_AB, Svevo x Zavitan - Wheat_AB, Svevo x Zavitan 3A IWB50521 locus 2.00 () Automated name-based View Maps
IWB5925 locus 6.20 Wheat AB - Wheat_AB, Svevo x Zavitan - Wheat_AB, Svevo x Zavitan 3A IWB5925 locus 2.00 () Automated name-based View Maps
Wheat ABD - Wheat_2014_90KSNP - Wheat_2014_90KSNP_3D IWB5925 locus 2.18 () Automated name-based View Maps
Wheat AB - Wheat_AB_2015_Consensus - Wheat_AB_2015_Consensus-3A IWB5925 locus 0.60 () Automated name-based View Maps
IWA6092 locus 6.20 Wheat ABD - Wheat, NSGC Yr - Wheat, NSGC Yr 3B IWA6092 locus 0.00 () Automated name-based View Maps
Wheat AB - Wheat_AB_2015_Consensus - Wheat_AB_2015_Consensus-3A IWA6092 locus 0.60 () Automated name-based View Maps
Wheat ABD - Wheat, 2013 9K Consensus - Wheat, 2013 9K Consensus 3B IWA6092 locus 0.00 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 3B IWA6092 locus 5.40 () Automated name-based View Maps
Wheat AB - Wheat_AB, Svevo x Zavitan - Wheat_AB, Svevo x Zavitan 3A IWA6092 locus 2.00 () Automated name-based View Maps
IWB56611 locus 6.20 Wheat ABD - Wheat_2014_90KSNP - Wheat_2014_90KSNP_3D IWB56611 locus 4.00 () Automated name-based View Maps
Wheat AB - Wheat_AB_2015_Consensus - Wheat_AB_2015_Consensus-3A IWB56611 locus 0.60 () Automated name-based View Maps
Wheat AB - Wheat_AB, Svevo x Zavitan - Wheat_AB, Svevo x Zavitan 3A IWB56611 locus 2.00 () Automated name-based View Maps
tPt-512978 locus 6.20 No other positions
SBG_51695 locus 6.20 No other positions
SBG_112259 locus 6.20 No other positions
wPt-7217 locus 6.30 Wheat ABD - Wheat_Consensus_2014_Ug99_Rust - Wheat_Consensus_2014_Ug99_Rust_3 wPt-7217 locus 34.70 () Automated name-based View Maps
Wheat ABD - Wheat-2014-Consensus-Ug99-Update - Wheat-2014-Consensus-Ug99-Update wPt-7217 locus 34.70 () Automated name-based View Maps
wPt-8585 locus 6.30 No other positions
wPt-3476 locus 6.30 No other positions
wPt-4480 locus 6.30 No other positions
wPt-1331 locus 6.30 No other positions
wPt-0096 locus 6.30 No other positions
wPt-0546 locus 6.30 No other positions
IWB21797 locus 6.30 Wheat AB - Wheat_AB_2015_Consensus - Wheat_AB_2015_Consensus-3A IWB21797 locus 1.30 () Automated name-based View Maps
Wheat AB - Wheat_AB, Colosseo x Lloyd - Wheat_AB, Colosseo x Lloyd 3A_1 IWB21797 locus 0.00 () Automated name-based View Maps
Wheat AB - Wheat_AB, Simeto x Molise Colli - Wheat_AB, Simeto x Molise Colli IWB21797 locus 1.70 () Automated name-based View Maps
Wheat AB - Wheat_AB, Svevo x Ciccio - Wheat_AB, Svevo x Ciccio 3A_1 IWB21797 locus 0.50 () Automated name-based View Maps
Wheat AB - Wheat_AB, Svevo x Zavitan - Wheat_AB, Svevo x Zavitan 3A IWB21797 locus 3.10 () Automated name-based View Maps
Wheat AB - Wheat_AB, Simeto x Levante - Wheat_AB, Simeto x Levante 3A1 IWB21797 locus 0.00 () Automated name-based View Maps
wPt-1464 locus 6.30 No other positions
wPt-3041 locus 6.30 Wheat ABD - Wheat-2014-Consensus-Ug99-Update - Wheat-2014-Consensus-Ug99-Update wPt-3041 locus 36.80 () Automated name-based View Maps
Wheat ABD - Wheat_Consensus_2014_Ug99_Rust - Wheat_Consensus_2014_Ug99_Rust_3 wPt-3041 locus 36.80 () Automated name-based View Maps
IWA2952 locus 6.40 Wheat ABD - Wheat, 2013 9K Consensus - Wheat, 2013 9K Consensus 3A IWA2952 locus 1.56 () Automated name-based View Maps
wPt-743723 locus 6.50 No other positions
wPt-664488 locus 6.50 No other positions
IWA2174 locus 6.70 Wheat ABD - Wheat_2014_90KSNP - Wheat_2014_90KSNP_3A IWA2174 locus 15.05 () Automated name-based View Maps
Wheat ABD - Wheat, 2013 9K Consensus - Wheat, 2013 9K Consensus 3A IWA2174 locus 2.17 () Automated name-based View Maps
wPt-2253 locus 6.70 No other positions
wPt-7485 locus 6.70 No other positions
IWB56328 locus 6.80 Wheat AB - Wheat_AB, Svevo x Zavitan - Wheat_AB, Svevo x Zavitan 3A IWB56328 locus 12.50 () Automated name-based View Maps
Wheat AB - Wheat_AB_2015_Consensus - Wheat_AB_2015_Consensus-3A IWB56328 locus 5.30 () Automated name-based View Maps
IWB56327 locus 6.80 Wheat ABD - Wheat_2014_90KSNP - Wheat_2014_90KSNP_3B IWB56327 locus 5.86 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 3B IWB56327 locus 3.80 () Automated name-based View Maps
Wheat AB - Wheat_AB, Svevo x Zavitan - Wheat_AB, Svevo x Zavitan 3A IWB56327 locus 12.50 () Automated name-based View Maps
Wheat AB - Wheat_AB_2015_Consensus - Wheat_AB_2015_Consensus-3A IWB56327 locus 5.30 () Automated name-based View Maps

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.