*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Wheat ABD-Wheat, Yr genes and QTL
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Wheat, Yr genes and QTL 6D
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
baccontig
locus
qtl
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
(Hide Advanced Menu)

Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Wheat ABD - Wheat, Yr genes and QTL [ View Map Set Info ]
Map Name: Wheat, Yr genes and QTL 6D
Map Start: 0.00
Map Stop: 100.00
Features by Type:
24 baccontig
770 locus
3 qtl
797 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 797.       of 32 | Next
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 6D
(Click headers to resort)		 Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
IWB45121.2 locus 0.00 No other positions
IWB53944 locus 2.40 Wheat ABD - Wheat_2014_90KSNP - Wheat_2014_90KSNP_6D IWB53944 locus 3.96 () Automated name-based View Maps
wPt-2864 locus 3.20 Wheat ABD - Wheat, UC1110 x PI610750 - Wheat, UC1110 x PI610750 6D wPt-2864 locus 0.00 () Automated name-based View Maps
wPt-10019 locus 3.20 No other positions
wPt-0653 locus 3.20 No other positions
wPt-1519 locus 4.70 No other positions
IWB64086 locus 5.40 Wheat ABD - Wheat_2014_90KSNP - Wheat_2014_90KSNP_6D IWB64086 locus 9.07 () Automated name-based View Maps
IWA6673 locus 5.60 Wheat ABD - Wheat_2014_90KSNP - Wheat_2014_90KSNP_6D IWA6673 locus 9.47 () Automated name-based View Maps
Wheat ABD - Wheat, 2013 9K Consensus - Wheat, 2013 9K Consensus 6A IWA6673 locus 172.45 () Automated name-based View Maps
Wheat ABD - Wheat, 2013 9K Consensus - Wheat, 2013 9K Consensus 6D3 IWA6673 locus 0.00 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 6A IWA6673 locus 61.10 () Automated name-based View Maps
IWA4000 locus 5.60 Wheat ABD - Wheat, 2013 9K Consensus - Wheat, 2013 9K Consensus 6D2 IWA4000 locus 58.01 () Automated name-based View Maps
Wheat ABD - Wheat_2014_90KSNP - Wheat_2014_90KSNP_6D IWA4000 locus 9.47 () Automated name-based View Maps
Wheat ABD - Wheat, 2013 9K Consensus - Wheat, 2013 9K Consensus 6A IWA4000 locus 172.45 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 6A IWA4000 locus 61.10 () Automated name-based View Maps
IWA2338 locus 5.60 Wheat ABD - Wheat, 2013 9K Consensus - Wheat, 2013 9K Consensus 6D3 IWA2338 locus 0.00 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 6A IWA2338 locus 61.10 () Automated name-based View Maps
Wheat ABD - Wheat, 2013 9K Consensus - Wheat, 2013 9K Consensus 6A IWA2338 locus 172.45 () Automated name-based View Maps
Wheat ABD - Wheat_2014_90KSNP - Wheat_2014_90KSNP_6D IWA2338 locus 9.47 () Automated name-based View Maps
IWB7108 locus 5.60 Wheat ABD - Wheat_2014_90KSNP - Wheat_2014_90KSNP_6D IWB7108 locus 9.47 () Automated name-based View Maps
IWB65876 locus 5.60 Wheat ABD - Wheat_2014_90KSNP - Wheat_2014_90KSNP_6D IWB65876 locus 9.47 () Automated name-based View Maps
IWB64081 locus 5.60 Wheat ABD - Wheat_2014_90KSNP - Wheat_2014_90KSNP_6D IWB64081 locus 9.47 () Automated name-based View Maps
IWB6263 locus 5.60 Wheat ABD - Wheat_2014_90KSNP - Wheat_2014_90KSNP_6D IWB6263 locus 9.47 () Automated name-based View Maps
IWB62375 locus 5.60 Wheat ABD - Wheat_2014_90KSNP - Wheat_2014_90KSNP_6D IWB62375 locus 9.47 () Automated name-based View Maps
IWB59133 locus 5.60 Wheat ABD - Wheat_2014_90KSNP - Wheat_2014_90KSNP_6D IWB59133 locus 9.47 () Automated name-based View Maps
IWB41696 locus 5.60 Wheat AB - Wheat_AB_2015_Consensus - Wheat_AB_2015_Consensus-6B IWB41696 locus 4.80 () Automated name-based View Maps
Wheat AB - Wheat_AB, Svevo x Zavitan - Wheat_AB, Svevo x Zavitan 6B IWB41696 locus 1.90 () Automated name-based View Maps
Wheat AB - Wheat_AB, Svevo x Ciccio - Wheat_AB, Svevo x Ciccio 6B IWB41696 locus 2.50 () Automated name-based View Maps
Wheat AB - Wheat_AB, Simeto x Levante - Wheat_AB, Simeto x Levante 6B IWB41696 locus 1.30 () Automated name-based View Maps
Wheat ABD - Wheat_2014_90KSNP - Wheat_2014_90KSNP_6D IWB41696 locus 9.47 () Automated name-based View Maps
Wheat AB - Wheat_AB, Colosseo x Lloyd - Wheat_AB, Colosseo x Lloyd 6B IWB41696 locus 7.60 () Automated name-based View Maps
IWB36862 locus 5.60 Wheat ABD - Wheat_2014_90KSNP - Wheat_2014_90KSNP_6D IWB36862 locus 9.47 () Automated name-based View Maps
IWB26904 locus 5.60 Wheat ABD - Wheat_2014_90KSNP - Wheat_2014_90KSNP_6D IWB26904 locus 9.47 () Automated name-based View Maps
IWB22288 locus 5.60 Wheat ABD - Wheat_2014_90KSNP - Wheat_2014_90KSNP_6D IWB22288 locus 9.47 () Automated name-based View Maps
IWB1786 locus 5.60 Wheat ABD - Wheat_2014_90KSNP - Wheat_2014_90KSNP_6D IWB1786 locus 9.47 () Automated name-based View Maps
IWB10804 locus 5.60 Wheat ABD - Wheat_2014_90KSNP - Wheat_2014_90KSNP_6D IWB10804 locus 9.47 () Automated name-based View Maps
IWA2339 locus 5.60 Wheat ABD - Wheat, 2013 9K Consensus - Wheat, 2013 9K Consensus 6D3 IWA2339 locus 0.00 () Automated name-based View Maps
IWB23072 locus 6.40 Wheat AB - Wheat_AB_2015_Consensus - Wheat_AB_2015_Consensus-6B IWB23072 locus 4.10 () Automated name-based View Maps
Wheat ABD - Wheat_2014_90KSNP - Wheat_2014_90KSNP_6D IWB23072 locus 10.70 () Automated name-based View Maps
Wheat AB - Wheat_AB, Simeto x Levante - Wheat_AB, Simeto x Levante 6B IWB23072 locus 0.00 () Automated name-based View Maps
IWB55116 locus 8.50 Wheat ABD - Wheat_2014_90KSNP - Wheat_2014_90KSNP_6D IWB55116 locus 14.35 () Automated name-based View Maps

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.