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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Wheat ABD-Wheat deletion-line bins
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps CS-deletions-4D
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
breakpointinterval
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
(Hide Advanced Menu)

Map Details

Map Type: Cytogenetic [ View Map Type Info ]
Map Set Name: Wheat ABD - Wheat deletion-line bins [ View Map Set Info ]
Map Name: CS-deletions-4D
Map Start: -1
Map Stop: 1
Features by Type:
8 breakpointinterval
8 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 8 of 8.
Wheat ABD - Wheat deletion-line bins - CS-deletions-4D
(Click headers to resort)		 Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
4DS2-0.82-1.00 breakpointinterval -1 - -0.82 Wheat ABD - Wheat, Physical, EST - Chinese_Spring_Deletion_4D 4DS2-0.82-1.00 breakpointinterval -1 - -0.82 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_4D 4DS2-0.82-1.00 breakpointinterval -1 - -0.82 () Automated name-based View Maps
4DS3-0.67-0.82 breakpointinterval -0.82 - -0.67 Wheat ABD - Wheat, Physical, EST - Chinese_Spring_Deletion_4D 4DS3-0.67-0.82 breakpointinterval -0.82 - -0.67 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_4D 4DS3-0.67-0.82 breakpointinterval -0.82 - -0.67 () Automated name-based View Maps
4DS1-0.53-0.67 breakpointinterval -0.67 - -0.53 Wheat ABD - Wheat, Physical, EST - Chinese_Spring_Deletion_4D 4DS1-0.53-0.67 breakpointinterval -0.67 - -0.53 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_4D 4DS1-0.53-0.67 breakpointinterval -0.67 - -0.53 () Automated name-based View Maps
C-4DS1-0.53 breakpointinterval -0.53 - 0 Wheat ABD - Wheat, Physical, EST - Chinese_Spring_Deletion_4D C-4DS1-0.53 breakpointinterval -0.53 - 0 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_4D C-4DS1-0.53 breakpointinterval -0.53 - 0 () Automated name-based View Maps
C-4DL9-0.31 breakpointinterval 0 - 0.31 Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_4D C-4DL9-0.31 breakpointinterval 0 - 0.31 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, EST - Chinese_Spring_Deletion_4D C-4DL9-0.31 breakpointinterval 0 - 0.31 () Automated name-based View Maps
4DL9-0.31-0.56 breakpointinterval 0.31 - 0.56 Wheat ABD - Wheat, Physical, EST - Chinese_Spring_Deletion_4D 4DL9-0.31-0.56 breakpointinterval 0.31 - 0.56 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_4D 4DL9-0.31-0.56 breakpointinterval 0.31 - 0.56 () Automated name-based View Maps
4DL13-0.56-0.71 breakpointinterval 0.56 - 0.71 Wheat ABD - Wheat, Physical, EST - Chinese_Spring_Deletion_4D 4DL13-0.56-0.71 breakpointinterval 0.56 - 0.71 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_4D 4DL13-0.56-0.71 breakpointinterval 0.56 - 0.71 () Automated name-based View Maps
4DL12-0.71-1.00 breakpointinterval 0.71 - 1 Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_4D 4DL12-0.71-1.00 breakpointinterval 0.71 - 1 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, EST - Chinese_Spring_Deletion_4D 4DL12-0.71-1.00 breakpointinterval 0.71 - 1 () Automated name-based View Maps

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