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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Wheat ABD-Wheat deletion-line bins
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps CS-deletions-5B
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
breakpointinterval
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
(Hide Advanced Menu)

Map Details

Map Type: Cytogenetic [ View Map Type Info ]
Map Set Name: Wheat ABD - Wheat deletion-line bins [ View Map Set Info ]
Map Name: CS-deletions-5B
Map Start: -1
Map Stop: 1
Features by Type:
11 breakpointinterval
11 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 11 of 11.
Wheat ABD - Wheat deletion-line bins - CS-deletions-5B
(Click headers to resort)		 Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
5BS6-0.81-1.00 breakpointinterval -1 - -0.81 Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_5B 5BS6-0.81-1.00 breakpointinterval -1 - -0.81 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, EST - Chinese_Spring_Deletion_5B 5BS6-0.81-1.00 breakpointinterval -1 - -0.81 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, Group 5 - Ta-Physical-Sarma-5B 5BS6-0.81-1.00 breakpointinterval -1 - -0.81 () Automated name-based View Maps
5BS5-0.71-0.81 breakpointinterval -0.81 - -0.71 Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_5B 5BS5-0.71-0.81 breakpointinterval -0.81 - -0.71 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, Group 5 - Ta-Physical-Sarma-5B 5BS5-0.71-0.81 breakpointinterval -0.81 - -0.71 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, EST - Chinese_Spring_Deletion_5B 5BS5-0.71-0.81 breakpointinterval -0.81 - -0.71 () Automated name-based View Maps
5BS8-0.56-0.71 breakpointinterval -0.71 - -0.56 Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_5B 5BS8-0.56-0.71 breakpointinterval -0.71 - -0.56 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, EST - Chinese_Spring_Deletion_5B 5BS8-0.56-0.71 breakpointinterval -0.71 - -0.56 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, Group 5 - Ta-Physical-Sarma-5B 5BS8-0.56-0.71 breakpointinterval -0.71 - -0.56 () Automated name-based View Maps
C-5BL6-0.29 breakpointinterval 0 - 0.29 Wheat ABD - Wheat, Physical, Group 5 - Ta-Physical-Sarma-5B C-5BL6-0.29 breakpointinterval 0 - 0.29 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, EST - Chinese_Spring_Deletion_5B C-5BL6-0.29 breakpointinterval 0 - 0.29 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_5B C-5BL6-0.29 breakpointinterval 0 - 0.29 () Automated name-based View Maps
5BL14-0.75-0.76 breakpointinterval 0.75 - 0.76 Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_5B 5BL14-0.75-0.76 breakpointinterval 0.75 - 0.76 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, EST - Chinese_Spring_Deletion_5B 5BL14-0.75-0.76 breakpointinterval 0.75 - 0.76 () Automated name-based View Maps
Wheat ABD - 5BL, CS, 0.75-0.79 interval - 5BL, CS, 0.75-0.79 interval 5BL14-0.75-0.76 breakpointinterval 0 - 6 () Automated name-based View Maps
5BL9-0.76-0.79 breakpointinterval 0.76 - 0.79 Wheat ABD - Wheat, Physical, EST - Chinese_Spring_Deletion_5B 5BL9-0.76-0.79 breakpointinterval 0.76 - 0.79 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_5B 5BL9-0.76-0.79 breakpointinterval 0.76 - 0.79 () Automated name-based View Maps
Wheat ABD - 5BL, CS, 0.75-0.79 interval - 5BL, CS, 0.75-0.79 interval 5BL9-0.76-0.79 breakpointinterval 6 - 49.5 () Automated name-based View Maps
5BL1-0.55-0.75 breakpointinterval 0.55 - 0.75 Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_5B 5BL1-0.55-0.75 breakpointinterval 0.55 - 0.75 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, EST - Chinese_Spring_Deletion_5B 5BL1-0.55-0.75 breakpointinterval 0.55 - 0.75 () Automated name-based View Maps
5BL16-0.79-1.00 breakpointinterval 0.79 - 1 Wheat ABD - Wheat, Physical, EST - Chinese_Spring_Deletion_5B 5BL16-0.79-1.00 breakpointinterval 0.79 - 1 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_5B 5BL16-0.79-1.00 breakpointinterval 0.79 - 1 () Automated name-based View Maps
5BS4-0.43-0.56 breakpointinterval -0.56 - -0.43 Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_5B 5BS4-0.43-0.56 breakpointinterval -0.56 - -0.43 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, Group 5 - Ta-Physical-Sarma-5B 5BS4-0.43-0.56 breakpointinterval -0.56 - -0.43 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, EST - Chinese_Spring_Deletion_5B 5BS4-0.43-0.56 breakpointinterval -0.56 - -0.43 () Automated name-based View Maps
C-5BS4-0.43 breakpointinterval -0.43 - 0 Wheat ABD - Wheat, Physical, EST - Chinese_Spring_Deletion_5B C-5BS4-0.43 breakpointinterval -0.43 - 0 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_5B C-5BS4-0.43 breakpointinterval -0.43 - 0 () Automated name-based View Maps
5BL6-0.29-0.55 breakpointinterval 0.29 - 0.55 Wheat ABD - Wheat, Physical, EST - Chinese_Spring_Deletion_5B 5BL6-0.29-0.55 breakpointinterval 0.29 - 0.55 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_5B 5BL6-0.29-0.55 breakpointinterval 0.29 - 0.55 () Automated name-based View Maps

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