GrainGenes | A Database for Triticeae and Avena

Wheat Gene Catalog - 2006 Supplement.

V. CATALOGUE OF GENE SYMBOLS FOR WHEAT: 2007 Supplement.

R.A. McIntosh ¹, K.M. Devos ², J. Dubcovsky ³, W.J. Rogers ⁴, C.F. Morris ⁵, R. Appels ⁶, D.J. Somers ⁷, and O.A. Anderson ⁸.

¹ Plant Breeding Institute, The University of Sydney Plant Breeding Institute Cobbitty, Private Bag 11, Camden, N.S.W. 2570, Australia. bobm@camden.usyd.edu.au
² Departments of Crop and Soil Sciences, and Plant Biology, University of Georgia, Athens, GA 30602, U.S.A. kdevos@uga.edu
³ Department of Agronomy and Range Science, University of California, Davis, CA 95616, U.S.A. jdubcovsky@ucdavis.edu
⁴ Facultad de Agronomía, Universidad Nacional del Centro de la Provincia de Buenos Aires, C.C. 47, (7300) Azul, and Researcher of CONICET, Argentina. rogers@faa.unicen.edu.ar
⁵ USDA-ARS Western Wheat Laboratory, Pullman, WA 99164-6394, U.S.A. morrisc@wsu.edu
⁶ W.A. Department of Agriculture & Molecular Plant Breeding Research Centre, Biological Sciences, Murdoch University, Locked Bag 4, Bentley Delivery Centre, Perth, W.A. 6983, Australia. rappels@agric.wa.gov.au
⁷Agriculture and Agri-Food CanadaCereal Research Centre, 195 Dafor Road, Winnipeg, MB, Canada. SomersD@agr.gc.ca
⁸USDA-ARS 800 Buchanan St., Albany, CA 94710, U.S.A. oandersn@pw.usda

The most recent edition of the Catalogue, produced and presented at the 10^th International Wheat Genetics Symposium is available on CD. MacGene was produced by Y. Yamazaki (yyamazak@lab.nig.ac.jp) in collaboration with R.A. McIntosh. The Catalogue and the 2004, 2005, 2006, and 2007 Supplement are displayed on the GrainGenes Website: http://wheat.pw.usda.gov.

2007 Supplement

Revisions.

INTRODUCTION
Recommended Rules

9. Laboratory Designators for DNA markers

fcc	(Fargo cereal crops unit - for QTL) Faris, Justin D. USDA-ARS Cereal Crops Research Unit Northern Crop Science Laboratory Agricultural Research Center Fargo, ND 58105 USA farisj@fargo.ars.usda.gov
fcg	(Fargo cereal crops genomic DNA - for genomic DNA clones) Faris, Justin D. USDA-ARS Cereal Crops Research Unit Northern Crop Science Laboratory Agricultural Research Center Fargo, ND 58105 USA farisj@fargo.ars.usda.gov
fcp	(Fargo cereal crops PCR - for PCR markers) Faris, Justin D. USDA-ARS Cereal Crops Research Unit Northern Crop Science Laboratory Agricultural Research Center Fargo, ND 58105 USA farisj@fargo.ars.usda.gov
fcu	(Fargo cereal crops cDNA - for cDNA clones) Faris, Justin D. USDA-ARS Cereal Crops Research Unit Northern Crop Science Laboratory Agricultural Research Center Fargo, ND 58105 USA farisj@fargo.ars.usda.gov
unlp	Castro, A.M. Genetics Faculty of Agricultural Sciences UNLP CC31, 1900-La Plata Argentina
spa	Dr. R. Knox Semiarid and Prairie Research Centre Agriculture and Agri-Food Canada P.O. Box 1030 Swift Current, SK S9H 3X2 Canada
cmw	Chinese wheat eSSR Fu et al. 2006 TAG 112: 1239-1247.
cnl	Cornell University eSSR Yu et al. 2004 Genome 47: 805-818.
hbd	SSR loci from sequences in DDBJ {10330}.
hbe	EST sequence based SSR {10330}.
hbg	Genomic SSR {10330}.

Gene Symbol
Add to gene symbols list:

Almt. Malate transporter (GeneBank AB081803).

Nam1. Regulation of senescence and grain maturity. Pleiotropic effects in grain protein and nutrient content (iron and zinc).

Lvl. Loaf volume.

Vrt-2. Mads-box (GenBank DQ022679) {10294}.

Morphological and Physiological Traits

1. Gross Morphology: Spike characteristics

Insert at the end of the introductory paragraph: In a large study of six agronomic traits in a AC Karma / 87E03-S2B1 DH populaton, 24 QTL were detected in 12 chromosomes {10434}.

5.5. Purple grain/pericarp

Pp1. 7BL {10392}. v: Novosibirsk 67 {10392}. Note, this cultivar has white pericarp.

v2: Purple K49426 Pp3a {10392}; Purple Feed Pp3b {10392}.

ma: Xgwm983-7B 15.2 cM Pp1 11.3 cM Xgwm767-7B {10392}.

Pp2. Add note: Pp2 was renamed Pp3b.

Pp3 {10392}. 2A, not 6A {0066; 10392}.

Pp3a {10392}. v2: Purple K49426 Pp1 {10392}.

ma: Xgwm328-2AS 2.7 cM Pp3a 3.2 cM Xgwm817-2AL {10392}.

Pp3b {10392}. Pp2.

v2: Purple Feed {0066, 10392}.

ma: Xgwm328-2AS 5.2 cM Pp3b/Xgwm817/Xgwm912-2A 3.6 cM Xgwm445-2A {10392}.

pp1pp3. v: Saratovskaya 29 {10392}. Note, this cultivar has red pericarp.

6. Awnedness

6.1.2. Tipped 1

B1. ma: Correct the first entry to: Xgwm410.2-5A 8.2 cM B1 12.2 cM Yr34 {10040}. Add: Xgwm291-5A.3 5.3 cM B1 {10330}.

9. Brittle Rachis

Br-D1. Br⁶¹ {10362}. v: R-61 {10362}.

17. Dormancy (Seed)

QTL: After Zenkoujikomugi/CS add:
Zenkoujikomugi/Spica: White-seeded wheats with the dormancy-related QTL, QPhs-3AS from Zenkoujikomugi were more resistant to PHS than counterparts with the contrasting allele from Spica {10377}. White-seeded wheats with contrasting alleles of QPhs-4AL were not different {10377}.

Diploid wheat
QTL: T. monococcum subsp. monococcum KT3-5 (nondormant) / T. monococcum subsp. aegilopoides KT1-1 (dormant): RIL population: QTL on chromosome 5A^mL, Xcdo1326c-5A - Xabc302-5A), R² = 0.2 - 0.27. Weaker QTL were found on 3A^m (TmAB18 Xwmc102-3A and Xrz444-3A TmABF) and 4A^m (Xrz261-4A Xrz141-4A) {0892}. The 3A^m QTL co-located with TmABF and TmAB18 {10417}, derived from othologous ABA signaling genes in Arabidopsis. The 5A QTL may be orthologous to the barley dormancy gene SD1 {10417}.

23. Frost Resistance

QTL: Norstar (tolerant) / Winter Manitou (nontolerant: DH population: Norstar possessed major and minor QTL for tolerance on chromosomes 5A and 1D. The 5A QTL was 46 cM proximal to the vrn-A1 locus (R² = 0.4); its peak co-incided with Xwmc206-5A and Xcfd2-5A, and expression of C-repeat Binding Factor genes with strong homology to Cfb14 and Cfb15 located at the Fr-2 locus in T. monococcum subsp. monococcum {10414}.

27. Glume Colour and Awn Colour

Black glumes are now included in the following homoeologous series with red/brown/bronze glumes.

27.1. Red (brown/bronze/black) glumes

The majority of studies report a single dominant gene for red glume colour. A few papers report two factors {1009, 1477, 1520}. Red glume colour in Swedish land cultivars is apparently associated with hairy glumes {1277} suggesting, because Hg is located in chromosome 1A, that a red glume factor different from Rg1 was involved in the Swedish stocks. Nothing was known of the possible association of such a gene with Bg, another glume colour gene on 1A. See {1640} for review. A chromosome 1A gene, Rg3, was eventually identified by linkage with Gli-A1 {1405} and shown to cosegregate with Hg {624}.

Rg-A1 {10378}. Rg3 {924,562}. 1AS {924, 562, 9906}.

Rg-A1a {10378}. v: TRI 542 {10378}; white-glumed genotypes.

dv: DV92 {282}; G2528 {10378}.

Rg-A1b {10378}. Rg3. i: Saratovskaya 29^*3 // F2 CS mono 1 / Strela {924}.

v: CS / Strela Seln {9906}; Iskra {9906}; L'goskaya-4 {1405}; L'govskaya-47 {1405}; Zhnitsa {9906, 10378}.

v2: Milturum 553 RgB1b {9906}; Milturum 321 Rg-B1b {9906}; Strela Rg-B1b {9906, 924}; Sobko & Sozinov {1405, 1406} reported a further group of 30 international wheats which, by inference from their Gli-A1 alleles, probably carry Rg-A1b.

ma: A linkage order of Glu-A1 cent Hg Rg-A1b was reported {1405}.

Rg-A1c {10378}. Bg {282, 1304}, Bg(a) {282}³]. 1A {282,1304}.

i: ANK-22A {10378}; S29BgHg {10378}.

s: CS^*7/Indian 1A {1304}.

dv: G1777 {282}; G3116 {282}.

ma: Rg-A1c(Bg) and Nor9 co-segregated in T. monococcum subsp. monococcum {282}³; Xutv1391-1A (distal) 3 cM Rg-A1c(Bg) 1.6 cM Hg 2.4 cM Gli-A1 (proximal) {9959}². Xgwm1223-A1 0 & 0.6 cM Rg-A1c 4.7 & 4.6 cM Xgwm0136-1A {10378}.
Five of six wheats with Rg-A1c possessed a 264-bp allele at Xgwm0136-1A {10378}.

Rg-A1d. [Bg(b) {282}³]. dv: G3116 {282}.

At the diploid level, Rg-A1c (Bga) and Rg-A1d (Bgb) were dominant and caused a solid black glume and a black line at the margins of the glume, respectively {282}. A single factor for black glumes was reported in diploid, tetraploid, and hexaploid wheats {1347}. Linkage with Hg was demonstrated at all levels of ploidy, indicating a common gene on chromosome 1A; Bg is epistatic to Rg.

Rg-B1 {10378}. Rg1, Rg. 1B {1517}. 1BS {369}.

Rg-B1a {10378}. v: TRI 542 {10378}; white-glumed genotypes.

dv: T. turgidum subsp. dicoccoides acc. MG4343 {9959}.

Rg-B1b {10378}. Rg1. s: CS^*5/Red Egyptian 1B {1304}.

v: Diamant I {9906}; Federation 41 {1517}; Highbury {1121}; Red Egyptian {1304}; T. petrapavlovskyi {9906}.

v2: Milturum 321 Rg-A1b {9906}; Milturum 553 Rg-A1b {9906}; Strela Rg-A1b {9906}.

tv: Messapia {9959}; Ward {792}.

ma: Xytv1518-1B (distal) 7.7 cM RgB1b 0.8 cM G1i-B1 (proximal) {9959}. Xgwm1078-

1B 1.5 cM Rg-B1b 3.1 cM Xgwm0550-B1 {10378}. Xutv1518-1B (distal) 7.7 cM

Rg-B1b 0.8 cM Gli-B1 (proximal) {9959}².

Rg-D1 {10378}. Rg2. 1DL {769,1241}. 1DS.

Rg-D1a {10378}. v: Novosibirskaya 67 {10378}; L301 {10378}; white-glumed genotypes.

Rg-D1b {10378}. Rg2. Derived from Aegilops tauschii.

i: Saratovskaya 29*5 // T. timopheevii subsp. timopheevii / Ae. tauschii {9906}.

v: Synthetic Hexaploid-11 {10128}; (Triticum turgidum subsp. dicoccoides / Ae. tauschii) {769}; (Tetra Canthatch / Ae. tauschii var. strangulata RL 5271), RL 5404 {1240}; (Tetra Canthatch / Ae. tauschii var. meyeri RL 5289), RL 5406 {648, 1240}.

dv: Aegilops squarrosa accessions.

QTL: QRg.ipk.1D was mapped in the Opata/W-7984 (ITMI) mapping population {0255}; Linkage with Gli-D1 implied Rg2. This QTL coincided with a QTL for awn color, QRaw.ipk-1D {0255}.

ma: Xpsp2000-1D 9.3 cM Rg-D1b 21.2 cM Xgwm106-1D{10128}.

Rg-D1c {10378}. Brown or smokey-grey phenotype {729}. Brg {729}.

i: ANK-23 = Novosibirskaya 67*10 / K-28535 {729}.

v: Golubka {10378}; K-28535 {729}; K-40579 {729}; T. aestivum botanical varieties cinereum, columbina, and albiglaucum {10378}.

ma: Xgwm1223-1D 1.5 cm Rg-D1c 13.1 cM Xbarc152-1D {10378}. Xbarc149-1D 6.3 cM Rg-D1c 26.5 cM Xbarc152-1D {10378}.

With the deletion of section 27.2 and its incorporation into 27.1, the following sections' are renumbered as follows:

27.2. Pseudo-black chaff

27.3. Black-striped glumes

27.4. Inhibitor of glume pigment

27.5. Chocolate chaff

27.6. Awn colour

28. Grain Hardness / Endosperm Texture

In the preamble paragraph 2 line 5, correct reference from '0380' to '0384'; that is: 'Friabilin is also referred to by the name 'Grain Softness Protein' (GSP) {0384}, and was later shown to be comprised primarily of puroindoline a and puroindoline b {0295}.'

29. Grain Quality parameters

In a comprehensive study of 46 quality-related traits in a 'RL4452 / AC Domain' RIL population, 99 QTL involving 41 traits were located in 18 chromosomes {10361}; 14 QTL clustered in the Glu-1B region (50 cM), 20 QTL occurred in the Xwmc617-4D Xwmc48-4D region (30 cM), 10 QTL mapped to the Xgwm130-7D Xwmc405-7D region (14 cM), and 66 QTL were dispersed {10361}.

In a large study of 11 seed quality traits in a 'AC Karma / 87E03-S2B1' DH population, 26 QTL were detected in seven chromosomes {10434}; six were clustered in the Glu-D1 region, and five were clustered in the Rht-D1 region.

QTL analyses of 10 milling and baking quality traits (grain hardness, flour yield, grain and flour protein, alkaline water retention capacity (AWRC), sedimentation properties, cookie properties, lactic acid retention, dough strength, extensibility, and mixograph properties) in the ITMI population grown in Mexico, France, and USA (California) are reported in {10436}.

29.2. Flour, semolina and pasta colour

QTL: W9262-260D3 (low yellow colour) / Kofa (high colour): Four QTL identified on chromosomes 2A (Xgwm425-2A), 4B (Xgwm495-4B), 6B (Xgwm193-6B), and Psy-B1 (chromosome 7BL) {10230}. See also Enzymes: Phytoene synthase.

31. Grain Weight

Rye Selection 111 (high GW) / CS (low GW) RIL: two definitive QTL QGw.ccsu-2B.1 and QGw.ccsu-7A.1 and one tentative QTL, QGw.ccsu-1A.1, were detected by CIM analysis{10363}. The chromosome 7A QTL co-located with a QTL for early heading {10363}.

39. Height

Add at end of section: Genotypes of Indian semi-dwarf wheats based on the Ellis et al. {0378} markers are given in {10404}.

40. Hybrid Lethalities

41.1. Hybrid necrosis

Ne1. Following the chromosome location insert:

ma: Xbarc216-5B 8.3 cM Ne1 2 cM Xbarc74-5B {10334}.

Ne1s. v: Add: Synthetics TA4152-19, TA4152-37, TA4152-44, TA4152-60 {10334}.

Ne2. Following the chromosome location insert:

ma: Xgwm148-2B 6.7 cM Ne2 3.2 cM Xbarc55-2B {10334}.

Ne2m. v: Alsen {10334}.

47.Male Sterility

47.1. Chromosomal

ms1g {10355}. 4BS {10354}. v: Lanzhou Mutant 257A {10354, 10355}.

Insert the following after the present entries:

Photoperiod and/or temperature-sensitive male sterility (PTGMS)

wptms1 {10332}. 2B {10332}. v: BNY-S {10332}.

ma: E: AAG/M: CTA₁₆₃ 6.9 cM wtms1 4.8 cM Xgwm374-2B {10332}.

Described as a thermo-sensitive gene (TGMS), giving complete sterility at less than 10°C, but fertile at higher temperatures {10332}.

wptms1 {10333}. 5B {10333}. v: Line 337S wptms2 {10333}.

ma: Xgwm335-5B 4.2 cM wptms1 24.4 cM Xgwm371-5B {10333}.

wptms1 produces sterility only in the presence of wptms2.

wptms2 {10333}. 2B {10333}. v: Line 337S wptms1{10333}.

ma: Xgwms374-2B 6.9 cM wptms2 20.9 cM Xgwm120-2B {10333}.

wptms2 produces sterility only in the presence of wptms1.

wptms1 and wptms2 were analyzed and mapped under long photoperiod/high temperatures, but an earlier study indicated a single gene for male sterility under short photoperiod/low temperatures. Although mapping data are different, a possible relationship between wptms2 and wptms1 needs to be resolved.

56. Polyphenol Oxidase (PPO) Activity

Chara (mod high) / WW2449 (low): DH population: PPO activity Associated with Xgwm294b-2A (R² = 0.82), Xwmc170-2A, Xhwm312-2A, and Xwmc178-2A (R² > 0.7) {10410}.

A multiplex of markers PPO33 and PPO16 was reliable for selecting genotypes with low PPO activity {10418}.

60. Response to Photoperiod

QTL: Trident (early) / Molineux (late): In addition to an effect associated with chromosome 2B, three QTL were designated as follows: QPpd.agt-1AL (Xwmc304 Xgwm497), QPpd.agt-7AS (Xbarc154 Xbarc108) and XPpd.agt-7BS (Xgwm46 Xgwm333) {10382}. The QTL in chromosome 1A is possibly orthologous to Ppd-H2 in barley.

61. Response to Salinity

61.2. Salt tolerance

QTL: Opata 85 / W7984. 77 QTL effective at different growth stages were mapped to 16 chromosomes {10384}.

63. Response to Vernalization

Replace the existing material in the Vrn-3 section with the following and eliminate the Vrn-B4 section:

Vrn3.

Vrn-B3 {10421}. [Synonymous with Vrn-B4 {279} and Vrn5, eHi{769,771} {769,779}].
7BS {768,769,771}. s: CS (Hope 7B) Vrn-D1a {768}.

v2: Hope Vrn-A1a {1424}.

ma: Vrn-B3 is completely linked to TaFT and 1 cM distal to Xabc158-7B on the region of 7BS proximal to the translocation with homoeologous group 5 {10421}.

The dominant Vrn-B3 allele in Hope has a retrotransposon insertion in the TaFT promoter (GenBank DQ890165) {10421}. Transformation of the winter wheat Jagger with the dominant Vrn-B3 significantly accelerated flowering {10421}. Different Hope seed sources were heterogeneous for this insertion {10421}. The retrotransposon insertion in the TaFT promoter is present in the CS (Hope 7B) {10421}.

Vrn-H3{10421}. [Synonymous to Sh3].

ma: Completely linked to HvFT and 1 cM distal to Xabc158 on 7HS. Originally mapped incorrectly on 1H based on loose linkage {1455, 1316}.

vrn-B3. v: Chinese Spring Vrn-D1 (GenBank DQ890162) {10421}.

In both wheat and barley Vrn-3 is completely linked with a flowering promoter gene homologous to Arabidopsis FLOWERING LOCUS T (FT) {10421}.

Vrn-B4. Synonymous with Vrn3 and will be deleted {10421}.

69. Stem Solidness

Insert introductory note: Solid stem confers resistance to wheat stem sawfly. See also Reaction to Cephus spp.

Qsst.msub-3DL. [Qss.msub-3DL {10395}]. 3DL {10395}.
Associated with Xgwm645-3DL (R² = 0.31), Xwmc656-3DL (R² = 0.1), and Xcfd9-3DL (R² = 0.13) {10395}. This gene acted as an enhancer of Qsst.msub-3BL {10395}.

Tetraploid wheat
Qsf.spa.-3B {10351}. Kyle*2 / Biodur (solid stem) // Kofa (hollow) DH population: Qsf.spa-3BL was located to a 21.3 cM interval flanked by Xgwm247-3B and Xgwm114-3B {10351}. Mapped as a single gene, Xgwm247-3B 6.9 cM Qsf.spa-3B 14.4 cM Xgwm114-3B {10351}. This location was confirmed in two other crosses involving G9580B-FE1C and Golden Ball as the solid stem parents{10351}.

72. Tiller Inhibition

tin3 {10329}. 3A^mL {10329}. dv: T. monococcum subsp. monococcum TA 4443 = TA4342-96 mutant {10329}.

ma: Xbcd131/Xbcd1431-3A 9.6 cM tin3/Xpsr1205-3A 4.7 cM Xcfa2076-3A {10329}.

Proteins

77. Proteins

77.1. Grain protein content

Gpc-B1a. QGpc.ndsu.6Ba {623}.
This allele, fixed in cultivated durum, is a nonfunctional, frame-shift mutation {10438}. A similar nonfunctional allele, or a complete deletion of Gpc-B1, is fixed in hexaploid wheat {10438}.

Gpc-B1b.
Cointinue from 2006 supplement: Gpc-B1, the functional allele {10438} in T. turgidum subsp. dicoccoides, affects senescence and maturity in addition to grain protein content, accelerating senescence and maturity {10298}. Gpc-B1 is a NAC transcription factor designated Nam-B1 {10438}. A paralogous copy of this gene is present in homoeologous group 2 (Nam2).

Add at end of section: Durum: In '3BIL-85 (high protein introgressed from T. turgidum subsp. dicoccoides) / Latino' QTL were detected in chromosomes 2AS (associated with Xcfa2164-2A, R² = 17%), 6AS (Xp39M37₂₅₀-6A, R² = 17%), and 7BL (Xgwm577-7B, R² = 9%) {10338}.

77.2 Enzymes

77.2.1. Acid phosphatase

Acph-D2 {10407}. tv: Aegilops tauschii {10407}.

77.2.32 Phytoene synthase

Psy1-B1. ma: Xcfa2040-7B 12 cM Psy-B1 5 cM Xgwm146-7B {10230}.

Psy2-B1. ma: Xgwm312-5B 17 cM Psy-B2 {10230}.

77.2.34. Polyphenol oxidase

Ppo-A1 {10386}. PPO-2A {10385}. 2AL {10385}.

ma: Detected with STS markers PPO18 (10385) and PPO33 {10418}. Xgwm312-2A 1.4 cM Ppo-A1 5.8 cM Xgwm294-2A {10385}.

Ppo-A1a {10386}.PPO-2Aa EF070147{10385}.

v: Zhongyou 9507 {10385,10386}; others {10386}.

ma: 876 bp wheats with this allele tend to have lower PPO activity {10385, 10386}.

Ppo-A1b {10386}. PPO-2Ab EF070148 {10385}.

v: CA 9632 {0758,10386}, others {10386}.

ma: 685 bp (AY596268) wheats with this allele tend to have lower PPO activity {0758, 10386}.

Ppo-D1 {10386}. 2D {10386}. ma: Detected with primers PPO16 and PPO29. Xwmc41-2D 2.0 cM Ppo-D1 {0759, 10418}.

Ppo-D1a {0759}. EF070149 {10384}.

v: Zhonghou 9507 {0759}; others {0759}.

ma: 713 bp with primer PPO16; wheats with this allele tend to have higher PPO activity {0759}.

Ppo-D1b {0759}. EF070150{0759}.

v: CA 9632 {0759}; others {0759}.

ma: 490 bp with primer PPO29; wheats with this allele tend to have higher PPO activity (0759).

74.2.34. Protein disulfide isomerise (E.C. 5.3.4.1).

Pdi-A1 [{10422}]. 4AL {10422}. v: {10422}.

Pdi-B1 [{10422}]. 4DS {10422}. v: {10422}.

Pdi-D1 [{10422}]. 4BS {10422}. v: {10422}.

The genes for PDI and their promoters were sequenced in {10423}. A related sequence on 1BS was shown to be a partial, nonexpressed copy in {10424}, but not detected in {10409}. PCR-RFLP markers for [TaPDI-4A] and [TaPDI-4B] were designated [Xvut(PDI)-4A] and [Xvut(PDI)-4B] in {10409}. These also were closely associated with Germin (oxalate oxidase {10441}) genes (10409).

Endosperm Storage Proteins

77.3.1.1 Glu-1

Glu-B1

Add:

Glu-B1bn [{10425}]. 7+19 {10425}. v: Triticales: Lasko, Dagno, Tewo, Vision, Dato {10425}.

Glu-B1bo [{10425}]. 7+26 {10425}. v: Triticales: Presto, Modus {10425}.

The number 26 was also used to designate a subunit encoded by Glu-A1k and Glu-A1-1k.

Glu-D1

Add:

Glu-D1br [{10426}]. 5*t+10.1t {10426}. tv: Ae. tauschii TD 81 {10426}.

Glu-E1

HMW glutenin y-type subunit Ee1.5 encoded by this locus was sequenced {10439} and compared with other y-type subunits, particularly subunit 1Dy10. It has major deletions in its middle region and is one of the smallest known HMW-glutenin subunits. It has an additional Cys residue in the middle of the repetitive domain, but lacks one Cys residue commonly found towards the end of this domain. These changes may influence inter- or intramolecular disulphide bond formation.

Add after the Glu-V2 section:

Glu-Ta1 {10449}. al: Taenitherum crinitum PI 204577 {10449}.

Glu-Ta1a [{10449}]. al: Ta. crinitum PI 204577 {10449}.

Glu-Ta1b [{10449}]. al: Ta. crinitum PI 205590 {10449}.

Glu-Ta1c [{10449}]. al: Ta. crinitum PI 561094, Ta. asperum PI 561091, PI 561092 {10449}.

Glu-Ta1d [{10449}]. al: Ta. caput-medusae PI 598389 {10449}.

Glu-Ta1e [{10449}]. al: Ta. caput-medusae PI 577708 {10449}.

Glu-Ta1f [{10449}]. al: Ta. caput-medusae PI 577710 {10449}.

Each allele identified to date encodes two subunits, an x-type and a y-type. The x-type subunits are slower or equal in mobility to subunit Dx2 of wheat, whereas the y-type subunits are faster than subunit Dx12 {10449}. Phylogenetic analysis based upon the sequence of two genes designated Tax and Tay isolated from Ta. crinitum PI 204577 suggest that the Tax subunit was most closely related to Ax1, Cx (Ae. caudata), Ux (Ae. umbellulata) and Dx5, and the Tay subunit to Ay, Cy, and Ry (Secale cereale) {10449}.

Add at the end of the Glu-D1 section:
Subunit 10.1t possesses a mobility slightly lower than subunit 10 in SDS-PAGE, and its deduced amino acid sequence is similar to subunit 12 (eight amino acid differences) {10426}; the authors used the complete coding sequence to make phylogenetic comparisons with 19 other subunits including both x-type and y-type subunits and concluded that the Glu-1 gene duplication event probably occurred about 16.83 million years ago.

77.5.6 Waxy proteins

Following the formal gene lists, the paragraph 'Various hard and soft wheats ................' Add: 'Fifteen percent of Chinese wheats possessed Wx-B1 null alleles {10357}.'

To the string of references in the following paragraph add: ',10437'}.

77.5.8. Puroindolines and grain softness protein

Pina-D1. After CS, add: (GenBank DQ363911) {03108}. Capitole (GenBank X69914) {03110}.

Pina-D1a. add: v: Capitole (GenBank X69914) {03110}; Renan (GenBank CR626934) {10440}.

dv: Ae. tauschii unidentified accession (GenBank AJ249935) {03103}; Ae. tauschii CPI 10799 (GenBank CR626926) {10440}.

Pina-D1b. add: i: PI 644080 (Alpowa / ID377s // 7*Alpowa) {10429}.

v: Glenlea (GenBank AB262660) {10431}.

This allele is now defined as a 15,380 bp deletion versus other possible puroindoline a nulls {10428, 10391}.

Pina-D1c. add: dv: Ae. tauschii TA10 (GenBank AY649746) {03108}.

Pina-D1d. add: dv: Ae. tauschii TA1704 (GenBank AY649744) {03108}.

Pina-D1k. add: homonym: Pina-D1b/Pinb-D1h(t):

v: Bindokku {10305}; Cheyenne-A {10305}; Chosen 68 {10305}; Gaiyuerui {10316}; KT020-584 {10432}; Saiiku 18 {10305}; Saiiku 44 {10305}; Sifangmai {10316}; Tachun 2 {10316}; ZM2851 {10316}; ZM2855 {10316}.

This allele is currently used to denote a large deletion of undetermined size that involves Pina-D1, Pinb-D1, and Gsp-D1 {10077}. The deletion of both puroindolines is associated with harder kernel texture than other known puroindoline hardness alleles {10077, 10305, 10432}.

Pina-D1m. Revise ref. {101208} in the 2005 Supplement to {10208}.

Pina-D1n v: Hongheshang, add: (GenBank EF620907) {10208}.

v: Xianmai, add: (GenBank EF620908) {10208}.

New entries:

Pina-D1q {10316}. v: U29 (GenBank AB181238) {10316}; u-27 (homonym 'a2', Pina-D1p) {10316}.

Pinb-D1. Change '(GenBank X69914)' to '(GenBank X69912)'.

Pinb-D1b. add: i: PI 644081 (Alpowa / ND2603 // 7*Alpowa) {10429}.

v: Cheyenne (GenBank DQ363914) {10315}; Renan (GenBank CR626934) {10440}.

Pinb-D1c. add: i: PI 644082 (Alpowa / Red Bobs // 7*Alpowa) {10429}.

Pinb-D1d. add: i: PI 644083 (Alpowa / Mjølner // 7*Alpowa) {10429}.

add: v: Soissons (homonym 'b1') {10433}.

Pinb-D1e. add: i: PI 644084 (Alpowa / Canadian Red // 7*Alpowa) {10429}.

add: v: Yunxianxiaomai {10427}.

Pinb-D1f. add: i: PI 644085 (Alpowa / Sevier // 7*Alpowa) {10429}.

add: v: Abyssinia AV12.4 {10430}.

Pinb-D1g. add: i: PI 644086 (Alpowa / Andrews // 7*Alpowa) {10429}.

Pinb-D1h. add: dv: TA10 (GenBank AY649748) {03108} CPI110799 (GenBank AY159804) {10037}.

Pinb-D1i. add: dv: Ae. tauschii TA1704 and TA2381 (GenBank AY649747) {03108, 10315}; Ae. tauschii isolate Q03-002 (GenBank DQ257553) (referred to as allele 2) {10314}; Ae. tauschii CPI 110799 (GenBank CR626926) {10440}. Q03-002, TA1704, and TA2381 were incorrectly assigned Pinb-D1w in the 2006 supplement.

Pinb-D1j. add: dv: Ae. tauschii TA1691 (GenBank AY251946) {03108}.

Pinb-D1l. add: Note: {10208} reported Pinb-D1b in Gaocheng 8901.

Pinb-D1p. Change reference '{10121}' in three places under this heading to '{10208}'.
Add note: The single nucleotide A deletion occurs in the AAAA at position 210-213 and is assigned to the last position at 213.

add: homonym: Pinb-D1i(t) {10305}.

v: Qindao landrace 1{10305}; Qitoubai {10305}; Shijiazhuang 34 {10305}; Zigan {10305}.

This homonym sequence (allele) was incorrectly assigned Pinb-D1v in the 2006 supplement.

add: homonym: Pinb-D1z, 'b3', Pinb-D1u.

v: Dahuangpi (GenBank AY581889) {10316}.

Pinb-D1q. v: Jingdong 11 (GenBank EF620909){10313}.

This allele was used originally (2004 Supplement) in combination with Pina-D1k and Gsp-D1i to denote the large deletion that encompasses Pina-D1, Pinb-D1, and Gsp-D1 {10077} (cf. Pina-D1k). The haplotype nomenclature of this deletion is under review; Pinb-D1q is currently used to denote the C-to-G SNP at position 218 {10313}.

Pinb-D1t. add after Guangtouxiamai: (GenBank EF620910).
Pinb-D1u. add after Tiekemai: (GenBank EF620911).
Pinb-D1v. v: Tachun 3 {10316}, homonym 'b5' {10316}.

The original assignment of this allele in the 2006 supplement was incorrect; the sequence/varieties in {10305} are Pinb-D1p as listed above for that allele. The following variety/sequence was assigned Pinb-D1y in the 2006 supplement; but the original assignment of {10316} is now unchanged.

Pinb-D1w add: v: Jing 771 (GenBank AY640304, AB180737){10316}, homonym 'b4' {10316}.

This variety/sequence was incorrectly assigned Pinb-D1x in the 2006 supplement; the original assignment of {10316} is now unchanged.

Ae. tauschii isolate Q03-002 (GenBank DQ257553) (referred to as allele 2) {10314}; Ae. tauschii TA1704 and TA2381 (GenBank AY649747){10315}; Ae. tauschii CPI 110799 (GenBank CR626926) {10440} were incor rectly assigned this allele in the 2006 supplement; they are Pinb-D1i as listed above.

Pinb-D1x.

The original assignment of this allele in the 2006 supplement was incorrect; the sequence for Jing 771 {10305} is Pinb-D1w as listed above. Currently there is no assignment for this allele.

Pinb-D1y.

The original assignment of this allele in the 2006 supplement was incorrect; the sequence for Tachun 3 in {10305} is Pinb-D1v as listed above. The original assignment of {10316} is now unchanged. Currently there is no assignment for this allele.

Pinb-D1z.

This allele/sequence is identical to, and listed under Pinb-D1p. Currently there is no assignment for this allele.

New entries:

Pinb-D1u {10427}. v: Tiekamai) {10427}; 31 hard Yunnan endemic wheats (T. aestivum subsp. yunnanense King) {10427}.
Possesses a G deletion at position 127 leading to a shift in ORF {10427}.
Pinb-D1aa {10391}. v: Changmangtoulongbai (GenBank EF620912) {10391}; Hongtutou 1 {10391}; Hongtutou 2 {10391}.
Pinb-D1ab {10432}. v: KU3062 {10432}; KU3069 {10432}.

77.5.9. Grain softness protein

Gsp-D1i. Change reference '{10120}' to '{03105}' in two places.

77.7.1 Polygalacturonidase-inhibiting proteins

PGIPs are LRR proteins involved in plant defence as inhibitors of fungal polygalacturonases {10390}.

Pgip1 {10390}. 7BS {10390}. v: CS ditelo 7BL {10390}.

v2: Chinese Spring Pgip2 {10390}.
tv: Langdon {10390}.

Pgip2 {10390}. 7DS {10390}. v: CS ditelo 7DL {10390}.

v2: Chinese Spring Pgip1 {10390}.

Pathogenic Disease/Pest Reaction

79. Reaction to Blumeria tritici

79.1. Designated genes for resistance

33 NILs, including 22 resistance genes and three genetic backgrounds are listed in {10389}.

Pm2. ma: Xcfd81-5D - 2.0 cM - Pm2 {10366}.

Pm3.

Add note at beginning of section: Following the cloning and sequencing of Pm3d {10064}, six other alleles were sequenced {10405}. The Chinese Spring (susceptible) allele, Pm3CS, considered to be ancestral and present in many hexaploid and tetraploid wheats was also transcribed {10405, 10406}. Other wheats possessed a truncated sequence (e.g., Kavkaz), or were null {10405, 10406}. Unique markers were developed for all eight transcribed alleles and for individual alleles {10405}.

Pm3b. Pm3j{10405}.

Pm3c. Pm3i {10405}. Sequence DQ251587, DQ517917 {10405}.

Pm3d. Pm3h {10405}. Sequence DQ251488, DQ517518 {10405}.

Pm3e.

Pm3g. Sequence DQ251489, DQ517919 {10405}.

Pm3h. Delete and add to Pm3d.

Pm3i. Delete and add to Pm3c.

Pm3j. Delete and add to Pm3b.

Genotype list for Pm3: Add: {',10405, 10406'}

Pm35 {10342}. 5DL {10342}. v: NC96BGTD3 = PI 603250 = Saluda*3 / TA2377 {10342}.

dv: Ae. tauschii ssp. strangulata TA2377 {10342}.

ma: Xcfd26-5D 11.9 cM Pm35 {10342}.

Pm36 {10356}. 5BL {10356}. tv: MG-FN14999, a durum backcross line 5BIL-29 {10356}: T. turgidum subsp. dicoccoides MG29896 {10356}.

ma: Less than 15 cM linkage with three SST and one EST-SSR markers on chromosome 6BL {10356}.

Pm37 {10372}. 7AL {10372,10274}. v: NC99BGTAG11 = T. timopheevii subsp. ameniacum {10372}.

tv: PI 427315 = T. timopheevii subsp. ameniacum {10372}.

ma: Pm37 (PmAG11) was about 15 cM proximal to a cluster of markers that earlier co-segregated with Pm1 {10372}. A cross indicated linkage between Pm37and Pm1 {10372}.

Pm38 {10373}. Adult plant resistance. 7DS {10374}.

i: RL6058 = Tc*6 / PI58458 {10374}.

v: Lines with Lr34/Yr18 see Reaction to Puccinia triticina, Reaction to Puccinia striiformis.

ma: Xgwm1220-7D 0.9 cM Lr34/Yr18/Pm38 2.7 cM {10374}. See also Reaction to Puccinia triticina, Reaction to Puccinia striiformis.

79.3. Temporary designated genes for resistance to Blumeria graminis

Mlm3033{10393}. 7AL {10393}. dv: T. monococcum subsp. monococcum TA2033 {10393}.

ma: Xmag1757/Xmag2185 2.7 cM Mlm2033/Xmag2185 1.3 cM Xgwm344-7A {10393}; Xmag1757 5.9 cM Mlm2033/mag2185/Xgwm344/Xgwm146-7A 4.7 cM Xmag1986 {10393}; Xmag1757/Xmag1714/Xmag1759 Mlm2033 0.9 cM Xmag2185/Xgwm344-7A {10393}.

Mlm80 {10393}. 7AL {10393}. dv: T. monococcum subsp. aegilopoides M80 {10393}.

ma: Xmag1757/Xmag1759 3.6 cM Mlm80 0.7 cM Xmag2166/Xgwm344-7A {10393}.

Mlm2033 and Mlm80 appeared to be allelic and their relative locations suggest they are allelic with Pm1 {10393}.

PmY39 {10367}. 2U(2B) {10367}. su: Laizhou 953*4 / Am9 (Am9 = Ae. umbellulata Y39 / T. turgidum subsp. carthlicum PS5) {10367}.

dv: Ae. umbellulata Y39 {10367}.

ma: Associated with 2U markers Xgwm257, Xgwm296, and Xgwm319 {10367}.

79.4. QTL for resistance to Blumeria graminis

Add at end of section:

Fukuho-Komugi / Oligoculm, DH population. QTL for adult-plant resistance located on 1AS (R² = 22%, Pm3 region, Xgdm33 Xpsp2999), 2BL (R² = 8%, Xwmc877.1 Xwmc435.1), and 7DS (R² = 10%) derived from Fukuho-komugi, and 4BL (R² = 6% at one of two sites, Xgwm373-Xgwm251) from Oligoculm {10335}. The QTL on 7DS, flanked by Xgwm295.1-7D and Ltn, is likely to be Lr34/Yr18.

CI 13227 (S) / Suwon 92 (R), SSD population: APR (field resistance) was closely associated with Hg, Xpsp2999-1A and Xpm3b.1 and Xpm3B.2 designed from the Pm3b sequence {10340}.

RE9001 (R) / Courtot (S) RIL population: QPm.inra.2B (R² = 10.3 36.6 %), in the vicinity of Pm6, was consistent over environments {10360}. Eleven QTL, detected in at least one environment were identified by CIM {10360}.

XX. Reaction to Cephus cinctus

Pest: Wheat stem sawfly. North American species C. cinctus; European species C. pygmeus. Resistance to wheat stem sawfly is associated with solid stem (see also: Stem solidness).

Tetraploid wheat

Qsf.spa-3B {10351}. See Stem Solidness.

81. Reaction to Diuraphis noxia

Dn4. i: Yumar {10397}.

v: Ankor {10397}; Prairie Red {10397}.

Dn5. Add ref 10396 to 7DL.

Add note: 'Genetic mapping indicated that Dn5 is located in chromosome 7DS, but cytological analysis showed it was located in 7DL {10396}. It also was suggested {10396} that the Palmiet Dn5 line {0004} may not have Dn5 {10396}.'.

82. Reaction to Fusarium spp.

82.1. Disease Insert: 'Fusarium head blight' as an additional disease name. Fusarium head scab, scab

Fhb1 {add: ',10403'}. i: HC374 / 3*98B69-l47 {10214}; Sumai 3*5 / Thatcher {10214}.

v: HC-l47-126 {10444}.

v2: BW278 Fhb2 {10225}; Sumai 3 Fhb2 10314}.

ma: XSTS3B-80 0.2 cM Fhb1 1.1 cM XSTS3B-142 {10214}. Placed in a 1.2-cM interval flanked by XSTS3B-189 and XSTS3B-206 {10403}.

The relationship of Fhb1 to Fhs1 or Fhs2 {1096}is unknown.

Fhb2. Change '6B' to '6BS'. v: pbE85 {10444}.

v2: Sumai 3 Fhb1 {10225}.
ma: Change present entry to: 'gwm133-6B 4 cM Fhb2 2 cM Xgwm644-6B {10225}.'

Add note: The relationship of Fhb2 to Fhs1 or Fhs2 {1096}is unknown.

In the third paragraph following the listing of Qfhs.ifa-5A (relates to Ning 7840 / Clark) add: Three RGA sequences putatively assigned to chromosome 1A explained 3.3712.73% of the phenotypic variation in FHB response among F7 and F10 populations {10364}. STS marker FHBSTS1A-160 was developed from one of the RGA.

Following the entry for 'Frontana / Remus' add:

'Frontana (MR) / Seri 82 (S)', F3 and F3:5 populations: QTL were located in chromosomes 1BL (R² = 7.9%), flanked by AFLP markers, 3AL (R² = 7.7%), flanked by Xgwm720-3A and Xgwm121-3A , 7AS (R² = 7.6%), flanked by an AFLP and Xgwm233-7A {10349}.

Following 'Wangshuibai /Alondra' add:

'Wangshuibai / Annong 8455': RIL population: CIM analysis over 2 years detected QTL for FHB response on chromosomes 3B (R² = 0.17) and 2A (R² = 0.12), and for DON levels in 5A (R²= 0.13), 2A (R² =0.85), and 3B (R² = 0.06) {10447}. The regions involved were Xgwm533.3B Xbarc133-3B, Xgwm425-2A, and Xgwm186-5A Xgwm156-5A {10447}.

In a reciprocal backcross analysis of' Chris monosomics / Frontana', Frontana chromosomes 3A, 6A, and 4D reduced visibly diseased kernels, kernel weight and DON content, whereas Frontana chromosomes 2A, 2B, 4B, and 7A increased the same traits {10398}.

At end of section add:

Tetraploid wheat

Qfhs.crc-2BL {10445}. tv: Strongfield {10445}.

ma: Spanning 16 cM, this QTL peaking on Xgwm55-2B explained 23% of the phenotypic variation {10445}.

Qfhs.ndsu-3AS {10402}. sutv: LDNDIC3A {10402}.

tv: T. turgidum subsp. dicoccoides {10402}.

ma: Located in an interval spanning 29.3 cM, this QTL accounted for 37% of the phenotypic variation; peak marker, Xgwm2-3A {10402}.

Qfhs.crc.6BS {10445}. tv: T. turgidum subsp. carthlicum cv. Blackbird {10445}.

ma: Spanning 23 cM and peaking on Xwmc397, this QTL accounted for 23% of the phenotypic variation {10445}.

Qfhs.fcu-7AL {10401}. sutv: LDNDIC 7A {10401}.

tv: T. turdidum subsp. dicoccoides PI 78742 {10401}.

ma: Located in an interval spanning 39.6 cM, this QTL accounted for 19% of the phenotypic variation in a RIL population of 'Langdon / LDNDIC 7A'; nearest marker Xbarc121-7AL {10401}.

'Strongfield / T. turgidum subsp. carthlicum (Blackbird)': Field resistance identified in chromosome 2BL (Xgwm55-2B), and 6BL (Xwmc397-6B) (coincident with Fhb2 {10225}).

82.2. Disease: Crown rot caused by Fusarium pseudograminearum, F. culmorum and other Fusarium species.

Add: W21MMT70 / Mendos: DH population: three consistent QTL for seedling resistance were identified with CIM; there were located in chromosomes 5D and 2D (resistance alleles from W21MMT70) and 2B (resistance allele from Mendos) {10358}.

83. Reaction to Heterodera avenaeWoll.

Cre5. v: Continue present text with: However a contribution of the Cre5 region was detected in 'Trident / Molineux' {10343}.

ma: Associated with the Xgwm359-2A (R² = 8%) - Xwmc177-2A (R² = 7%) region in 'Trident / Molineux' {10343}.

Cre8. ma: Associated with the Xgdm147-6B (R²=24%) - Xcdo247-6B (R² = 12%) region in 'Trident / Molineux' {10343}.

QTL: Qcre.srd-1B was located to the Xwmc719-1B (R² = 12%) Xgwm140-1B (R² = 12%) region in 'Trident / Molineux' (10343).

85. Reaction to Mayetiola destructor

H13. 6DS {10388}. v: PI562619 {10388}; SW34 = Langdon / Ae. tauschii RL 5544 {10388}.

ma: Xcfd132-6D 3.7 cM H13 {10388}.

H22. 1D {1199}, 1DS {10381}.

v: KS85WGRC01 = Ae. tauschii TA1644 / Newton // Wichita {1199}; PI572542 {10388}.

ma: Xgdm33-1D 1.0 cM H22 0.3 cM Xhor2KV-1D 0.5 cM Xgpw7082-1D {10381}.

H23. v: PI535766 {10388}.

H24. v: PI535769 {10388}.

H26. 3DL {10388}. v: SW8 = Langdon / Ae. tauschii Clae 25 {10388}.

ma: Xcfd211-3D 7.5 cM H26 2.9 cM Xwgc7330-3D  4.0 cM Xgwm3-3D {10388}.

84. Reaction to Mycosphaerella graminicola

Stb6. v: Amigo {10448}; Arina {10448}; Amada {10448}; Atlas 66 {10448}; Ble Seigle {10448}; Bon Fermier {10448}; Chinese Spring {10448}; Gene {10448}; Heines Kolben {10448}; Hereward {10448}; Poros {10448}; Senat {10448}; Shafir m{10448}; Tadinia {10448}.

v2: Bulgaria 88 Stb1 {10448}. Veranopolis Stb 2 {10448}. Israel 493 Stb3{10448}.

Stb10. 1D. Kavkaz-4500 L.6.A.4.

Stb11. 1BS. v: TE9111, JIC W 9996.

Stb12. 4AL. Kavkaz-4500 L.6.A.4.

Stb13 {10347}. Confers resistance to Canadian cultures MG96-13 and MG2 {10347}.

7BL {10347}. v: DH line 90S05B*01 {10347}; DH line 98S08C*03 {10347}.

v2: Salamouni Stb14 {10347}.

ma: Xwmc396-7B 9 cM Stb13 10347}; Xwmc396-7B 7 cM Stb13 {10347}.

Stb14 {10348}. Confers resistance to Canadian isolate MG2 but not to MG96-13 {10347}.

3BS {10348}. v: DH line 98S08A *09 {10348}.

v2: Salamouni Stb13 {10347}.

ma: Xwmc500-3B 2 cM Stb14 5 cM Xwmc632-3B {10348}.

Stb15 {10341}. Confers resistance to Ethiopian culture IPO88004 {10341}.

6AS {10341}. v: Riband {10341}.
v2: Arina Stb6 {10341}.
ma: Stb15 14 cM Xpsr904-6A {10341}.

QTL: A weak QTL, QStb.psr-7D.1, giving partial resistance to Portuguese isolate IPO92006, was detected in the Xcdo475b-7B Xswm5-7B region in chromosome 7DS {10341}.

89. Reaction to Phaeosphaeria nodorum (E. Muller) Hedjaroude (anamorph: Stagonospora nodorum (Berk.) Castellani & E.G. Germano).

89.2. Sensitivity to SNB toxin

Replace or update present entries with the following:

Snn1 {10008}. Sensitivity to toxin SnTox1 is dominant {10008}. 1BS {10008}.

s: CS- DIC 1B {10008}.

v: CS {10008}; Grandin {10008}; Kulm {10008}; ND 495 {10008}.

ma: Snn1 4.7 cM XksuD14-1B {10008}.

snn1. v: Br34 {10008}; Erik {10008}; Opata 85 {10008}.

QTL: ITMI population: A major QTL, coinciding with Snn1, was located in chromosome 1BS (R² = 0.58, 5 days after inoculation); minor QTL were found in 3AS, 3DL, 4AL, 4BL, 5DL, 6AL, and 7BL (10009).

90. Reaction to Puccinia graminis

Sr31. ma: A SCAR marker, SCSS30.2₅₇₆ was developed {10359}.

91. Reaction to Puccinia striiformis

91.1. Designated genes for resistance to stripe rust

Yr3a. i: Taichung 29*6 / Vilmorin 23 {10370}. Yr3 (YrV23) Xwmc356-2B, 9.4 cM {10370}.

Yr5. ma: Co-segregation with AFLP marker S19N93-140 and 0.7 cM with S23M41-310 {10435}.

Yr7. i: Taichung 29*6 / Lee {10371}.

ma: Yr7 Xgwm526-2B, 5.3 cM {10371}.

Yr9. ma: Yr9 3.7cM Xgwm582-1BL {10365}.

Yr15. v: Boston {0330}; Cortez {0330}; Legron {0330}.

Yr17. v: Kris {10336}.

ma: Characterized by null alleles for Xwmc382-2A and Xwmc407-2A {10336}.

Yr24. YrCH42. v: Chuanmai 42 {10339}; Synthetic 769 {10339}.

tv: Decoy 1 {10339}.

ma: Xbarc187-1B 2.3 cM Yr24 1.6 cM Xgwm498-1B {10339}.

Yr24 is identical to Yr26 {10339, 939}.

Yr26.

Yr26 is identical to Yr24 {10339, 939}.

Yr32. v: Deben {10336}.

Yr34. Change to: v: AUS22857 {10040}; WAWHT2046 = AUS91389 {10040}.

ma: Change current entry to: 'Xgwm410.2-5A 8.2 cM B1 12.2 cM Yr34 {10040}'.

Yr39 {10416}. HTAP resistance. 7BL {10416}.

v: Alpowa {10416}.

ma: Closely linked to several RGAP markers {10416}.

Yr40 {10328}. Derived from Aegilops geniculata. 5DS (5DL·5DS-T5MS^G {10328}.

v: TA5602 {10328}; TA5603 {10328}.

al: Ae. geniculata (= ovata) (U^sU^sM^gM^g ) TA10437 (10328).

ma: Completely linked with distinctive alleles of Gsp, Xfbb276, and Xbcd873 {10328}.

Completely linked with Lr57 {10328}.

At end of section add: Genotype list: Chinese common wheats {10369}.

Yr1Ap {10416}. 1BS {10416}. v: Alpowa Yr39{10416}.

ma: YrAlp 15.2 cM Xgwm18-1B 1.1 cM Xgwm11-1B (10416) and more closely linked to RGAP markers {10416}.

YrSp {10352}. YrSp {10353}. 2B {10352, 10353}, probably 2BL.

i: 'Avocet*3 / Spaldings Prolific' {10353}; 'Taichung*6 / Spaldings Prolific' {10352}.

v: Spaldings Prolific {10352, 10353}.

ma: YrSp Xwmc-2B 12.1cM {10352}.

YrV23 {10370}. Presumed to be Yr3a. v: Vilmorin 23 {10370}.

YrZH84 {10331}. 7BL {10331}. v: Annong 7959 {10331}; Zhoumai 11 {10331}; Zhoumai 12 {10331}.

v2: Zhou 8425B Yr9 {10331}.

ma: Xwmc276-7B 0.6 cM Xcfa2040-7B YrZH84 4.8 cM Xbarc32-7B {10331}.

Yrns-B1. ma: As a QTL, Yrns-B1 was located in a 3 cM interval between Xgwm493-3B and Xgwm1329-3B {10383}.

91.3. Stripe rust QTLs

Multi-cross analyses detected QTL in chromosomes 2AS (Yr17), 2AL (Yr32), 2BL (Yr5/Yr7) region, and 6BL {10336}.

'Avocet S / Pavon76': QTL identified in 1BL (Xgwm259), 3BS (PstAATMseCAC2), 4BL (Xgwm495), 6AL (Xgwm617), 6BL (PstAAGGMseCGA1) {10443}.

92. Reaction to Puccinia triticina

92.1. Genes for resistance

Lr1. ma: Add: 'Mapped to a 0.7 cM interval in Ae. tauschii and a 0.075 cM interval in wheat {10408}.

A candidate gene for Lr1, Lr1RGA1, encoding a CC-NBS-LRR protein co-segregated with Lr1 {10408}.'.

Lr3c. v: Blava {10345}.

Lr10. ma: Lr10 was cloned it has a CC-NBS-LRR structure, syn, T10rga1 GeneBank AY270157 {10442}.

Lr17a. v: Jagger {10346}.

Lr17b. v2: Contra Lr13 {10345}; Kalasz Lr13 {10345}; Riband Lr13 {10345}; Sarka Lr13{10345}.

Lr19. ma: RAPD, SCAR and SSR markers co-inciding with, or flanking, Lr19 in a derivative of Knott's Agatha Mutant 28 (C80.1) were reported in {10379}.

Lr21. Lr40 {1200, 10415}.

v2: WGRC16 = 'TAM107*3 / Ae. tauschii TA 2460' Lr39 {220, 10415}.

dv: Ae. tauschii TA2460 Lr39 {220, 10415}.

ma: Xksu-1D is part of Lr21 {10420}. Lr21 was cloned and shown to have a NBS-LRR structure {10420}.

Lr22a. ma: Xgwm296-2DS 2.0 cM Lr22a {10446}.

Lr24. ma: SCAR markers were developed in {10368}

Lr34. v: Arina*3/Forno {10380}; Bezostaya {10387}; Condor {10387}; Cook {10387}; Forno {10066, 10380, 10387}; Fukuho-Komugi {10387}; Otane {10387}.

ma: Lr34XsfrBF473324 0.5 cM Xsfr.cdo475-7D 0.7 cM Xswm10-7D {10380}. A 150-bp allele (b) of STS CsLV34, derived from wEST BQ788742 was identified in most wheats with Lr34; CsLV34a 0.4 cM Lr34 {10387}.

Lr39. Add existing v: and dv: entries from Lr41 and add ',10415' after each reference.

v2: WGRC16 = 'TAM107*3 / Ae. tauschii TA 2460' Lr39 {220, 10415}.

dv: Ae. tauschii TA2460 Lr21 {220, 10415}.

Lr40 {1200}. Deleted. Shown to be Lr21 {10415}.

Lr41 {215}. Deleted. Shown to be Lr39 {10415}.

Lr43 {218}. Deleted. WGRC16 shown to have Lr21 and Lr39 {10415}.

Lr57 {10328}. Derived from Aegilops geniculata. 5DS (5DL·5DS-T5MS^G {10328}.

v: TA5602 {10328}; TA5603 {10328}. Since TA5602 and TA5603 are fourth backcross selections to WL711, they likely also carry Lr13.

al: Ae. geniculata (= ovata) (U^SU^SM^GM^G TA10437) {10328}.

ma: Completely linked with distinctive alleles of Gsp, Xfbb276 and Xbcd873 {10328}.

Completely linked with Yr40 {10328}.

Lr58 {10375}. Derived from Aegilops triuncialis. 2BL {10375} = T2BS·2BL-2^tL(0.95).

v: TA5605 = WL711*4 / Ae. triuncialis TA10438 Lr13 {10375}.

al: Ae. triuncialis TA10438 {10375}.

ma: TA5605 possesses Ae. triuncialis alleles of RFLP markers XksuH16, XksuF11 and Xbg123 in the terminal region of chromosome 2BL {10375}.

Lr59 {10399}. 1AL (probable centric fusion {10399}.

v: Line 0306 {10399} = Ae. peregrina-680 / 2*CS // 5*W84-17 {10399}.

al: Ae. peregrina (UUSS, 2n = 28) 680 {10399}.

Lr60 {10400}. LrW2 {0305}. 1DS {10400}.

v: RL6172 {0305} = Thatcher*3/V860.

At the end of section: Under Genotype lists; to references after European cultivars add: {',10345'}.

92.3. QTLs for reaction to P. triticina

Avocet S / Pavon76: QTL identified included: 1BL (PstAFAMseCAC1&2), 4BL (Xgwm368), 6AL (Xgwm617), and 6BL (PstAGGMseCGA1) {10443}.

93. Reaction to Pyrenophora tritici repentis (anomorph: Drechlera tritici-repentis)

93.1. Insensitivity to tan spot toxin

tsn1. ma: Replace the last entry with: Xfgcg7-5B 0.4 cM Tsn1/Xfcg17-5B 0.2 cM Xfcg9-5B {10207}; Xfcg17-5B 0.2 cM Tsn1 0.6 cM Xfcg9-5B {10207}; Xfcp1-5B and Xfcp2-5B delineated Tsn1 to an interval of about 1 cM {10337}. Tsn1 was placed in a 2.1 cM region spanned by XBF483506 and XBF138151.1/XBE425878/Xfcc/XBE443610 {10413}.

Add note: According to {10376} the same dominant allele, presumably tsn1, conferred resistance to chlorosis induced by races 1 and 3 in cultivars Erik, Hadden, Red Chief, Glenlea and 86ISMN 2137 in crosses with 6B-365.

Tsn2 {10344}. Conditions resistance to race 3 {10344}. 3BL {10344}.

sutv: LDN (DIC-3B) {10344}.

tv: T. turgidum no. 283, PI 352519 {10344}; T. turgidum subsp. dicoccoides Israel-A {10344}.

ma: Identified as a QTL in region Xgwm285-3B - Xwmc366.2-3B (R2 = 91%) {10344}. Also classified as a single gene: Xgwm285-3B 2.1 cM tsn2 15.2 cM Xwmc366.2-3B {10344}.

tsn3 {10394}. 3D {10394}, 3DS {10419}.

v: XX41 = [Langdon / Ae. tauschii CI 00017] {10394}; XX45 {10394}; XX110 {10394}.

dv: Ae. tauschii CI 00017 {10394}.

ma: Xgwm2a tsn3, 15.3 cM, 14.4 cM, and 9.5 cM in CS / XX41, CS / XX45, and CS /XX110, respectively {10419}.

Resistances in XX41 and XX110 were recessive whereas that in XX45 was dominant all three were hemizygous-effective {10394}. The genes were given different temporary designations {10394, 10419}, but all will be considered to have a common gene until they are shown to be different.

tsn4 (10350). Resistance to race 1 (culture ASC1a) {10350}. 3A {10350}.

v: Salamouni {10350}.

REFERENCES

Update.

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03105. Massa AN, Morris CF & Gill BS 2004 Sequence diversity of puroindoline-a, puroindoline-b and the grain softness protein genes in Aegilops tauschii Coss. Crop Science 44: 1808-1816. 10064. 47:85-98. 10008. Change '2003' to '2004' and 'Abstr.' to ' Phytopathology 94: 1056-1060.
10009. Change title and location to: Quantitative trait loci analysis and mapping of seedling resistance to Stagonospora nodorum leaf blotch in wheat. Phytopathlogy 94: 1061-1067.
10040. Bariana HS, Parry N, Barclay IR, Loughman R, McLean RJ, Shankar M, Wilson RE, Willey NJ & Francki M 2006 Identification and characterization of stripe rust resistance gene Yr34 in common wheat. Theoretical & Applied Genetics 112: 1143-1148.
10118. Gedye KR, Morris CF & Bettge AD 2004 Determination and evaluation of the sequence and textural effects of puroindoline a and puroindoline b genes in a population of synthetic hexaploid wheat. Theorerical & Applied Genetics 109: 1597-1603.
10120. Delete, duplicates 03105.
10121. Delete, duplicates 10208.
10122. Chantret N, Cenci A, Sabot F, Anderson O & Dubcovsky J 2004 Sequencing of the Triticum monococcum hardness locus reveals good microcolinearity with rice. Molecular & General Genomics 271: 377-386. 10214. 2006. Theoretical & Applied Genetics 112: 1465-1472.
10224. Change to 2006. In title change Triticum sharonense to Aegilops sharonensis. Euphytica 149: 373-380. 10225. Replace present reference with: Cuthbert PA, Somers DJ & Brule-Babel A 2007 Mapping of Fhb2 on chromosome 6BS: a gene controlling Fusarium head blight field resistance in bread wheat (Triticum aestivum L.). Theretical & Applied Genetics 114: 429-437.
10230. Update to: Pozniak CJ, Knox RE, Clarke FR & Clarke JM 2007 Identification of QTL and association of a phytoene synthase gene with endosperm colour in durum wheat. Theoretical & Applied Genetics 114: 525-537.
10241. Update: Miranda LM, Murphy JP, Leath S & Marshall DS 2006 Pm34: a new powdery mildew resistance gene transferred from Aegilops tauschii Coss. to common wheat. Theoretical & Applied Genetics 113:1497-1504.
10290. Replace present entry with: Sun DJ, He ZH, Xia XC, Zhang LP, Morris CF, Appels R, Ma WJ & Wang H 2005 A novel STS marker for polyphenol oxidase activity in bread wheat. Molecular Breeding 16: 209-218. 10302. Add '6' to the year of publication, i.e. '2006'.
10303. Journal of Cereal Science 45: 67-77. 10316. Chang C, Zhang H, Xu J, Li W, Li G, You M & Li B 2006 Identification of allelic variations of puroindoline genes controlling grain hardness in wheat using a modified denaturing PAGE. Euphytica 152: 225-234.

New.

10328. Kuraparthy V, et al. 2007. Personal communication.
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10330. Torada A, Koike M, Mochida K & Ogihara Y 2006 SSR-based linkage map with new markers using an intraspecific population of common wheat. Theoretical & Applied Genetics 112: 1042-1051.
10331. Li ZF, Zheng TC, He ZH, Li GQ, Xu SC, Li XP, Yang GY, Singh RP & Xia XC 2006 Molecular tagging of stripe rust resistance gene YrZh84 in Chinese wheat line Zhou 8425B. Theoretical & Applied Genetics 112: 1089-1103.
10332. Xing QH, Ru ZG, Zhou CJ, Xue X, Liang CY, Yang DE, Jin DM & Wang B 2003 Genetic analysis, molecular tagging and mapping of the thermo-sensitive gene (wtms1) in wheat. Theoretical & Applied Genetics 107: 1500-1504.
10333. Guo RX, Sun DF, Tan ZB, Rong DF & Li CD 2006 Two recessive genes controlling thermophotoperiod-sensitive male sterility in wheat. Theoretical & Applied Genetics 112: 1271-1276.
10334. Chu C-G, Faris JD, Friesen TL & Xu SS 2006 Molecular mapping of hybrid necrosis genes Ne1 and Ne2 in hexaploid wheat using microsatellite markers. Theoretical & Applied Genetics 112: 1374-1381.
10335. Liang SS, Suenaga K, He ZH, Wang ZL, Liu HY, Wang DS, Singh RP, Sourdille P & Xia XC 2006 Quantitative trait loci mapping for adult-plant resistance to powdery mildew in bread wheat. Phytopathology 96: 784-789.
10336. Christiansen MJ, Feenstra B, Skovgaard IM & Andersen SB 2006 Genetic analysis of resistance to yellow rust in hexaploid wheat using a mixture model for multiple crosses. Theoretical & Applied Genetics 112: 581-591.
10337. Lu HJ, Fellers JP, Friesen TL, Meinhardt SW & Faris JD 2004 Genomic analysis and marker development for the Tsn1 locus in wheat using bin-mapped ESTs and flanking BAC contigs. Theoretical & Applied Genetics 112: 1132-1142.
10338. Blanco A, Simeone R & Gadaleta A 2006 Detection of QTLs for grain protein content in durum wheat. Theoretical & Applied Genetics 112: 1195-1204.
10339. Li GQ, Li ZF, Yang WY, Zhang Y, He ZH, Xu SC, Singh RP, Qu TT & Xia XC 2006 Molecular mapping of stripe rust resistance gene YrCH42 in Chinese wheat cultivar Chuanmai 42 and its allelism with Yr24 and Yr26. Theoretical & Applied Genetics 112: 1434-1440.
10340. Xu X-Y, Bai G-H, Carver BF, Shaner GE & Hunger RM 2006 Molecular characterization of a powdery mildew resistance gene in wheat cultivar Suwon 92. Phytopathology 96: 496-500.
10341. Arraiano LS, Chartrain L, Bossolini E, Slatter HN, Keller B & Brown JKM 2007 A gene in European wheat cultivars for resistance to an African isolate of Mycosphaerella graminicola. Plant Pathology 56: 73-78.
10342. Miranda LM, Murphy JP, Marshall D, Cowger C & Leath S 2007 Chromosomal location of Pm35, a novel Aegilops tauschii derived powdery mildew resistance gene introgressed into common wheat (Triticum aestivum L.). Theoretical & Applied Genetics 114: 1451-1456.
10343. Williams KJ, Willsmore KL, Olson S, Matic M & Kuchel H 2006 Mapping of a novel QTL for resistance to cereal cyst nematode in wheat. Theoretical & Applied Genetics 112: 1480-1486.
10344. Singh PK, Gonzalez-Hernandez JL, Mergoum M, Ali S, Adhikari TB, Kianian SF, Elias EM &Hughes GR. 2006 Identification and molecular mapping of a gene conferring resistance to Pyrenophora tritici-repentis race 3 in tetraploid wheat. Phytopathology 96: 885-889.
10345. Pathan AK & Park RF 2006 Evaluation of seedling and adult plant resistance to leaf rust in European wheat cultivars. Euphytica 149: 327-342.
10346. Long DL, Leonard KJ & Roberts JJ 1998 Virulence and diversity of wheat leaf rust in the United States in 1993 to 1995. Plant Disease 82: 1391-1400.
10347. Cowling SG, Brule-Babel AL, Somers DJ & Lamari L 2006 Identification and mapping of Stb13, an isolate-specific wheat resistance gene to isolate MG96-36 (group 1) of Mycosphaerella graminicola. Manuscript.
10348. Brule-Babel AL 2007 Personal communication 2007.
10349. Mardi M, Pazouki L, Delavar H, Kazemi MB, Ghareyazie B, Steiner B, Nolz R, Lemmens M & Buerstmeyr H 2006 QTL analysis of resistance to Fusarium head blight in wheat using a 'Frontana'-derived population. Plant Breeding 125: 313-317.
10350. Tadesse W, Hsam SLK & Zeller FJ 2006 Evaluation of common wheat cultivars for tan spot resistance and chromosomal location of a resistance gene in cultivar 'Salamouni'. Plant Breeding 125: 318-322.
10351. Houshmand D, Knox RE, Clarke FR & Clarke JM 2007 Molecular Breeding. On-line.
10352. Guan HT, Guo YH, Wang YB, Liu TG, Lin RM & Xu SC 2005 Microsatellite marker of the resistance gen YrSpP to wheat stripe rust. Sci Agric Sin 38: 1574-1577 (in Chinese).
10353. Gosal KS 2000 Aspects of Resistance to Wheat Stripe Rust in Australia. PhD Thesis, The University of Sydney.
10354. Zhou KJ, Wang SH, Feng YQ, Liu ZX & Wang GX 2006 The 4E-ms system of producing hybrid wheat. Crop Science 46: 250-255.
10355. Zhou KJ, Wang SH, Feng YQ, Ji WQ & Wang GX. 2006. Anew male sterile mutant in wheat (Triticum aestivum). Manuscript.
10356. Cenci A & Simeone R 2007 Personal communication.
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10358. Bovill WD, Ma W, Ritter K, Collard BCY, Davis M, Wildermuth GB & Sutherland MW 2006 Identification of novell QTL for resistance to crown rot in the doubled haploid wheat population 'W21MMT70' / 'Mendos'. Plant Breeding 125: 538-543.
10359. Das BK, Saini A, Bhagwat SG & Jawali N 2006 Development of SCAR markers for identification of stem rust resistance gene Sr31 in the homozygous or heterozygous condition in bread wheat. Plant Breeding 125: 544-549.
10360. Bougot Y, Lemoine J, Pavoine MT, Guyomar'ch H, Gautier V, Muranty H & Barloy D 2006 A major QTL effect controlling resistance to powdery mildew in winter wheat at the adult plant stage. Plant Breeding 125: 550-556.
10361. McCartney CA, Somers DJ, Lukow O, Ames N, Noll J, Cloutier S, Humphries DG & McCallum BD 2006 QTL analysis of quality traits in the spring wheat cross RL4452 x 'AC Domain'. Plant Breeding 125: 565-575.
10362. Watanabe N, Fujii Y, Takesada N & Martinek P 2006 Cytological and microsatellite mapping of the gene for brittle rachis in a Triticum aestivum-Aegilops tauschii introgression line. Euphytica 151: 63-68.
10363. Kumar N, Kulwal PL, Gaur A, Tyagi AK, Khurana JP, Khurana P, Balyan HS & Gupta PK 2006 QTL analysis for grain weight in common wheat. Euphytica 151: 235-144.
10364. Guo PG, Bai GH, Li RH, Shaner G & Baum M 2006 Resistance gene analogs associated with Fusarium head blight resistance in wheat. Euphytica 151: 251-261.
10365. Weng DX, Xu SC, Lin RM, Wan AM, Li JP & Wu LR 2005 Microsatellite marker kinked with stripe rust resistant gene Yr9 in wheat. Acta Genetica Sinica 32: 937-941 (In Chinese with English summary).
10366. Qiu YC, Sun XL, Zhou RH, Kong XY, Zhang SS & Jia JZ 2006 Identification of microsatellite markers linked to powdery mildew resistance gene Pm2 in wheat. Cereal Rersearch Communications 34: 1267-1273.
10367. Zhu ZD, Zhou RH, Kong XY, Dong YC & Jia JZ 2006 Microsatellite marker identification of a Triticum aestivum Aegilops umbellulata substitution line with powdery mildew resistance. Euphytica 150: 149-153.
10368. Gupta SK, Charpe A, Koul S, Haque QMR & Prabhu KV 2006 Development and validation of SCAR markers co-segregating with an Agropyron elongatum derived leaf rust resistance gene Lr24 in wheat. Euphytica 150: 233-240.
10369. Li ZF, Xia XC, Zhou XC, Niu YC, He ZH, Zhang Y, Li GQ, Wan AM, Wang DS, Chen XM, Lu QL & Singh RP 2006 Seedling and slow rusting resistance to stripe rust in Chinese common wheats. Plant Disease 90: 1302-1312.
10370. Wang YB, Xu SC, Xu Z, Liu TG & Lin RM 2006 A microsatellite marker linked to the stripe rust resistance gene YrV23 in the wheat variety Vilmorin 23. Hereditas (Beijing) 28: 306-310 (In Chinese with English summary).
10371. Yao ZJ, Lin RM, Xu SC, Li ZF, Wan AM & Ma ZY 2006 The molecular tagging of the yellow rust resistance gene Yr7 in wheat transferred from differential host Lee using microsatellite markers. Scientia Agricultura Sinica 39: 1146-1152 (In Chinese with English summary).
10372. Perugini L et al 2007 Paper in preparation. Copy of a conference submission provided.
10373. Spielmeyer W 2007 Personal communication.
10374. Spielmeyer W, McIntosh RA, Kolmer J & Lagudah ES 2005 Powdery mildew reaction and Lr34/Yr18 genes for adult plant resistance to leaf rust and stripe rust cosegregate at a locus on the short arm of chromosome 7D of wheat. Theoretical & Applied Genetics 111: 731-735.
10375. Kuraparthy V et al. 2007 Draft manuscript.
10376. Singh PK & Hughes GR 2006 Inheritance of resistance to the chlorosis component of tan spot of wheat caused by Pyrenophora tritici-repentis, races 1 and 3. Euphytica 152: 413-420.
10377. Kottearachchi NS, Uchino N & Kato K 2007 Increased grain dormancy in white-grained wheat by introgression of preharvest grain dormancy QTLs. Euphytica 152: 421-428.
10378. Khlestkina EK, Pshenichnikova TA, Roder MS, Salina EA, Arbuzova EA & Borner A 2006 Comparative mapping of genes for glume colouration and pubescence in hexaploid wheat (Triticum aestivum). Theoretical & Applied Genetics 113: 801-807.
10379. Gupta SK, Charpe A, Prabhu KV & Haque QMR 2006 Identification and validation of molecular markers linked to the leaf rust resistance gene Lr19 in wheat. Theoretical & Applied Genetics 113: 1027-1036.
10380. Bossolini E, Krattinger SG & Keller B 2006 Development of simple sequence repeat markers specific for the Lr34 resistance region of wheat using sequence information from rice and Aegilops tauschii. Theoretical & Applied Genetics 113: 1049-1062.
10381. Zhao HX, Liu XM & Chen M-S 2006 H22, a major resistance gene to the Hessian fly (Mayetiola destructor), is mapped to the distal region of chromosome 1DS. Theoretical & Applied Genetics 113: 1491-1496.
10382. Kuchel H, Hollamby G, Langridge P, Williams K Jefferies SP 2006 Identification of genetic loci associated with ear-emergence in bread wheat. Theoretical & Applied Genetics 113: 1103-1112.
10383. Khleskina EK, Roder MS, Unger O, Meinel A & Borner A 2007 More precise map position and origin of a durable non-specific adult plant disease resistance against stripe rust (Puccinia striiformis) in wheat. Euphytica 153: 1-10.
10384. Ma LQ, Zhou EF, Huo NX, Zhou RH, Wang GY & Jia JZ 2007 Genetic analysis of salt tolerance in a recombinant inbred population of wheat (Triticum aestivum L.). Euphytica 153: 109-117.
10385. Sun DJ, He ZH, Xia XC, Zhang LP, Morris CF, Appels, Ma WJ & Wang W 2005 A novel STS marker for polyphenol oxidase activity in bread wheat. Molecular Breeding 16: 209-218.
10386. He XY, He ZH, Zhang LP, Sun DJ, Morris CF, Fuerst EP & Xia XC 2007 Allelic variation of polyphenol oxidase (PPO) genes located on chromosomes 2A and 2D and development of functional markers for the PPO genes in common wheat. Submitted.
10387. Lagudah ES, McFadden H, Singh RP, Huerta-Espino, Bariana HS & Spielmeyer W 2006 Molecular genetic characterization of the Lr34/Yr18 slow rusting resistance gene region in wheat. Theoretical & Applied Genetics 114: 21-30.
10388. Wang T, Xu SS, Harris MO, Hu JG, Liu LW & Cai XW 2006 Genetic characterization and molecular mapping of Hessian fly resistance genes derived from Aegilops tauschii in synthetic wheat. Theoretical & Applied Genetics 113: 611-618.
10389. Zhou RH, Zhu ZD, Kong XY, Huo NX, Tian QZ, Li P, Jin CY, Dong YC & Jia JZ 2006 Development of wheat near-isogenic lines for powdery mildew resistance. Theoretical & Applied Genetics 110: 640-648.
10390. Janni M, Di Giovanni M, Roberti S, Capododicasa C & D'Ovidio R 2006 Characterization of expressed Pgip genes in rice and wheat reveals similar extent of sequence variation to dicot PGIPs and identifies an active PGIP lacking an entire LRR repeat. Theoretical & Applied Genetics 113: 1233-1245.
10391. Li G, He Z, Lillemo M, Sun Q & Xia X 2007 Molecular characterization of allelic variations at Pina and Pinb loci in Shandong wheat landraces, historical and current cultivars. Journal of Cereal Science (submitted).
10392. Dobrovolskaya O, Arbuzova VS, Lohwasser U, Roder MS & Borner A 2006 Microsatellite mapping of complementary genes for purple grain colour in bread wheat (Triticum aestivum L.). Euphytica 150: 355-364.
10393. Yao GQ, Zhang JL, Yang LL, Xu HX, Jiang YM, Xiong L, Zhang CQ, Zhang ZZ, Ma ZQ & Sorrells ME 2007 Genetic mapping of two powdery mildew resistance genes in einkorn (Triticum monococcum L.) accessions. Theoretical & Applied Genetics 114: 351-358.
10394. Tadesse W, Hsam SLK, Wenzel G & Zeller FJ 2006 Identification and monosomic analysis of tan spot resistance genes in synthetic wheat lines (Triticum turgidum L. x Aegilops tauschii Coss.). Crop Science 46: 1212-1217.
10395. Lanning SP, Fox P, Elser J, Martin JM, Blake NK & Talbert LE 2006 Microsatellite markers associated with a secondary stem solidness locus in wheat. Crop Science 46: 1701-1703.
10396. Heyns I, Groenewald E, Marais F, du Toit F & Tolmay V 2006 Chromosomal location of the Russian wheat aphid resistance gene Dn5. Crop Science 46: 630-636.
10397. Jyoti JL, Qureshi JA, Michaud JP & Matin TJ 2006 Virulence of two Russian wheat aphid biotypes to eight wheat cultivars at two temperatures. Crop Science 46: 774-780.
10398. Berzonsky WA, Gebhard BL, Gamotin E, Leach GD & Ali S 2007 A reciprocal monosomic analysis of the scab resistant spring wheat (Triticum aestivum L.) cultivar 'Frontana'. Plant Breeding 126: 234-239.
10399. Marais GF et al. 2007 A wheat leaf rust resistance gene derived from Aegilops peregrina. Draft manuscript.
10400. Hiebert C 2007 Personal communication.
10401. Kumar S, Stack RW, Friesen TL & Faris JD 2007 Identification of a novel Fusarium head blight resistance quantitative locus on chromosome 7A in tetraploid wheat. Phytopathology 97: 592-597.
10402. Otto CD, Kianian SF, Elias E, Stack RW & Joppa LR 2002 Genetic dissection of a major QTL in tetraploid wheat. Plant Molecular Biology 48: 625-632.
10403. Liu SX, Zhang XL, Pumphhrey O, Stack RW, Gill BS & Anderson JA 2006 Complex micrcolinearity among wheat, rice, and barley revealed by fine mapping of the genomic region harboring a major QTL for resistance to Fusarium head blight in wheat. Functional & Integrative Genomics 6: 83-89.
10404. Nalini E, Ghagwat SG & Jawali N 2005 Validation of allele specific primers for identification of Rht genes among Indian bread wheat varieties. Cereal Research Communications 33: 439-446.
10405. Tommasini L, Yahiaoui N, Srichumpa P & Keller B 2006 Development of functional markers specific for seven Pm3 resistance alleles and their validation in the bread wheat gene pool. Theoretical & Applied Genetics 114: 165-175.
10406. Yahiaoui N, Brunner S & Keller B 2006 Rapid generation of new powdery mildew resistance genes after wheat domestication. The Plant Journal 47: 85-98.
10407. Dudnikov AJu 2007 An acid phosphatase gene set (Acph-2) of common wheat orthologous to Acph1 of Aegilops tauschii (0780). Cereal Research Communications 35: 11-13.
10408. Qiu JW, Schurch AC, YahiaouinN, Dong LL, Fan HJ, Zhang ZJ, Keller B & Ling HQ 2007 Physical mapping and identification of a candiadate for the leaf rust resistance gene Lr1 of wheat. Theoretical & Applied Genetics 115: 159-168.
10409. Johnson JC, Appels R & Bhave M 2006 The PDI genes of wheat and their syntenic relationship to the esp2 locus of rice. Functional & Integrative Genomics 6: 104-121.
10410. Raman R, Raman H, Johnstone K, Lisle C, Smith A, Martin P & Allen H 2005 Genetic and in silico comparative mapping of the polyphenol oxidase gene in bread wheat (Triticum aestivum L.). Functional & Integrative Genomics 5: 185-200.
10411. Simeone R, Pasquapone A, Clodeveo ML & Blanco A 2002 Genetic mapping of polyphenol oxidase in tetraploid durum wheat. Cellular and Molecular Biology Letters 7: 763-769.
10412. Watanabe N, Masum Akond ASMG & Nachit M 2006 Genetic mapping of the gene affecting polyphenol oxidase activity in tetraploid durum wheat. Journal of Applied Genetics 47: 201-205.
10413. Lu HJ & Faris JD 2006 Macro- and microcolinearity between the genomic region of wheat chromosome 5B containing the Tsn1 gene and the rice genome. Functional & Integrative Genomics 6: 90-103.
10414. Baga M, Chodaparambil SV, Limin AE, Pecar M, Fowler DB & Chibbar 2007 Identification of quantitative trait loci and associated candidate genes for low-temperature tolerance in cold-hardy winter wheat. Functional & Integrative Genomics 7: 53-68.
10415. Gill BS, Friebe B, Raupp WJ, Wilson DL, Cos TS, Sears RG, Brown-Guedira G & Fritz AK 2006 Wheat Genetics Resource Center: The first 25 years. Advances in Agronomy 89: 73-136.
10416. Lin F & Chen XM 2007 Genetics and molecular mapping of genes for race- specific and all-stage resistance and non-specific high-temperature adult-plant resistance to stripe rust in spring wheat cultivar Alpowa. Theoretical & Applied Genetics 114: 1277-1287.
10417. Nakamura S, Komatsuda T & Miura H 2007 Mapping diploid wheat homologues of Arabidopsis seed ABA signaling genes for seed dormancy. Theoretical & Applied Genetics 114: 1129-1139.
10418. He XY, He ZH, Zhang LP, Sun DJ, Morris CF, Fuerst EP & Xia XC 2007 Allelic variation of polyphenol oxidase (PPO) genes located on Chromosomes 2A and 2D and development of functional markers for the PPO genes in common wheat. Theoretical & Applied Genetics 115: 47-58.
10419. Tadesse W, Schmolke M, Hsam SLK, Mohler V, Wenzel G & Zeller FJ 2007 Molecular mapping of resistance genes to tan spot [Pyrenophora tritici-repentis] in synthetic wheat lines. Theoretical & Applied Genetics 114: 855-862.
10420. Huang L, Brooks SA, Li WL, Fellers JP, Trick HN & Gill BS 2003 Map-based cloning of leaf rust resistance gene Lr21 from the large and polyploid genome of bread wheat. Genetics 164: 655-664.
10421. Yan L, Fu D, Li C, Blechl A, Tranquilli G, Bonafede M, Sanchez A, Valarik M & Dubcovsky J 2006 The wheat and barley vernalization gene VRN3 is an orthologue of FT. Proceedings National Academy of Sciences USA 103: 19581-19586.
10422. Ciaffi M, Dominici L, Tanzarella OA & Porceddu E 1999 Chromosomal assignment of gene sequences coding for protein disulphide isomerase (PDI) in wheat. Theoretical and Applied Genetics 98: 405-410.
10423. Ciaffi M, Paolacci AR, D'Aloisio E, Tanzarella OA & Porceddu E 2006 Cloning and characterization of wheat PDI (protein disulfide isomerase) homoeologous genes and promoter sequences. Gene 366: 209-218.
10424. Johnson JC & Bhave M 2004 Molecular characterisation of the protein disulphide isomerase genes of wheat. Plant Science 167: 397-410.
10425. Tohver M, Kann A, Täht R, Mihhalevski A & Hakman J 2005 Quality of triticale cultivars suitable for growing and bread-making in northern conditions. Food Chemistry 89: 125-132.
10426. Zhang Y, Li Q, Yan Y, Zheng J, An X, Xiao Y, Wang A, Pei Y, Wang H, Hsam SLK & Zeller FJ 2006 Molecular characterization and phylogenetic analysis of a novel glutenin gene (Dy10.1^t) from Aegilops tauschii. Genome 49: 735-745.
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V. CATALOGUE OF GENE SYMBOLS FOR WHEAT: 2007 Supplement. R.A. McIntosh 1, K.M. Devos 2, J. Dubcovsky 3, W.J. Rogers 4, C.F. Morris 5, R. Appels 6, D.J. Somers 7, and O.A. Anderson 8.