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GrainGenes Locus Report: EBmac0824

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Locus
EBmac0824  [ Marker Report ]
Type
Microsatellite
Synonym
SynonymEBmac824
Chromosome
5H
Map
Barley, B73xCPI-5H128.3
[ Show all 8 ]
[ Show Nearby Loci ]
In QTL
QHea.pil-5H.3
[ Show all 9 ]
Map Data
Barley, Abiotic QTL Consensus
[ Show all 8 ]
Species
Hordeum spontaneum
Hordeum vulgare
Probe
EBmac0824
EBmac824
Reference
ReferenceVarshney RK et al. (2007) A high density barley microsatellite consensus map with 775 SSR loci. Theoretical and Applied Genetics 114:1091.
ReferenceRostoks N et al. (2005) Genome-wide SNP discovery and linkage analysis in barley based on genes responsive to abiotic stress. Molecular Genetics and Genomics 274:515-527.
ReferenceRamsay L et al. (2000) A simple sequence repeat-based linkage map of barley Genetics 156:1997-2005.
Remark
Locus in 'Barley, Consensus 2007, SSR' mapped in population(s) : Lina x H. spontaneum
Insert contains repeat (TG)4,(TG)4,(TG)4, (GT)4,(GT)4
Polymorphic Information Content (PIC) = 0.43
Developing laboratory = SCRI (R. Waugh)
Possible Orthologs
{mac824}EBmac824