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GrainGenes Marker Report: Xbcd1237

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Locus
Xbcd1237
Type
RFLP
Map
Avena-Sorrells-B15.4
Oat-KxO-99.2
Oat-KxO/Q-99.2
[ Show Nearby Loci ]
QTL with Locus Marker
Groat percentage, KxO-9
Height, KxO-9-a
Map Data
Diploid Oat, Cornell2
Oat, KxO
Oat, KxO/QTL
Probe
BCD1237
Homology
T05095e-value: 9e-34hypothetical protein F28M20.60 - Arabidopsis thaliana
NP_013001.1e-value: 1.4Ykr075cp [Saccharomyces cerevisiae]
NP_013001.1e-value: 2.6Ykr075cp [Saccharomyces cerevisiae]
Image
BCD1237 KO autoradiogram
Possible Orthologs
bcd1237
BCD1237



Probe for Locus
BCD1237
Locus
Xbcd1237
bcd1237
BCD1237
Synonym
SynonymHAR35_17845
HAR35_17846
HAR35_47560
Reference
ReferenceHeun M et al. (1991) Construction of a restriction fragment length polymorphism map for barley (Hordeum vulgare) Genome 34:437-447.
General Remarks
Lambda ZAP II library
Type
cDNA
Sequence
BE438655
BE438717
BE438808
BCD1237_WHE1H0112
BCD1237_WHE1H0111
Polymorphism
BCD1237 EcoRI
Source Species
Hordeum vulgare
Source Germplasm
Willis
Source Tissue
etiolated leaf
PCR size
1
Clone Vector
pBluSK
Excision Enzyme
EcoRI
Vector PCR primers
M13forward
M13reverse
Vector Amplification
94 C for 78 sec, 50 C 78 sec, 72 C 120 sec, 25 times; 94 C for 78 sec, 50 C 78 sec, 72 C 5 min, 1 time
Antibiotic
Ampicillin
Clone Location
Sorrells, Mark E.
GrainGenes Probe Repository
Clone Authority
Sorrells, Mark E.
Image
BCD1237 KO autoradiogram
Data Source
Sorrells, Mark E.96.07